Protein–RNA interactions for Protein: Q03358

Msx2, Homeobox protein MSX-2, mousemouse

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx2Q03358 Gm42615-201ENSMUST00000197704 1820 ntBASIC7.15□□□□□ -1.27
Msx2Q03358 Gm20597-201ENSMUST00000218774 5486 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
Msx2Q03358 AC140280.1-201ENSMUST00000227826 1847 ntBASIC7.15□□□□□ -1.27
Msx2Q03358 5530400K19Rik-201ENSMUST00000193511 1916 ntBASIC7.15□□□□□ -1.27
Msx2Q03358 Gm44228-201ENSMUST00000204888 2026 ntBASIC7.15□□□□□ -1.27
Msx2Q03358 Gja6-201ENSMUST00000069417 2017 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
Msx2Q03358 Gtf2h1-202ENSMUST00000107644 2187 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
Msx2Q03358 Kbtbd3-202ENSMUST00000212221 2313 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
Msx2Q03358 Cdk5rap2-206ENSMUST00000144099 11847 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
Msx2Q03358 Ttc39d-202ENSMUST00000134652 2438 ntAPPRIS P1 TSL 3 BASIC7.15□□□□□ -1.27
Msx2Q03358 Arid5b-203ENSMUST00000218532 3025 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
Msx2Q03358 Serpinb9-201ENSMUST00000006391 3397 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Msx2Q03358 Gm43285-201ENSMUST00000196563 3592 ntBASIC7.14□□□□□ -1.27
Msx2Q03358 Rsad2-201ENSMUST00000020970 3782 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Msx2Q03358 Baz2b-201ENSMUST00000090925 7576 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
Msx2Q03358 Ccdc127-201ENSMUST00000022063 9559 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Msx2Q03358 Gm16221-201ENSMUST00000117331 393 ntBASIC7.14□□□□□ -1.27
Msx2Q03358 Gm13806-201ENSMUST00000117822 325 ntBASIC7.14□□□□□ -1.27
Msx2Q03358 Gm4918-201ENSMUST00000119420 1084 ntBASIC7.14□□□□□ -1.27
Msx2Q03358 Gm14945-201ENSMUST00000119556 1118 ntBASIC7.14□□□□□ -1.27
Msx2Q03358 Gm9516-201ENSMUST00000119684 424 ntBASIC7.14□□□□□ -1.27
Msx2Q03358 Gm13532-201ENSMUST00000120373 240 ntBASIC7.14□□□□□ -1.27
Msx2Q03358 Gm11891-201ENSMUST00000121241 619 ntBASIC7.14□□□□□ -1.27
Msx2Q03358 Olfr397-201ENSMUST00000121280 1091 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
Msx2Q03358 Gm15488-201ENSMUST00000121682 670 ntBASIC7.14□□□□□ -1.27
Msx2Q03358 Prkag2os2-201ENSMUST00000123610 1432 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Msx2Q03358 Cdh7-203ENSMUST00000129923 1409 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Msx2Q03358 9530026F06Rik-201ENSMUST00000141000 892 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Msx2Q03358 Olfr75-ps1-202ENSMUST00000141956 2500 ntTSL 2 BASIC7.14□□□□□ -1.27
Msx2Q03358 9530034E10Rik-201ENSMUST00000146982 502 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Msx2Q03358 Gm7281-201ENSMUST00000160010 543 ntBASIC7.14□□□□□ -1.27
Msx2Q03358 Gm16226-203ENSMUST00000161197 395 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Msx2Q03358 Cyp2j7-201ENSMUST00000162514 1515 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
Msx2Q03358 Gm16556-201ENSMUST00000162608 471 ntTSL 5 BASIC7.14□□□□□ -1.27
Msx2Q03358 Gm6729-201ENSMUST00000165173 1452 ntBASIC7.14□□□□□ -1.27
Msx2Q03358 Klrc3-202ENSMUST00000170148 712 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
Msx2Q03358 Scgb1b27-202ENSMUST00000173387 762 ntAPPRIS ALT2 TSL 2 BASIC7.14□□□□□ -1.27
Msx2Q03358 Vmn1r-ps27-201ENSMUST00000174619 985 ntBASIC7.14□□□□□ -1.27
Msx2Q03358 Gm25037-201ENSMUST00000175418 110 ntBASIC7.14□□□□□ -1.27
Msx2Q03358 Gm10717-207ENSMUST00000179264 672 ntTSL 5 BASIC7.14□□□□□ -1.27
Msx2Q03358 4930445N18Rik-201ENSMUST00000180631 886 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Msx2Q03358 Gm27288-201ENSMUST00000184215 80 ntBASIC7.14□□□□□ -1.27
Msx2Q03358 Gm27597-201ENSMUST00000184365 80 ntBASIC7.14□□□□□ -1.27
Msx2Q03358 Gm27506-201ENSMUST00000184558 80 ntBASIC7.14□□□□□ -1.27
Msx2Q03358 Gm27529-201ENSMUST00000184975 80 ntBASIC7.14□□□□□ -1.27
Msx2Q03358 Gm27907-201ENSMUST00000185101 80 ntBASIC7.14□□□□□ -1.27
Msx2Q03358 Gm29379-201ENSMUST00000186305 2166 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Msx2Q03358 Gm28276-201ENSMUST00000188508 2166 ntTSL 5 BASIC7.14□□□□□ -1.27
Msx2Q03358 Gm28201-201ENSMUST00000189989 2166 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Msx2Q03358 Gm29562-201ENSMUST00000190113 904 ntBASIC7.14□□□□□ -1.27
Msx2Q03358 1700016D06Rik-202ENSMUST00000190741 604 ntTSL 2 BASIC7.14□□□□□ -1.27
Msx2Q03358 Ighv5-21-201ENSMUST00000191935 295 ntBASIC7.14□□□□□ -1.27
Msx2Q03358 Gm18843-201ENSMUST00000194982 719 ntBASIC7.14□□□□□ -1.27
Msx2Q03358 Gm37481-201ENSMUST00000195176 403 ntBASIC7.14□□□□□ -1.27
Msx2Q03358 Gm19596-201ENSMUST00000203685 739 ntBASIC7.14□□□□□ -1.27
Msx2Q03358 A530053G22Rik-205ENSMUST00000205153 1448 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Msx2Q03358 Gm21036-201ENSMUST00000207544 2611 ntBASIC7.14□□□□□ -1.27
Msx2Q03358 Olfr1294-201ENSMUST00000208334 942 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
Msx2Q03358 Gm3198-201ENSMUST00000208725 1026 ntBASIC7.14□□□□□ -1.27
Msx2Q03358 Gm18469-201ENSMUST00000208850 439 ntBASIC7.14□□□□□ -1.27
Msx2Q03358 5430402P08Rik-201ENSMUST00000211799 1143 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Msx2Q03358 AC154307.1-201ENSMUST00000214799 90 ntBASIC7.14□□□□□ -1.27
Msx2Q03358 Gm46124-201ENSMUST00000215223 808 ntTSL 5 BASIC7.14□□□□□ -1.27
Msx2Q03358 AC124414.1-201ENSMUST00000218033 2946 ntBASIC7.14□□□□□ -1.27
Msx2Q03358 Gm46317-201ENSMUST00000221103 393 ntBASIC7.14□□□□□ -1.27
Msx2Q03358 AC163651.1-201ENSMUST00000222500 372 ntBASIC7.14□□□□□ -1.27
Msx2Q03358 AC158523.2-201ENSMUST00000222708 548 ntBASIC7.14□□□□□ -1.27
Msx2Q03358 AC154184.2-201ENSMUST00000225335 349 ntBASIC7.14□□□□□ -1.27
Msx2Q03358 AC099629.1-201ENSMUST00000226778 464 ntBASIC7.14□□□□□ -1.27
Msx2Q03358 AC139845.2-201ENSMUST00000227504 436 ntBASIC7.14□□□□□ -1.27
Msx2Q03358 AC154738.3-201ENSMUST00000227953 409 ntBASIC7.14□□□□□ -1.27
Msx2Q03358 AC166822.2-201ENSMUST00000228746 275 ntBASIC7.14□□□□□ -1.27
Msx2Q03358 Ssmem1-201ENSMUST00000031797 1340 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Msx2Q03358 Asb12-201ENSMUST00000033549 1258 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Msx2Q03358 Psg17-201ENSMUST00000004655 2100 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Msx2Q03358 5530400C23Rik-201ENSMUST00000048459 649 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Msx2Q03358 Krtap7-1-201ENSMUST00000056118 620 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
Msx2Q03358 Apol10a-201ENSMUST00000060551 3033 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Msx2Q03358 Nasp-203ENSMUST00000081182 1461 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Msx2Q03358 Gm10717-203ENSMUST00000099051 639 ntAPPRIS ALT2 TSL 5 BASIC7.14□□□□□ -1.27
Msx2Q03358 Nrk-202ENSMUST00000113052 8043 ntAPPRIS ALT2 TSL 5 BASIC7.14□□□□□ -1.27
Msx2Q03358 Nbas-201ENSMUST00000042953 7234 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
Msx2Q03358 Wdr37-202ENSMUST00000054251 4626 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
Msx2Q03358 Nlrp1c-ps-202ENSMUST00000174668 3422 ntBASIC7.14□□□□□ -1.27
Msx2Q03358 Gm42820-201ENSMUST00000200084 3063 ntBASIC7.14□□□□□ -1.27
Msx2Q03358 Masp1-201ENSMUST00000089883 2752 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Msx2Q03358 Gm37877-201ENSMUST00000191630 2709 ntBASIC7.14□□□□□ -1.27
Msx2Q03358 Birc6-223ENSMUST00000183224 14562 ntAPPRIS ALT2 TSL 5 BASIC7.13□□□□□ -1.27
Msx2Q03358 Exoc2-201ENSMUST00000021785 4256 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Msx2Q03358 Trmt10b-201ENSMUST00000044673 2064 ntAPPRIS P2 TSL 1 (best) BASIC7.13□□□□□ -1.27
Msx2Q03358 C87499-201ENSMUST00000053304 1901 ntAPPRIS P2 TSL 1 (best) BASIC7.13□□□□□ -1.27
Msx2Q03358 Bank1-201ENSMUST00000041577 3268 ntAPPRIS P3 TSL 1 (best) BASIC7.13□□□□□ -1.27
Msx2Q03358 Vmn1r54-202ENSMUST00000226921 3234 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
Msx2Q03358 Hdac9-205ENSMUST00000209902 7940 ntAPPRIS ALT2 TSL 5 BASIC7.13□□□□□ -1.27
Msx2Q03358 AC156025.2-201ENSMUST00000225907 1533 ntBASIC7.13□□□□□ -1.27
Msx2Q03358 Nat8f4-201ENSMUST00000095757 3019 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Msx2Q03358 Klrc2-205ENSMUST00000145984 2811 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Msx2Q03358 Pde1c-202ENSMUST00000114327 6821 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Msx2Q03358 Gm38288-201ENSMUST00000195330 1320 ntBASIC7.13□□□□□ -1.27
Msx2Q03358 AC110091.3-201ENSMUST00000213406 1304 ntTSL 5 BASIC7.13□□□□□ -1.27
Retrieved 100 of 76,532 protein–RNA pairs in 74.4 ms