Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Gm38661-201ENSMUST00000216555 5814 ntTSL 5 BASIC8.67□□□□□ -1.02
Trim47Q8C0E3 Epb41-201ENSMUST00000030739 6565 ntAPPRIS P3 TSL 5 BASIC8.67□□□□□ -1.02
Trim47Q8C0E3 Pecam1-203ENSMUST00000103069 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC8.67□□□□□ -1.02
Trim47Q8C0E3 Igkv1-117-201ENSMUST00000103317 404 ntAPPRIS P1 BASIC8.67□□□□□ -1.02
Trim47Q8C0E3 Rgs4-202ENSMUST00000111357 2575 ntTSL 5 BASIC8.67□□□□□ -1.02
Trim47Q8C0E3 Nif3l1-202ENSMUST00000114337 2168 ntTSL 2 BASIC8.67□□□□□ -1.02
Trim47Q8C0E3 Cbx3-204ENSMUST00000114446 1719 ntAPPRIS P1 TSL 5 BASIC8.67□□□□□ -1.02
Trim47Q8C0E3 Gm12344-201ENSMUST00000117087 329 ntBASIC8.67□□□□□ -1.02
Trim47Q8C0E3 Gm15010-201ENSMUST00000117153 407 ntBASIC8.67□□□□□ -1.02
Trim47Q8C0E3 Gm4919-201ENSMUST00000117825 604 ntBASIC8.67□□□□□ -1.02
Trim47Q8C0E3 Gm13526-201ENSMUST00000117970 189 ntBASIC8.67□□□□□ -1.02
Trim47Q8C0E3 Gm15789-201ENSMUST00000118992 1359 ntBASIC8.67□□□□□ -1.02
Trim47Q8C0E3 Fundc1-203ENSMUST00000142638 597 ntTSL 3 BASIC8.67□□□□□ -1.02
Trim47Q8C0E3 Chn1os3-201ENSMUST00000147420 2707 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Trim47Q8C0E3 Sumo2-207ENSMUST00000153892 1051 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Trim47Q8C0E3 Gm24198-201ENSMUST00000157812 108 ntBASIC8.67□□□□□ -1.02
Trim47Q8C0E3 Gm23079-201ENSMUST00000157847 117 ntBASIC8.67□□□□□ -1.02
Trim47Q8C0E3 Gm24854-201ENSMUST00000158025 98 ntBASIC8.67□□□□□ -1.02
Trim47Q8C0E3 Gm23117-201ENSMUST00000158482 108 ntBASIC8.67□□□□□ -1.02
Trim47Q8C0E3 Gm17078-201ENSMUST00000167617 668 ntAPPRIS P1 TSL 5 BASIC8.67□□□□□ -1.02
Trim47Q8C0E3 Zfp964-201ENSMUST00000169125 1416 ntTSL 3 BASIC8.67□□□□□ -1.02
Trim47Q8C0E3 Gm19705-201ENSMUST00000180495 496 ntTSL 5 BASIC8.67□□□□□ -1.02
Trim47Q8C0E3 Gm28469-201ENSMUST00000186374 2166 ntTSL 5 BASIC8.67□□□□□ -1.02
Trim47Q8C0E3 Gm28888-201ENSMUST00000186556 316 ntTSL 3 BASIC8.67□□□□□ -1.02
Trim47Q8C0E3 Gm29483-201ENSMUST00000188188 1078 ntTSL 3 BASIC8.67□□□□□ -1.02
Trim47Q8C0E3 Gm28134-201ENSMUST00000188690 2166 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Trim47Q8C0E3 Gm29263-201ENSMUST00000188718 463 ntBASIC8.67□□□□□ -1.02
Trim47Q8C0E3 Usp37-205ENSMUST00000189257 4974 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Trim47Q8C0E3 C430002N11Rik-204ENSMUST00000190054 443 ntTSL 3 BASIC8.67□□□□□ -1.02
Trim47Q8C0E3 Gm37756-201ENSMUST00000191834 942 ntTSL 3 BASIC8.67□□□□□ -1.02
Trim47Q8C0E3 Gm37075-201ENSMUST00000191888 2166 ntTSL 5 BASIC8.67□□□□□ -1.02
Trim47Q8C0E3 Gm36945-201ENSMUST00000192040 864 ntTSL 3 BASIC8.67□□□□□ -1.02
Trim47Q8C0E3 Gm37574-201ENSMUST00000194264 2166 ntTSL 5 BASIC8.67□□□□□ -1.02
Trim47Q8C0E3 Gm43063-201ENSMUST00000198198 1081 ntBASIC8.67□□□□□ -1.02
Trim47Q8C0E3 Gm43040-201ENSMUST00000202399 558 ntBASIC8.67□□□□□ -1.02
Trim47Q8C0E3 Lsm5-205ENSMUST00000203958 416 ntTSL 3 BASIC8.67□□□□□ -1.02
Trim47Q8C0E3 Klra13-ps-203ENSMUST00000204367 850 ntBASIC8.67□□□□□ -1.02
Trim47Q8C0E3 Olfr795-ps1-201ENSMUST00000205245 763 ntBASIC8.67□□□□□ -1.02
Trim47Q8C0E3 Gm44930-201ENSMUST00000207545 489 ntTSL 5 BASIC8.67□□□□□ -1.02
Trim47Q8C0E3 Gm18877-201ENSMUST00000207706 539 ntBASIC8.67□□□□□ -1.02
Trim47Q8C0E3 Efl1-206ENSMUST00000207868 1537 ntTSL 3 BASIC8.67□□□□□ -1.02
Trim47Q8C0E3 Gm42397-206ENSMUST00000208808 1358 ntTSL 5 BASIC8.67□□□□□ -1.02
Trim47Q8C0E3 Gm2516-201ENSMUST00000210011 954 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Trim47Q8C0E3 Gm5535-206ENSMUST00000210067 679 ntTSL 5 BASIC8.67□□□□□ -1.02
Trim47Q8C0E3 AC139376.1-201ENSMUST00000220056 1250 ntBASIC8.67□□□□□ -1.02
Trim47Q8C0E3 AC157017.1-201ENSMUST00000220148 364 ntBASIC8.67□□□□□ -1.02
Trim47Q8C0E3 Gm46323-201ENSMUST00000223136 628 ntTSL 5 BASIC8.67□□□□□ -1.02
Trim47Q8C0E3 AC163684.1-201ENSMUST00000223766 927 ntBASIC8.67□□□□□ -1.02
Trim47Q8C0E3 AC161374.1-201ENSMUST00000224191 794 ntBASIC8.67□□□□□ -1.02
Trim47Q8C0E3 AC129935.1-201ENSMUST00000226302 873 ntBASIC8.67□□□□□ -1.02
Trim47Q8C0E3 Vmn1r22-205ENSMUST00000228322 909 ntAPPRIS P1 BASIC8.67□□□□□ -1.02
Trim47Q8C0E3 Lipf-201ENSMUST00000025680 1411 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Trim47Q8C0E3 Scrg1-201ENSMUST00000034023 700 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Trim47Q8C0E3 Senp7-201ENSMUST00000049128 1190 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Trim47Q8C0E3 Defb34-201ENSMUST00000064475 246 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Trim47Q8C0E3 Olfr933-201ENSMUST00000075680 1003 ntAPPRIS P1 BASIC8.67□□□□□ -1.02
Trim47Q8C0E3 Gm24046-201ENSMUST00000083111 165 ntBASIC8.67□□□□□ -1.02
Trim47Q8C0E3 Pdlim5-203ENSMUST00000090134 1722 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Trim47Q8C0E3 Olfr894-201ENSMUST00000093866 949 ntAPPRIS P2 BASIC8.67□□□□□ -1.02
Trim47Q8C0E3 Paqr7-202ENSMUST00000095074 3550 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Trim47Q8C0E3 Olfr1282-201ENSMUST00000099618 918 ntAPPRIS P1 BASIC8.67□□□□□ -1.02
Trim47Q8C0E3 Dusp3-202ENSMUST00000107172 4445 ntAPPRIS P1 TSL 3 BASIC8.67□□□□□ -1.02
Trim47Q8C0E3 Ddr2-202ENSMUST00000170800 8289 ntAPPRIS P1 TSL 5 BASIC8.67□□□□□ -1.02
Trim47Q8C0E3 Ttc30a1-201ENSMUST00000099994 3721 ntAPPRIS P1 BASIC8.67□□□□□ -1.02
Trim47Q8C0E3 Large1-201ENSMUST00000004497 3669 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Trim47Q8C0E3 BC048644-201ENSMUST00000140928 3522 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Trim47Q8C0E3 Pkd1l1-203ENSMUST00000178195 6213 ntAPPRIS ALT2 TSL 5 BASIC8.67□□□□□ -1.02
Trim47Q8C0E3 AU015836-202ENSMUST00000121565 2997 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Trim47Q8C0E3 Tnfrsf11b-201ENSMUST00000079772 2818 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Trim47Q8C0E3 3830406C13Rik-201ENSMUST00000112669 2477 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Trim47Q8C0E3 3830406C13Rik-202ENSMUST00000163392 2452 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Trim47Q8C0E3 Ugt3a2-201ENSMUST00000072403 2329 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Trim47Q8C0E3 Gm16427-203ENSMUST00000201432 2042 ntAPPRIS P5 TSL 1 (best) BASIC8.66□□□□□ -1.02
Trim47Q8C0E3 1700017N19Rik-207ENSMUST00000190708 1945 ntAPPRIS P1 TSL 5 BASIC8.66□□□□□ -1.02
Trim47Q8C0E3 Platr30-202ENSMUST00000199348 1934 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Trim47Q8C0E3 Gm44777-202ENSMUST00000206492 1889 ntTSL 5 BASIC8.66□□□□□ -1.02
Trim47Q8C0E3 Tpx2-202ENSMUST00000109816 3483 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Trim47Q8C0E3 Gm33843-201ENSMUST00000219313 1637 ntTSL 5 BASIC8.66□□□□□ -1.02
Trim47Q8C0E3 Lbhd1-202ENSMUST00000187504 3164 ntAPPRIS P1 TSL 3 BASIC8.66□□□□□ -1.02
Trim47Q8C0E3 AC159264.1-202ENSMUST00000224856 3162 ntBASIC8.66□□□□□ -1.02
Trim47Q8C0E3 Mpdz-216ENSMUST00000220807 6295 ntAPPRIS ALT2 TSL 5 BASIC8.66□□□□□ -1.02
Trim47Q8C0E3 Pdzd2-201ENSMUST00000075317 10756 ntAPPRIS P1 TSL 5 BASIC8.66□□□□□ -1.02
Trim47Q8C0E3 Gm37739-201ENSMUST00000191742 1505 ntTSL 5 BASIC8.66□□□□□ -1.02
Trim47Q8C0E3 Gm38003-201ENSMUST00000191968 1504 ntTSL 5 BASIC8.66□□□□□ -1.02
Trim47Q8C0E3 Lipt1-201ENSMUST00000041621 1485 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Trim47Q8C0E3 Gm43609-201ENSMUST00000199084 2712 ntBASIC8.66□□□□□ -1.02
Trim47Q8C0E3 Gmfg-202ENSMUST00000108289 477 ntTSL 3 BASIC8.66□□□□□ -1.02
Trim47Q8C0E3 Gm7974-201ENSMUST00000117154 408 ntBASIC8.66□□□□□ -1.02
Trim47Q8C0E3 Gm15779-201ENSMUST00000117470 412 ntBASIC8.66□□□□□ -1.02
Trim47Q8C0E3 Gm15094-201ENSMUST00000118394 1131 ntBASIC8.66□□□□□ -1.02
Trim47Q8C0E3 Gm4910-201ENSMUST00000119605 366 ntBASIC8.66□□□□□ -1.02
Trim47Q8C0E3 Gm13680-201ENSMUST00000119790 793 ntBASIC8.66□□□□□ -1.02
Trim47Q8C0E3 Rpl27-ps2-201ENSMUST00000120378 399 ntBASIC8.66□□□□□ -1.02
Trim47Q8C0E3 Dmrtc1a-203ENSMUST00000120808 1061 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Trim47Q8C0E3 Gm15586-201ENSMUST00000121218 528 ntBASIC8.66□□□□□ -1.02
Trim47Q8C0E3 Gm12368-201ENSMUST00000122251 434 ntBASIC8.66□□□□□ -1.02
Trim47Q8C0E3 1700019G24Rik-201ENSMUST00000130004 503 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Trim47Q8C0E3 Gm13964-201ENSMUST00000133815 734 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Trim47Q8C0E3 Gm13538-201ENSMUST00000143166 548 ntTSL 3 BASIC8.66□□□□□ -1.02
Trim47Q8C0E3 Gm13708-201ENSMUST00000145170 390 ntTSL 5 BASIC8.66□□□□□ -1.02
Retrieved 100 of 76,532 protein–RNA pairs in 75.4 ms