Protein–RNA interactions for Protein: Q8CEI3

Ccdc28a, Coiled-coil domain-containing 28A, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28aQ8CEI3 Gm42975-201ENSMUST00000200612 1491 ntBASIC7.1□□□□□ -1.27
Ccdc28aQ8CEI3 Spire1-202ENSMUST00000082243 4950 ntAPPRIS ALT2 TSL 1 (best) BASIC7.1□□□□□ -1.27
Ccdc28aQ8CEI3 Vmn1r86-203ENSMUST00000227220 6445 ntAPPRIS P2 BASIC7.1□□□□□ -1.27
Ccdc28aQ8CEI3 Gm29825-201ENSMUST00000214237 3775 ntTSL 5 BASIC7.1□□□□□ -1.27
Ccdc28aQ8CEI3 Trappc8-201ENSMUST00000025177 5178 ntAPPRIS ALT2 TSL 5 BASIC7.1□□□□□ -1.27
Ccdc28aQ8CEI3 Ifi207-201ENSMUST00000042610 3422 ntAPPRIS P2 TSL 5 BASIC7.1□□□□□ -1.27
Ccdc28aQ8CEI3 Med23-202ENSMUST00000092646 5098 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Ccdc28aQ8CEI3 Gm44417-201ENSMUST00000203298 3359 ntBASIC7.09□□□□□ -1.27
Ccdc28aQ8CEI3 Gm26530-201ENSMUST00000180969 3941 ntTSL 5 BASIC7.09□□□□□ -1.27
Ccdc28aQ8CEI3 Gm42613-201ENSMUST00000199975 1931 ntBASIC7.09□□□□□ -1.27
Ccdc28aQ8CEI3 Adgrg6-203ENSMUST00000208429 3582 ntAPPRIS ALT2 TSL 5 BASIC7.09□□□□□ -1.27
Ccdc28aQ8CEI3 Hormad1-201ENSMUST00000029754 1385 ntAPPRIS ALT2 TSL 1 (best) BASIC7.09□□□□□ -1.27
Ccdc28aQ8CEI3 AC091783.1-201ENSMUST00000223614 1613 ntBASIC7.09□□□□□ -1.27
Ccdc28aQ8CEI3 Vangl1-202ENSMUST00000159388 3207 ntTSL 5 BASIC7.09□□□□□ -1.27
Ccdc28aQ8CEI3 Olfr43-204ENSMUST00000215550 1854 ntAPPRIS P1 TSL 3 BASIC7.09□□□□□ -1.27
Ccdc28aQ8CEI3 Gm29502-201ENSMUST00000185979 3739 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Ccdc28aQ8CEI3 Mylk4-201ENSMUST00000057428 5571 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.27
Ccdc28aQ8CEI3 Pecam1-204ENSMUST00000106796 3441 ntAPPRIS ALT2 TSL 1 (best) BASIC7.09□□□□□ -1.27
Ccdc28aQ8CEI3 Kmt2c-201ENSMUST00000045291 14967 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.27
Ccdc28aQ8CEI3 Cntnap5a-201ENSMUST00000043725 10945 ntAPPRIS P1 TSL 2 BASIC7.09□□□□□ -1.27
Ccdc28aQ8CEI3 Gm12299-201ENSMUST00000138819 2327 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Ccdc28aQ8CEI3 Olfr1348-210ENSMUST00000214383 2582 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.27
Ccdc28aQ8CEI3 Vmn2r111-201ENSMUST00000092491 2574 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Ccdc28aQ8CEI3 Igkv12-38-201ENSMUST00000103371 344 ntAPPRIS ALT2 BASIC7.09□□□□□ -1.27
Ccdc28aQ8CEI3 Ighv1-53-201ENSMUST00000103523 351 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
Ccdc28aQ8CEI3 Ighv1-69-201ENSMUST00000103539 348 ntAPPRIS ALT2 BASIC7.09□□□□□ -1.27
Ccdc28aQ8CEI3 Gm22707-201ENSMUST00000103834 110 ntBASIC7.09□□□□□ -1.27
Ccdc28aQ8CEI3 Mageb8-ps-201ENSMUST00000117228 1033 ntBASIC7.09□□□□□ -1.27
Ccdc28aQ8CEI3 Gm12219-201ENSMUST00000119198 443 ntBASIC7.09□□□□□ -1.27
Ccdc28aQ8CEI3 Gm9439-201ENSMUST00000119554 973 ntBASIC7.09□□□□□ -1.27
Ccdc28aQ8CEI3 Gm13486-201ENSMUST00000119910 282 ntBASIC7.09□□□□□ -1.27
Ccdc28aQ8CEI3 4933411O13Rik-203ENSMUST00000146849 607 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Ccdc28aQ8CEI3 Galnt5-203ENSMUST00000166729 3812 ntAPPRIS P1 TSL 2 BASIC7.09□□□□□ -1.27
Ccdc28aQ8CEI3 Gm9047-201ENSMUST00000171317 682 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Ccdc28aQ8CEI3 Gm5787-201ENSMUST00000183049 1038 ntBASIC7.09□□□□□ -1.27
Ccdc28aQ8CEI3 Chil5-203ENSMUST00000200146 1296 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.27
Ccdc28aQ8CEI3 Gm43812-202ENSMUST00000202701 581 ntBASIC7.09□□□□□ -1.27
Ccdc28aQ8CEI3 Olfr1509-203ENSMUST00000206100 1161 ntAPPRIS P1 TSL 3 BASIC7.09□□□□□ -1.27
Ccdc28aQ8CEI3 Gm44577-201ENSMUST00000207413 1284 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Ccdc28aQ8CEI3 Gm45514-201ENSMUST00000211531 689 ntBASIC7.09□□□□□ -1.27
Ccdc28aQ8CEI3 Gm35998-201ENSMUST00000212862 838 ntTSL 5 BASIC7.09□□□□□ -1.27
Ccdc28aQ8CEI3 Gm18914-201ENSMUST00000214625 616 ntBASIC7.09□□□□□ -1.27
Ccdc28aQ8CEI3 Olfr809-203ENSMUST00000218237 1100 ntBASIC7.09□□□□□ -1.27
Ccdc28aQ8CEI3 AC160112.1-201ENSMUST00000219139 714 ntBASIC7.09□□□□□ -1.27
Ccdc28aQ8CEI3 AC153821.2-201ENSMUST00000220253 468 ntTSL 5 BASIC7.09□□□□□ -1.27
Ccdc28aQ8CEI3 CT030175.1-201ENSMUST00000220822 408 ntBASIC7.09□□□□□ -1.27
Ccdc28aQ8CEI3 AC154834.1-201ENSMUST00000224697 358 ntBASIC7.09□□□□□ -1.27
Ccdc28aQ8CEI3 Olfr809-201ENSMUST00000059891 1100 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
Ccdc28aQ8CEI3 Rpl31-ps20-201ENSMUST00000080982 378 ntBASIC7.09□□□□□ -1.27
Ccdc28aQ8CEI3 Gm40893-201ENSMUST00000220507 1508 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Ccdc28aQ8CEI3 Rrh-201ENSMUST00000029648 1506 ntAPPRIS ALT2 TSL 1 (best) BASIC7.09□□□□□ -1.27
Ccdc28aQ8CEI3 Gm30075-201ENSMUST00000205509 3005 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Ccdc28aQ8CEI3 Tnfsf10-201ENSMUST00000046383 4993 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Ccdc28aQ8CEI3 3000002C10Rik-203ENSMUST00000144161 3977 ntTSL 2 BASIC7.09□□□□□ -1.27
Ccdc28aQ8CEI3 AC130217.2-201ENSMUST00000224009 2990 ntBASIC7.09□□□□□ -1.27
Ccdc28aQ8CEI3 Gm44039-201ENSMUST00000204192 2246 ntBASIC7.09□□□□□ -1.27
Ccdc28aQ8CEI3 Zwint-202ENSMUST00000105431 2676 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Ccdc28aQ8CEI3 Vmn2r55-201ENSMUST00000167771 1407 ntTSL 5 BASIC7.09□□□□□ -1.28
Ccdc28aQ8CEI3 Lipk-201ENSMUST00000054260 2125 ntTSL 1 (best) BASIC7.09□□□□□ -1.28
Ccdc28aQ8CEI3 Psg21-201ENSMUST00000094793 2074 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Ccdc28aQ8CEI3 Ogdh-202ENSMUST00000081894 4114 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Ccdc28aQ8CEI3 AC156636.2-201ENSMUST00000218845 4557 ntBASIC7.08□□□□□ -1.28
Ccdc28aQ8CEI3 Gm45786-201ENSMUST00000213021 2278 ntBASIC7.08□□□□□ -1.28
Ccdc28aQ8CEI3 AC154597.1-201ENSMUST00000224095 2713 ntBASIC7.08□□□□□ -1.28
Ccdc28aQ8CEI3 Csde1-206ENSMUST00000197488 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC7.08□□□□□ -1.28
Ccdc28aQ8CEI3 Cbll1-202ENSMUST00000085487 1332 ntTSL 5 BASIC7.08□□□□□ -1.28
Ccdc28aQ8CEI3 Olfr167-202ENSMUST00000214315 7435 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
Ccdc28aQ8CEI3 Gm43029-201ENSMUST00000201829 1535 ntBASIC7.08□□□□□ -1.28
Ccdc28aQ8CEI3 Klkb1-201ENSMUST00000026907 5249 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Ccdc28aQ8CEI3 Ptprd-213ENSMUST00000173376 4793 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Ccdc28aQ8CEI3 Trrap-201ENSMUST00000038980 12344 ntAPPRIS ALT2 TSL 5 BASIC7.08□□□□□ -1.28
Ccdc28aQ8CEI3 Gm15348-201ENSMUST00000151188 3655 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Ccdc28aQ8CEI3 Ppargc1a-203ENSMUST00000132734 6464 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Ccdc28aQ8CEI3 CT010577.1-202ENSMUST00000226187 1903 ntBASIC7.08□□□□□ -1.28
Ccdc28aQ8CEI3 Gm12075-201ENSMUST00000117426 397 ntBASIC7.08□□□□□ -1.28
Ccdc28aQ8CEI3 Tm6sf1-202ENSMUST00000119543 1066 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Ccdc28aQ8CEI3 Gm11259-201ENSMUST00000120554 715 ntBASIC7.08□□□□□ -1.28
Ccdc28aQ8CEI3 Gm2888-202ENSMUST00000178577 618 ntAPPRIS ALT2 TSL 5 BASIC7.08□□□□□ -1.28
Ccdc28aQ8CEI3 Gm29349-201ENSMUST00000188692 174 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Ccdc28aQ8CEI3 Gm37383-201ENSMUST00000191750 745 ntBASIC7.08□□□□□ -1.28
Ccdc28aQ8CEI3 Gm3103-201ENSMUST00000198073 752 ntBASIC7.08□□□□□ -1.28
Ccdc28aQ8CEI3 1700040L08Rik-201ENSMUST00000205011 541 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Ccdc28aQ8CEI3 Gm45122-201ENSMUST00000206376 784 ntBASIC7.08□□□□□ -1.28
Ccdc28aQ8CEI3 Gm35501-201ENSMUST00000213492 783 ntTSL 2 BASIC7.08□□□□□ -1.28
Ccdc28aQ8CEI3 Akr1c21-201ENSMUST00000021628 1207 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Ccdc28aQ8CEI3 AC132954.2-201ENSMUST00000222400 403 ntBASIC7.08□□□□□ -1.28
Ccdc28aQ8CEI3 Lalba-201ENSMUST00000023726 771 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Ccdc28aQ8CEI3 Gm28392-201ENSMUST00000077630 393 ntBASIC7.08□□□□□ -1.28
Ccdc28aQ8CEI3 Gpr87-203ENSMUST00000200095 1499 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Ccdc28aQ8CEI3 Ctps2-202ENSMUST00000101095 1665 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Ccdc28aQ8CEI3 Ugt2b38-201ENSMUST00000072818 1891 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Ccdc28aQ8CEI3 Fam107a-203ENSMUST00000121887 3333 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Ccdc28aQ8CEI3 Lgi1-209ENSMUST00000199812 2262 ntTSL 5 BASIC7.08□□□□□ -1.28
Ccdc28aQ8CEI3 Cenpw-202ENSMUST00000216853 4143 ntAPPRIS ALT1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Ccdc28aQ8CEI3 BC053393-201ENSMUST00000050937 2020 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Ccdc28aQ8CEI3 Rbms3-205ENSMUST00000111772 2234 ntAPPRIS ALT2 TSL 1 (best) BASIC7.08□□□□□ -1.28
Ccdc28aQ8CEI3 Ssbp1-202ENSMUST00000114779 4398 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Ccdc28aQ8CEI3 4931406B18Rik-201ENSMUST00000013497 3970 ntAPPRIS P2 TSL 1 (best) BASIC7.08□□□□□ -1.28
Ccdc28aQ8CEI3 Olfr1232-203ENSMUST00000215679 2389 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
Ccdc28aQ8CEI3 Gm15509-201ENSMUST00000162615 2162 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Retrieved 100 of 76,532 protein–RNA pairs in 67.6 ms