Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Gstm6-203ENSMUST00000106683 745 ntTSL 3 BASIC8.18□□□□□ -1.1
Vps54Q5SPW0 Snord88a-201ENSMUST00000116723 90 ntBASIC8.18□□□□□ -1.1
Vps54Q5SPW0 Gm14531-201ENSMUST00000120845 285 ntBASIC8.18□□□□□ -1.1
Vps54Q5SPW0 Gm14847-201ENSMUST00000121978 519 ntBASIC8.18□□□□□ -1.1
Vps54Q5SPW0 Gm22342-201ENSMUST00000122647 298 ntBASIC8.18□□□□□ -1.1
Vps54Q5SPW0 Gm23756-201ENSMUST00000157582 114 ntBASIC8.18□□□□□ -1.1
Vps54Q5SPW0 Gm19840-201ENSMUST00000169624 882 ntBASIC8.18□□□□□ -1.1
Vps54Q5SPW0 Gm26671-201ENSMUST00000180423 1157 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Vps54Q5SPW0 6530403H02Rik-203ENSMUST00000183168 843 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Vps54Q5SPW0 Gm27186-201ENSMUST00000184223 307 ntBASIC8.18□□□□□ -1.1
Vps54Q5SPW0 Gm28846-201ENSMUST00000189161 368 ntBASIC8.18□□□□□ -1.1
Vps54Q5SPW0 Gm38232-201ENSMUST00000193602 411 ntTSL 5 BASIC8.18□□□□□ -1.1
Vps54Q5SPW0 Gm43689-201ENSMUST00000195951 427 ntBASIC8.18□□□□□ -1.1
Vps54Q5SPW0 Trav15n-2-201ENSMUST00000199112 398 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
Vps54Q5SPW0 Trav15d-2-dv6d-2-201ENSMUST00000199800 398 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
Vps54Q5SPW0 Gm44896-201ENSMUST00000206190 772 ntBASIC8.18□□□□□ -1.1
Vps54Q5SPW0 Gm45899-201ENSMUST00000212196 1276 ntBASIC8.18□□□□□ -1.1
Vps54Q5SPW0 Gm20234-201ENSMUST00000214134 717 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Vps54Q5SPW0 AC154558.1-201ENSMUST00000222278 415 ntBASIC8.18□□□□□ -1.1
Vps54Q5SPW0 Gm33489-201ENSMUST00000223171 673 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Vps54Q5SPW0 AC154640.1-202ENSMUST00000227828 496 ntBASIC8.18□□□□□ -1.1
Vps54Q5SPW0 Ccr1l1-201ENSMUST00000071404 1166 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
Vps54Q5SPW0 Olfr1386-201ENSMUST00000071905 1128 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
Vps54Q5SPW0 Vmn1r181-208ENSMUST00000228842 4491 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
Vps54Q5SPW0 2810021J22Rik-201ENSMUST00000073924 3866 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Vps54Q5SPW0 Prdm11-202ENSMUST00000111274 11678 ntTSL 5 BASIC8.18□□□□□ -1.1
Vps54Q5SPW0 Exoc1-201ENSMUST00000049469 3272 ntAPPRIS ALT1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Vps54Q5SPW0 Gm21036-201ENSMUST00000207544 2611 ntBASIC8.18□□□□□ -1.1
Vps54Q5SPW0 Shprh-203ENSMUST00000159541 6679 ntAPPRIS ALT2 TSL 1 (best) BASIC8.18□□□□□ -1.1
Vps54Q5SPW0 Nlrp3-202ENSMUST00000101148 4021 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Vps54Q5SPW0 Gm31562-201ENSMUST00000213973 2747 ntTSL 5 BASIC8.18□□□□□ -1.1
Vps54Q5SPW0 Kpna2-201ENSMUST00000018506 2054 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Vps54Q5SPW0 Itih4-201ENSMUST00000006703 2980 ntAPPRIS ALT2 TSL 1 (best) BASIC8.18□□□□□ -1.1
Vps54Q5SPW0 Itih4-202ENSMUST00000078490 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC8.18□□□□□ -1.1
Vps54Q5SPW0 Synj2-204ENSMUST00000115785 3778 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Vps54Q5SPW0 Gm43411-201ENSMUST00000196235 1579 ntBASIC8.18□□□□□ -1.1
Vps54Q5SPW0 Vcam1-203ENSMUST00000196449 2532 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Vps54Q5SPW0 Olfr1426-202ENSMUST00000208703 2546 ntAPPRIS P1 TSL 2 BASIC8.18□□□□□ -1.1
Vps54Q5SPW0 Itch-201ENSMUST00000029126 5159 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Vps54Q5SPW0 Pot1b-201ENSMUST00000086876 3499 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
Vps54Q5SPW0 Unc13b-215ENSMUST00000207569 14754 ntTSL 5 BASIC8.17□□□□□ -1.1
Vps54Q5SPW0 Dpcr1-201ENSMUST00000095467 2611 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Vps54Q5SPW0 Chrnb3-201ENSMUST00000060943 4589 ntAPPRIS P4 TSL 1 (best) BASIC8.17□□□□□ -1.1
Vps54Q5SPW0 4632404H12Rik-202ENSMUST00000195940 4671 ntBASIC8.17□□□□□ -1.1
Vps54Q5SPW0 CT025535.2-201ENSMUST00000228572 7441 ntBASIC8.17□□□□□ -1.1
Vps54Q5SPW0 Gja10-201ENSMUST00000056517 2117 ntAPPRIS P2 BASIC8.17□□□□□ -1.1
Vps54Q5SPW0 Gm29025-201ENSMUST00000186756 2163 ntTSL 5 BASIC8.17□□□□□ -1.1
Vps54Q5SPW0 Xiap-204ENSMUST00000115095 6670 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Vps54Q5SPW0 Gm4876-203ENSMUST00000139701 2225 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Vps54Q5SPW0 CT030185.1-201ENSMUST00000222940 2289 ntBASIC8.17□□□□□ -1.1
Vps54Q5SPW0 Olfr1426-207ENSMUST00000220005 2466 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
Vps54Q5SPW0 Igkv3-5-201ENSMUST00000103400 382 ntAPPRIS P1 BASIC8.17□□□□□ -1.1
Vps54Q5SPW0 Olfr26-201ENSMUST00000104874 931 ntAPPRIS P1 BASIC8.17□□□□□ -1.1
Vps54Q5SPW0 Gm12573-201ENSMUST00000118158 286 ntBASIC8.17□□□□□ -1.1
Vps54Q5SPW0 Gm12242-201ENSMUST00000118824 738 ntBASIC8.17□□□□□ -1.1
Vps54Q5SPW0 Apc-ps1-201ENSMUST00000119356 470 ntBASIC8.17□□□□□ -1.1
Vps54Q5SPW0 Gm14741-201ENSMUST00000120777 1009 ntBASIC8.17□□□□□ -1.1
Vps54Q5SPW0 Gm14489-201ENSMUST00000120868 901 ntBASIC8.17□□□□□ -1.1
Vps54Q5SPW0 Gm12175-201ENSMUST00000122081 345 ntBASIC8.17□□□□□ -1.1
Vps54Q5SPW0 Gm14613-201ENSMUST00000122239 752 ntBASIC8.17□□□□□ -1.1
Vps54Q5SPW0 Gm13485-201ENSMUST00000146690 659 ntTSL 2 BASIC8.17□□□□□ -1.1
Vps54Q5SPW0 Gm22552-201ENSMUST00000157796 337 ntBASIC8.17□□□□□ -1.1
Vps54Q5SPW0 Fabp12-204ENSMUST00000172126 779 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Vps54Q5SPW0 Gm27507-201ENSMUST00000184199 93 ntBASIC8.17□□□□□ -1.1
Vps54Q5SPW0 Gm38068-201ENSMUST00000192546 540 ntBASIC8.17□□□□□ -1.1
Vps54Q5SPW0 4930590H14Rik-201ENSMUST00000193999 551 ntBASIC8.17□□□□□ -1.1
Vps54Q5SPW0 Gm37068-201ENSMUST00000195168 640 ntTSL 3 BASIC8.17□□□□□ -1.1
Vps54Q5SPW0 Gm37637-201ENSMUST00000195540 1256 ntBASIC8.17□□□□□ -1.1
Vps54Q5SPW0 4930568G15Rik-202ENSMUST00000195635 996 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Vps54Q5SPW0 Gm43849-201ENSMUST00000201086 215 ntBASIC8.17□□□□□ -1.1
Vps54Q5SPW0 Gm43867-201ENSMUST00000203860 525 ntBASIC8.17□□□□□ -1.1
Vps54Q5SPW0 Gm17950-201ENSMUST00000214617 646 ntBASIC8.17□□□□□ -1.1
Vps54Q5SPW0 Gm18914-201ENSMUST00000214625 616 ntBASIC8.17□□□□□ -1.1
Vps54Q5SPW0 Gm5080-201ENSMUST00000220341 743 ntBASIC8.17□□□□□ -1.1
Vps54Q5SPW0 Gm2139-201ENSMUST00000222569 1075 ntBASIC8.17□□□□□ -1.1
Vps54Q5SPW0 Dpm2-201ENSMUST00000028151 869 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Vps54Q5SPW0 Olfr1510-201ENSMUST00000079459 1014 ntAPPRIS P1 BASIC8.17□□□□□ -1.1
Vps54Q5SPW0 Zfp626-201ENSMUST00000080175 816 ntTSL 5 BASIC8.17□□□□□ -1.1
Vps54Q5SPW0 Gm25587-201ENSMUST00000082498 166 ntBASIC8.17□□□□□ -1.1
Vps54Q5SPW0 n-R5s217-201ENSMUST00000083341 116 ntBASIC8.17□□□□□ -1.1
Vps54Q5SPW0 AC153955.2-201ENSMUST00000216739 4129 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Vps54Q5SPW0 Zfp638-203ENSMUST00000113836 4366 ntAPPRIS ALT2 TSL 5 BASIC8.17□□□□□ -1.1
Vps54Q5SPW0 Vmn1r51-213ENSMUST00000228880 4353 ntAPPRIS P1 BASIC8.17□□□□□ -1.1
Vps54Q5SPW0 Gm29398-201ENSMUST00000186355 1491 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Vps54Q5SPW0 Gm16123-201ENSMUST00000118647 1517 ntBASIC8.17□□□□□ -1.1
Vps54Q5SPW0 Chil3-201ENSMUST00000063062 1539 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Vps54Q5SPW0 Crtam-202ENSMUST00000180384 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC8.17□□□□□ -1.1
Vps54Q5SPW0 Gm44022-201ENSMUST00000203708 5429 ntBASIC8.17□□□□□ -1.1
Vps54Q5SPW0 Gm26967-201ENSMUST00000182878 2303 ntBASIC8.17□□□□□ -1.1
Vps54Q5SPW0 Mphosph9-201ENSMUST00000031344 7747 ntAPPRIS P3 TSL 5 BASIC8.16□□□□□ -1.1
Vps54Q5SPW0 Gm10735-201ENSMUST00000099162 2943 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
Vps54Q5SPW0 Zfp712-201ENSMUST00000167565 3968 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Vps54Q5SPW0 Psd4-210ENSMUST00000166388 4181 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Vps54Q5SPW0 Ighv1-19-201ENSMUST00000103505 348 ntAPPRIS ALT2 BASIC8.16□□□□□ -1.1
Vps54Q5SPW0 Gm25760-201ENSMUST00000103989 132 ntBASIC8.16□□□□□ -1.1
Vps54Q5SPW0 Gm24473-201ENSMUST00000104483 131 ntBASIC8.16□□□□□ -1.1
Vps54Q5SPW0 Ccdc47-202ENSMUST00000106865 704 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Vps54Q5SPW0 Mbd5-202ENSMUST00000112745 6037 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Vps54Q5SPW0 Mgst1-204ENSMUST00000120302 559 ntAPPRIS P1 TSL 3 BASIC8.16□□□□□ -1.1
Vps54Q5SPW0 Gm11882-201ENSMUST00000121463 506 ntBASIC8.16□□□□□ -1.1
Retrieved 100 of 76,532 protein–RNA pairs in 51.6 ms