Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Gm36527-201ENSMUST00000195500 3029 ntBASIC7.19□□□□□ -1.26
Scaf4Q6PFF0 Gm9268-201ENSMUST00000166914 2586 ntAPPRIS ALT2 TSL 5 BASIC7.19□□□□□ -1.26
Scaf4Q6PFF0 Vmn2r62-201ENSMUST00000169130 2580 ntAPPRIS P1 TSL 5 BASIC7.19□□□□□ -1.26
Scaf4Q6PFF0 Gm9268-202ENSMUST00000173815 2565 ntAPPRIS P2 TSL 5 BASIC7.19□□□□□ -1.26
Scaf4Q6PFF0 Vwa5a-202ENSMUST00000118144 3502 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Scaf4Q6PFF0 Gm16506-201ENSMUST00000165553 1405 ntAPPRIS P1 TSL 5 BASIC7.19□□□□□ -1.26
Scaf4Q6PFF0 Olfr1254-203ENSMUST00000216587 2183 ntAPPRIS P1 TSL 5 BASIC7.19□□□□□ -1.26
Scaf4Q6PFF0 Gmeb1-203ENSMUST00000105965 4632 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Scaf4Q6PFF0 Olfr1555-ps1-202ENSMUST00000219261 2918 ntAPPRIS P1 TSL 5 BASIC7.19□□□□□ -1.26
Scaf4Q6PFF0 Rxfp1-201ENSMUST00000078527 5382 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Scaf4Q6PFF0 Olfr1440-202ENSMUST00000213657 7588 ntAPPRIS P1 TSL 5 BASIC7.19□□□□□ -1.26
Scaf4Q6PFF0 4930512H18Rik-201ENSMUST00000133752 1493 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Scaf4Q6PFF0 Trim5-201ENSMUST00000051795 1467 ntAPPRIS ALT2 TSL 5 BASIC7.19□□□□□ -1.26
Scaf4Q6PFF0 Olfr1351-202ENSMUST00000216030 2489 ntAPPRIS P1 TSL 3 BASIC7.19□□□□□ -1.26
Scaf4Q6PFF0 AC210924.1-201ENSMUST00000221183 2705 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Scaf4Q6PFF0 AC153132.1-201ENSMUST00000222625 2705 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Scaf4Q6PFF0 Dnase1l3-201ENSMUST00000026315 4747 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Scaf4Q6PFF0 Mrps25-203ENSMUST00000140438 6073 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Scaf4Q6PFF0 Zfp938-201ENSMUST00000041264 2035 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Scaf4Q6PFF0 Gm8279-202ENSMUST00000165713 1760 ntAPPRIS P5 TSL 5 BASIC7.19□□□□□ -1.26
Scaf4Q6PFF0 Gm5795-203ENSMUST00000171150 1758 ntAPPRIS ALT2 TSL 5 BASIC7.19□□□□□ -1.26
Scaf4Q6PFF0 Gm21897-201ENSMUST00000178312 1500 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
Scaf4Q6PFF0 Mir704-201ENSMUST00000102106 77 ntBASIC7.19□□□□□ -1.26
Scaf4Q6PFF0 Borcs8-202ENSMUST00000110139 679 ntAPPRIS ALT2 TSL 3 BASIC7.19□□□□□ -1.26
Scaf4Q6PFF0 Trappc2-201ENSMUST00000112192 1294 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Scaf4Q6PFF0 Clec4n-202ENSMUST00000112554 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC7.19□□□□□ -1.26
Scaf4Q6PFF0 Gm12577-201ENSMUST00000119701 574 ntBASIC7.19□□□□□ -1.26
Scaf4Q6PFF0 Gm7599-201ENSMUST00000121453 796 ntBASIC7.19□□□□□ -1.26
Scaf4Q6PFF0 Gm15122-201ENSMUST00000135434 462 ntTSL 2 BASIC7.19□□□□□ -1.26
Scaf4Q6PFF0 Gm15606-202ENSMUST00000139851 711 ntTSL 3 BASIC7.19□□□□□ -1.26
Scaf4Q6PFF0 Platr16-202ENSMUST00000150529 545 ntTSL 3 BASIC7.19□□□□□ -1.26
Scaf4Q6PFF0 Gm23740-201ENSMUST00000157385 100 ntBASIC7.19□□□□□ -1.26
Scaf4Q6PFF0 Gm16027-201ENSMUST00000161618 758 ntBASIC7.19□□□□□ -1.26
Scaf4Q6PFF0 Traj54-201ENSMUST00000165071 54 ntBASIC7.19□□□□□ -1.26
Scaf4Q6PFF0 Gm9027-201ENSMUST00000165914 661 ntBASIC7.19□□□□□ -1.26
Scaf4Q6PFF0 Gm4781-201ENSMUST00000167995 781 ntBASIC7.19□□□□□ -1.26
Scaf4Q6PFF0 Olfr102-201ENSMUST00000169373 1027 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
Scaf4Q6PFF0 Esp23-201ENSMUST00000178532 646 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Scaf4Q6PFF0 Gm26820-201ENSMUST00000180764 1008 ntTSL 5 BASIC7.19□□□□□ -1.26
Scaf4Q6PFF0 Gm2539-203ENSMUST00000181352 746 ntBASIC7.19□□□□□ -1.26
Scaf4Q6PFF0 Gm29126-201ENSMUST00000188686 151 ntBASIC7.19□□□□□ -1.26
Scaf4Q6PFF0 Gm28384-201ENSMUST00000189079 463 ntBASIC7.19□□□□□ -1.26
Scaf4Q6PFF0 Igkv13-62-1-201ENSMUST00000198690 317 ntBASIC7.19□□□□□ -1.26
Scaf4Q6PFF0 Gm40319-201ENSMUST00000199785 481 ntBASIC7.19□□□□□ -1.26
Scaf4Q6PFF0 Gm44988-201ENSMUST00000203835 1161 ntBASIC7.19□□□□□ -1.26
Scaf4Q6PFF0 Clec4n-206ENSMUST00000205129 363 ntTSL 5 BASIC7.19□□□□□ -1.26
Scaf4Q6PFF0 Gm34597-201ENSMUST00000211189 633 ntTSL 5 BASIC7.19□□□□□ -1.26
Scaf4Q6PFF0 Cd24a-202ENSMUST00000214476 743 ntAPPRIS ALT2 TSL 3 BASIC7.19□□□□□ -1.26
Scaf4Q6PFF0 Olfr1065-203ENSMUST00000216165 992 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
Scaf4Q6PFF0 AC154382.1-201ENSMUST00000220958 1282 ntBASIC7.19□□□□□ -1.26
Scaf4Q6PFF0 AC125190.2-201ENSMUST00000221160 497 ntBASIC7.19□□□□□ -1.26
Scaf4Q6PFF0 AC163621.3-201ENSMUST00000221738 1033 ntTSL 5 BASIC7.19□□□□□ -1.26
Scaf4Q6PFF0 1700066J03Rik-202ENSMUST00000224280 516 ntBASIC7.19□□□□□ -1.26
Scaf4Q6PFF0 AC154506.2-201ENSMUST00000225481 1276 ntBASIC7.19□□□□□ -1.26
Scaf4Q6PFF0 AC134864.1-201ENSMUST00000226326 511 ntBASIC7.19□□□□□ -1.26
Scaf4Q6PFF0 Yipf7-201ENSMUST00000031045 1219 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Scaf4Q6PFF0 Olfr698-201ENSMUST00000074981 936 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
Scaf4Q6PFF0 Pth-201ENSMUST00000079793 710 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Scaf4Q6PFF0 Map7d2-201ENSMUST00000043151 3087 ntAPPRIS ALT2 TSL 1 (best) BASIC7.19□□□□□ -1.26
Scaf4Q6PFF0 Sp1-201ENSMUST00000001326 7754 ntAPPRIS P2 TSL 1 (best) BASIC7.19□□□□□ -1.26
Scaf4Q6PFF0 Pabpc4l-201ENSMUST00000166505 5218 ntAPPRIS P1 TSL 2 BASIC7.19□□□□□ -1.26
Scaf4Q6PFF0 Cpxcr1-201ENSMUST00000101269 1596 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Scaf4Q6PFF0 Gm42885-201ENSMUST00000200763 4214 ntBASIC7.19□□□□□ -1.26
Scaf4Q6PFF0 1700093K21Rik-204ENSMUST00000169264 1320 ntAPPRIS P1 TSL 5 BASIC7.19□□□□□ -1.26
Scaf4Q6PFF0 Cntn1-202ENSMUST00000068378 3964 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Scaf4Q6PFF0 Gm13040-202ENSMUST00000169056 2104 ntAPPRIS P2 TSL 5 BASIC7.19□□□□□ -1.26
Scaf4Q6PFF0 Gm35439-201ENSMUST00000200051 4809 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Scaf4Q6PFF0 Wdr64-203ENSMUST00000194087 3225 ntAPPRIS ALT2 TSL 5 BASIC7.19□□□□□ -1.26
Scaf4Q6PFF0 Gpalpp1-201ENSMUST00000022585 5389 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Scaf4Q6PFF0 Prkacb-203ENSMUST00000106137 4061 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Scaf4Q6PFF0 AC163660.4-201ENSMUST00000224983 2171 ntBASIC7.19□□□□□ -1.26
Scaf4Q6PFF0 Pigc-202ENSMUST00000111594 3290 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Scaf4Q6PFF0 E330035G20Rik-202ENSMUST00000223323 3578 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Scaf4Q6PFF0 AC159476.1-201ENSMUST00000215914 1668 ntBASIC7.19□□□□□ -1.26
Scaf4Q6PFF0 4930432O09Rik-201ENSMUST00000219710 1986 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Scaf4Q6PFF0 Gm7978-201ENSMUST00000178552 1446 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Scaf4Q6PFF0 Gm16429-201ENSMUST00000179824 1446 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Scaf4Q6PFF0 Dnajc18-201ENSMUST00000025208 5169 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Scaf4Q6PFF0 Gm20706-201ENSMUST00000175985 2023 ntBASIC7.18□□□□□ -1.26
Scaf4Q6PFF0 Ppp4r4-202ENSMUST00000187155 2675 ntAPPRIS ALT2 TSL 5 BASIC7.18□□□□□ -1.26
Scaf4Q6PFF0 Gm42772-201ENSMUST00000199945 3041 ntBASIC7.18□□□□□ -1.26
Scaf4Q6PFF0 Actl11-201ENSMUST00000085073 3993 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
Scaf4Q6PFF0 Afm-202ENSMUST00000128740 2465 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Scaf4Q6PFF0 Smim9-201ENSMUST00000101433 706 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Scaf4Q6PFF0 Gm10477-201ENSMUST00000101552 165 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
Scaf4Q6PFF0 Igkv4-51-201ENSMUST00000103345 394 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
Scaf4Q6PFF0 Igkv6-29-201ENSMUST00000103379 344 ntAPPRIS ALT2 BASIC7.18□□□□□ -1.26
Scaf4Q6PFF0 Gm23358-201ENSMUST00000103887 110 ntBASIC7.18□□□□□ -1.26
Scaf4Q6PFF0 Gm14864-201ENSMUST00000116164 1087 ntBASIC7.18□□□□□ -1.26
Scaf4Q6PFF0 Gm13137-201ENSMUST00000118035 345 ntBASIC7.18□□□□□ -1.26
Scaf4Q6PFF0 Gm15048-201ENSMUST00000118201 954 ntBASIC7.18□□□□□ -1.26
Scaf4Q6PFF0 Gm11933-201ENSMUST00000121550 375 ntBASIC7.18□□□□□ -1.26
Scaf4Q6PFF0 n-R5s47-201ENSMUST00000122516 119 ntBASIC7.18□□□□□ -1.26
Scaf4Q6PFF0 Gm2800-201ENSMUST00000122988 641 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Scaf4Q6PFF0 Gm15345-201ENSMUST00000128240 663 ntTSL 3 BASIC7.18□□□□□ -1.26
Scaf4Q6PFF0 Gm13421-202ENSMUST00000142511 803 ntTSL 3 BASIC7.18□□□□□ -1.26
Scaf4Q6PFF0 Gm14487-201ENSMUST00000145413 1259 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Scaf4Q6PFF0 Gm13727-201ENSMUST00000154480 424 ntTSL 3 BASIC7.18□□□□□ -1.26
Scaf4Q6PFF0 Gm23094-201ENSMUST00000157551 322 ntBASIC7.18□□□□□ -1.26
Scaf4Q6PFF0 Gm25164-201ENSMUST00000158908 116 ntBASIC7.18□□□□□ -1.26
Retrieved 100 of 76,532 protein–RNA pairs in 378.1 ms