Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Zfp790-201ENSMUST00000032796 3376 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
Col6a6Q8C6K9 Smpd4-204ENSMUST00000163476 4532 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
Col6a6Q8C6K9 Deptor-202ENSMUST00000096433 8547 ntAPPRIS P4 TSL 1 (best) BASIC6.21□□□□□ -1.41
Col6a6Q8C6K9 Vmn2r12-201ENSMUST00000095922 2496 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.41
Col6a6Q8C6K9 AC154806.2-201ENSMUST00000227212 2385 ntBASIC6.21□□□□□ -1.41
Col6a6Q8C6K9 Tdrd7-202ENSMUST00000107777 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.41
Col6a6Q8C6K9 6530403H02Rik-202ENSMUST00000182124 3191 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Col6a6Q8C6K9 Card6-201ENSMUST00000118365 5995 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
Col6a6Q8C6K9 Ugt1a6b-201ENSMUST00000113137 2249 ntAPPRIS P1 TSL 3 BASIC6.21□□□□□ -1.42
Col6a6Q8C6K9 Ehbp1-207ENSMUST00000180360 4971 ntAPPRIS P3 TSL 5 BASIC6.21□□□□□ -1.42
Col6a6Q8C6K9 Synj2-204ENSMUST00000115785 3778 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Col6a6Q8C6K9 Eci2-203ENSMUST00000110251 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
Col6a6Q8C6K9 Tra2b-201ENSMUST00000023564 1369 ntTSL 3 BASIC6.21□□□□□ -1.42
Col6a6Q8C6K9 Rapgef4os3-201ENSMUST00000132792 3485 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Col6a6Q8C6K9 AC153143.2-201ENSMUST00000220999 1804 ntBASIC6.21□□□□□ -1.42
Col6a6Q8C6K9 Gm8281-201ENSMUST00000100893 612 ntTSL 5 BASIC6.21□□□□□ -1.42
Col6a6Q8C6K9 Gm14893-201ENSMUST00000117904 282 ntBASIC6.21□□□□□ -1.42
Col6a6Q8C6K9 Gm13772-201ENSMUST00000118431 317 ntBASIC6.21□□□□□ -1.42
Col6a6Q8C6K9 Gm11107-201ENSMUST00000165414 505 ntBASIC6.21□□□□□ -1.42
Col6a6Q8C6K9 Gm20401-201ENSMUST00000173717 212 ntBASIC6.21□□□□□ -1.42
Col6a6Q8C6K9 Gm27512-201ENSMUST00000175328 126 ntBASIC6.21□□□□□ -1.42
Col6a6Q8C6K9 Gm8237-202ENSMUST00000178594 447 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
Col6a6Q8C6K9 Fabp9-202ENSMUST00000191678 647 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Col6a6Q8C6K9 Gm36793-201ENSMUST00000199211 922 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Col6a6Q8C6K9 Gm43846-201ENSMUST00000200502 932 ntBASIC6.21□□□□□ -1.42
Col6a6Q8C6K9 Gm44221-201ENSMUST00000203552 388 ntBASIC6.21□□□□□ -1.42
Col6a6Q8C6K9 4930434F21Rik-201ENSMUST00000214381 742 ntTSL 5 BASIC6.21□□□□□ -1.42
Col6a6Q8C6K9 AC132954.2-201ENSMUST00000222400 403 ntBASIC6.21□□□□□ -1.42
Col6a6Q8C6K9 CT025598.1-201ENSMUST00000225140 427 ntBASIC6.21□□□□□ -1.42
Col6a6Q8C6K9 Mir135a-1-201ENSMUST00000083473 90 ntBASIC6.21□□□□□ -1.42
Col6a6Q8C6K9 D6Wsu163e-201ENSMUST00000032497 2501 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Col6a6Q8C6K9 Pard3-220ENSMUST00000162456 3204 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Col6a6Q8C6K9 Rprd2-201ENSMUST00000090791 7756 ntAPPRIS P2 TSL 1 (best) BASIC6.21□□□□□ -1.42
Col6a6Q8C6K9 Gdpd4-202ENSMUST00000170049 1899 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
Col6a6Q8C6K9 Rpp40-201ENSMUST00000171686 4380 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Col6a6Q8C6K9 Tmem232-201ENSMUST00000062161 2665 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Col6a6Q8C6K9 Adgrb3-201ENSMUST00000041838 5059 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Col6a6Q8C6K9 Clasp1-212ENSMUST00000189262 6918 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
Col6a6Q8C6K9 Rps15a-207ENSMUST00000172457 5130 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Col6a6Q8C6K9 Gpr165-201ENSMUST00000033554 3170 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Col6a6Q8C6K9 Plek-201ENSMUST00000020321 3896 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Col6a6Q8C6K9 Usp14-202ENSMUST00000116669 2019 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Col6a6Q8C6K9 Gm42669-202ENSMUST00000160160 3080 ntAPPRIS P1 TSL 2 BASIC6.21□□□□□ -1.42
Col6a6Q8C6K9 Hmgn5-201ENSMUST00000033597 1934 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Col6a6Q8C6K9 Zfp207-203ENSMUST00000108216 2152 ntTSL 2 BASIC6.21□□□□□ -1.42
Col6a6Q8C6K9 Olfr55-204ENSMUST00000216633 4758 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
Col6a6Q8C6K9 Ctnnd1-215ENSMUST00000111689 5961 ntTSL 5 BASIC6.21□□□□□ -1.42
Col6a6Q8C6K9 Gm10378-201ENSMUST00000100696 429 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Col6a6Q8C6K9 Il12a-202ENSMUST00000107816 1268 ntAPPRIS P2 TSL 1 (best) BASIC6.2□□□□□ -1.42
Col6a6Q8C6K9 Gm22275-201ENSMUST00000122470 310 ntBASIC6.2□□□□□ -1.42
Col6a6Q8C6K9 Gm7152-201ENSMUST00000163570 605 ntBASIC6.2□□□□□ -1.42
Col6a6Q8C6K9 Gm27018-201ENSMUST00000181136 225 ntBASIC6.2□□□□□ -1.42
Col6a6Q8C6K9 Gm28958-201ENSMUST00000185864 703 ntBASIC6.2□□□□□ -1.42
Col6a6Q8C6K9 Gm8190-201ENSMUST00000199603 586 ntBASIC6.2□□□□□ -1.42
Col6a6Q8C6K9 Zfp799-202ENSMUST00000201499 651 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Col6a6Q8C6K9 Gm7463-201ENSMUST00000201541 547 ntBASIC6.2□□□□□ -1.42
Col6a6Q8C6K9 Gm32983-201ENSMUST00000208500 505 ntBASIC6.2□□□□□ -1.42
Col6a6Q8C6K9 Gm2774-201ENSMUST00000213650 1165 ntBASIC6.2□□□□□ -1.42
Col6a6Q8C6K9 AL713985.1-201ENSMUST00000219030 420 ntBASIC6.2□□□□□ -1.42
Col6a6Q8C6K9 Gm3800-201ENSMUST00000221086 554 ntBASIC6.2□□□□□ -1.42
Col6a6Q8C6K9 Gm7995-201ENSMUST00000089789 429 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Col6a6Q8C6K9 Gm37962-201ENSMUST00000195535 2034 ntBASIC6.2□□□□□ -1.42
Col6a6Q8C6K9 Lrrc40-201ENSMUST00000072080 4142 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Col6a6Q8C6K9 Rfx4-203ENSMUST00000095388 3274 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Col6a6Q8C6K9 Gm13749-201ENSMUST00000133244 1432 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Col6a6Q8C6K9 Cast-202ENSMUST00000220738 1653 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Col6a6Q8C6K9 Dalir-201ENSMUST00000188773 2170 ntBASIC6.2□□□□□ -1.42
Col6a6Q8C6K9 Gm38386-201ENSMUST00000194293 3421 ntBASIC6.2□□□□□ -1.42
Col6a6Q8C6K9 Olfr1410-202ENSMUST00000216553 5433 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Col6a6Q8C6K9 Vmn2r114-201ENSMUST00000168033 2571 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Col6a6Q8C6K9 Gm43497-201ENSMUST00000201137 2316 ntBASIC6.2□□□□□ -1.42
Col6a6Q8C6K9 Trim43c-202ENSMUST00000186363 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
Col6a6Q8C6K9 Ppp2r3a-202ENSMUST00000075941 6786 ntTSL 5 BASIC6.2□□□□□ -1.42
Col6a6Q8C6K9 Pik3c2g-215ENSMUST00000218528 2712 ntTSL 5 BASIC6.2□□□□□ -1.42
Col6a6Q8C6K9 Gm38661-201ENSMUST00000216555 5814 ntTSL 5 BASIC6.2□□□□□ -1.42
Col6a6Q8C6K9 F13b-201ENSMUST00000027615 2379 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Col6a6Q8C6K9 Cbll1-203ENSMUST00000101499 3900 ntAPPRIS P2 TSL 1 (best) BASIC6.2□□□□□ -1.42
Col6a6Q8C6K9 Gm37534-201ENSMUST00000194483 5222 ntBASIC6.2□□□□□ -1.42
Col6a6Q8C6K9 Gm43099-201ENSMUST00000198943 5241 ntBASIC6.2□□□□□ -1.42
Col6a6Q8C6K9 Uba1y-201ENSMUST00000115894 3981 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Col6a6Q8C6K9 Gm19031-201ENSMUST00000176280 1365 ntBASIC6.2□□□□□ -1.42
Col6a6Q8C6K9 Olfr1350-203ENSMUST00000219278 1768 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Col6a6Q8C6K9 Asap1-206ENSMUST00000175799 4237 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
Col6a6Q8C6K9 Igkv4-79-201ENSMUST00000103342 358 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Col6a6Q8C6K9 Gm24069-201ENSMUST00000104512 127 ntBASIC6.2□□□□□ -1.42
Col6a6Q8C6K9 Gm25780-201ENSMUST00000122528 253 ntBASIC6.2□□□□□ -1.42
Col6a6Q8C6K9 Gm16093-201ENSMUST00000141455 392 ntTSL 5 BASIC6.2□□□□□ -1.42
Col6a6Q8C6K9 Tnfsf10-202ENSMUST00000174840 989 ntTSL 5 BASIC6.2□□□□□ -1.42
Col6a6Q8C6K9 Gm26509-201ENSMUST00000180947 948 ntBASIC6.2□□□□□ -1.42
Col6a6Q8C6K9 Gm29586-201ENSMUST00000185225 1104 ntTSL 5 BASIC6.2□□□□□ -1.42
Col6a6Q8C6K9 Gm28253-201ENSMUST00000186071 712 ntTSL 5 BASIC6.2□□□□□ -1.42
Col6a6Q8C6K9 Gm29178-203ENSMUST00000186312 1104 ntTSL 5 BASIC6.2□□□□□ -1.42
Col6a6Q8C6K9 Gm29624-202ENSMUST00000190185 1104 ntTSL 5 BASIC6.2□□□□□ -1.42
Col6a6Q8C6K9 Gm29179-209ENSMUST00000190621 1100 ntTSL 5 BASIC6.2□□□□□ -1.42
Col6a6Q8C6K9 Gm43383-201ENSMUST00000195981 469 ntBASIC6.2□□□□□ -1.42
Col6a6Q8C6K9 Gm6077-201ENSMUST00000196008 499 ntBASIC6.2□□□□□ -1.42
Col6a6Q8C6K9 4930555F03Rik-201ENSMUST00000033963 717 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Col6a6Q8C6K9 Gm42572-201ENSMUST00000202292 3378 ntBASIC6.2□□□□□ -1.42
Col6a6Q8C6K9 Naalad2-201ENSMUST00000001826 2831 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Col6a6Q8C6K9 Gm45182-201ENSMUST00000207579 2404 ntBASIC6.2□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 139.5 ms