Protein–RNA interactions for Protein: P53798

Fdft1, Squalene synthase, mousemouse

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fdft1P53798 Gm38412-201ENSMUST00000199205 3895 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Fdft1P53798 Gm45290-201ENSMUST00000211177 3890 ntBASIC6.82□□□□□ -1.32
Fdft1P53798 Wdr66-207ENSMUST00000170536 3679 ntTSL 5 BASIC6.82□□□□□ -1.32
Fdft1P53798 Cldn12-202ENSMUST00000115445 3477 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Fdft1P53798 Gm18908-201ENSMUST00000207125 1483 ntBASIC6.82□□□□□ -1.32
Fdft1P53798 Ifna14-201ENSMUST00000102808 570 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
Fdft1P53798 Mir760-201ENSMUST00000103257 119 ntBASIC6.82□□□□□ -1.32
Fdft1P53798 Gm25546-201ENSMUST00000103977 132 ntBASIC6.82□□□□□ -1.32
Fdft1P53798 Gm15105-201ENSMUST00000117777 204 ntBASIC6.82□□□□□ -1.32
Fdft1P53798 Gm15217-202ENSMUST00000141358 347 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.32
Fdft1P53798 Stau2-209ENSMUST00000145092 564 ntTSL 5 BASIC6.82□□□□□ -1.32
Fdft1P53798 1700001G01Rik-204ENSMUST00000153022 928 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Fdft1P53798 Gm25180-201ENSMUST00000157746 115 ntBASIC6.82□□□□□ -1.32
Fdft1P53798 Gm7244-201ENSMUST00000164658 455 ntBASIC6.82□□□□□ -1.32
Fdft1P53798 Gm7651-201ENSMUST00000173398 901 ntBASIC6.82□□□□□ -1.32
Fdft1P53798 Gm4308-201ENSMUST00000179735 914 ntBASIC6.82□□□□□ -1.32
Fdft1P53798 Gm4301-201ENSMUST00000186197 914 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
Fdft1P53798 Gm4312-201ENSMUST00000190264 914 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
Fdft1P53798 Gm30517-201ENSMUST00000197350 772 ntBASIC6.82□□□□□ -1.32
Fdft1P53798 Gm18593-201ENSMUST00000200754 1139 ntBASIC6.82□□□□□ -1.32
Fdft1P53798 Mrln-201ENSMUST00000020090 443 ntAPPRIS P1 TSL 2 BASIC6.82□□□□□ -1.32
Fdft1P53798 Gm42673-201ENSMUST00000202676 337 ntBASIC6.82□□□□□ -1.32
Fdft1P53798 Gm21054-201ENSMUST00000203981 380 ntBASIC6.82□□□□□ -1.32
Fdft1P53798 Gm45100-201ENSMUST00000209153 391 ntBASIC6.82□□□□□ -1.32
Fdft1P53798 AC151971.2-201ENSMUST00000217540 909 ntBASIC6.82□□□□□ -1.32
Fdft1P53798 AL713985.1-201ENSMUST00000219030 420 ntBASIC6.82□□□□□ -1.32
Fdft1P53798 Olfr420-201ENSMUST00000068403 1046 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
Fdft1P53798 4921539E11Rik-201ENSMUST00000030245 2448 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Fdft1P53798 Osbpl9-214ENSMUST00000160774 2765 ntTSL 5 BASIC6.82□□□□□ -1.32
Fdft1P53798 Gm44661-201ENSMUST00000208830 3503 ntBASIC6.82□□□□□ -1.32
Fdft1P53798 AC155941.4-201ENSMUST00000219731 2705 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Fdft1P53798 Gm31805-201ENSMUST00000211921 4031 ntTSL 3 BASIC6.82□□□□□ -1.32
Fdft1P53798 Zfp708-202ENSMUST00000109743 2536 ntAPPRIS ALT2 TSL 2 BASIC6.82□□□□□ -1.32
Fdft1P53798 Foxp1-204ENSMUST00000113322 7177 ntTSL 5 BASIC6.81□□□□□ -1.32
Fdft1P53798 Ncl-201ENSMUST00000027438 8202 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Fdft1P53798 Ssbp1-202ENSMUST00000114779 4398 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Fdft1P53798 Cpne3-201ENSMUST00000029885 5648 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Fdft1P53798 C3ar1-201ENSMUST00000042081 4305 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Fdft1P53798 Acp2-201ENSMUST00000002172 4656 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Fdft1P53798 Olfr550-202ENSMUST00000216524 4957 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
Fdft1P53798 Rs1-201ENSMUST00000033650 5840 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Fdft1P53798 4930517E11Rik-201ENSMUST00000129584 1457 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Fdft1P53798 Cct8-203ENSMUST00000175977 1470 ntTSL 5 BASIC6.81□□□□□ -1.32
Fdft1P53798 Gla-201ENSMUST00000033621 3172 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Fdft1P53798 Cep112-202ENSMUST00000106715 1161 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Fdft1P53798 Olfr1396-202ENSMUST00000109201 1170 ntAPPRIS P1 TSL 3 BASIC6.81□□□□□ -1.32
Fdft1P53798 Tm6sf1-202ENSMUST00000119543 1066 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Fdft1P53798 Rpl15-ps1-201ENSMUST00000120694 564 ntBASIC6.81□□□□□ -1.32
Fdft1P53798 Gm12145-201ENSMUST00000142108 217 ntTSL 3 BASIC6.81□□□□□ -1.32
Fdft1P53798 Klra8-201ENSMUST00000014476 1178 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Fdft1P53798 Gm14097-201ENSMUST00000147868 470 ntTSL 3 BASIC6.81□□□□□ -1.32
Fdft1P53798 Gm26183-201ENSMUST00000157685 139 ntBASIC6.81□□□□□ -1.32
Fdft1P53798 Gm3326-201ENSMUST00000164656 1043 ntBASIC6.81□□□□□ -1.32
Fdft1P53798 Gm17212-201ENSMUST00000166666 259 ntBASIC6.81□□□□□ -1.32
Fdft1P53798 Obox3-204ENSMUST00000173912 1244 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
Fdft1P53798 Mir5100-201ENSMUST00000174993 64 ntBASIC6.81□□□□□ -1.32
Fdft1P53798 Gm28991-201ENSMUST00000186584 543 ntTSL 5 BASIC6.81□□□□□ -1.32
Fdft1P53798 Ms4a5-202ENSMUST00000186937 816 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Fdft1P53798 Gm29349-201ENSMUST00000188692 174 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Fdft1P53798 Gm19331-201ENSMUST00000193799 1092 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Fdft1P53798 Gm43122-201ENSMUST00000201752 354 ntTSL 3 BASIC6.81□□□□□ -1.32
Fdft1P53798 Gm44613-201ENSMUST00000205637 877 ntTSL 5 BASIC6.81□□□□□ -1.32
Fdft1P53798 Gm44613-202ENSMUST00000205962 691 ntTSL 3 BASIC6.81□□□□□ -1.32
Fdft1P53798 Gm45394-201ENSMUST00000209240 1175 ntBASIC6.81□□□□□ -1.32
Fdft1P53798 Olfr574-201ENSMUST00000052997 1041 ntAPPRIS P2 BASIC6.81□□□□□ -1.32
Fdft1P53798 Ms4a5-201ENSMUST00000067673 1005 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Fdft1P53798 Lats2-203ENSMUST00000077981 786 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Fdft1P53798 Xlr4a-201ENSMUST00000078775 1162 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Fdft1P53798 Noc3l-201ENSMUST00000025963 3977 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Fdft1P53798 Cyp2c29-202ENSMUST00000176624 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
Fdft1P53798 Gm10555-201ENSMUST00000193178 1791 ntBASIC6.81□□□□□ -1.32
Fdft1P53798 Fam205a4-201ENSMUST00000108026 4130 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
Fdft1P53798 Vmn2r-ps54-205ENSMUST00000182110 2587 ntBASIC6.81□□□□□ -1.32
Fdft1P53798 A330023F24Rik-202ENSMUST00000181273 4217 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Fdft1P53798 Adam30-201ENSMUST00000050342 3510 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
Fdft1P53798 A430110C17Rik-201ENSMUST00000195666 4348 ntBASIC6.81□□□□□ -1.32
Fdft1P53798 Gm20754-202ENSMUST00000192642 1357 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Fdft1P53798 Bdnf-201ENSMUST00000053317 4266 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Fdft1P53798 4921539H07Rik-201ENSMUST00000197200 2985 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Fdft1P53798 Dnajb4-202ENSMUST00000050073 2464 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Fdft1P53798 Gm18248-201ENSMUST00000191164 1846 ntBASIC6.8□□□□□ -1.32
Fdft1P53798 Tcf7l2-213ENSMUST00000111662 3715 ntAPPRIS ALT2 TSL 5 BASIC6.8□□□□□ -1.32
Fdft1P53798 Gm19024-201ENSMUST00000194681 1319 ntBASIC6.8□□□□□ -1.32
Fdft1P53798 Pde1c-206ENSMUST00000166890 4728 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Fdft1P53798 Gm43339-201ENSMUST00000200032 1606 ntBASIC6.8□□□□□ -1.32
Fdft1P53798 Synb-201ENSMUST00000059362 4055 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Fdft1P53798 Zfp280d-203ENSMUST00000183410 4200 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
Fdft1P53798 Tpx2-207ENSMUST00000178997 4161 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Fdft1P53798 Gm22774-201ENSMUST00000102084 109 ntBASIC6.8□□□□□ -1.32
Fdft1P53798 Gm12635-201ENSMUST00000117285 752 ntBASIC6.8□□□□□ -1.32
Fdft1P53798 Sumo2-207ENSMUST00000153892 1051 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Fdft1P53798 Gm23891-201ENSMUST00000158114 138 ntBASIC6.8□□□□□ -1.32
Fdft1P53798 Gm16573-201ENSMUST00000160334 801 ntTSL 3 BASIC6.8□□□□□ -1.32
Fdft1P53798 Krtap11-1-201ENSMUST00000171542 1008 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
Fdft1P53798 Gm22569-201ENSMUST00000175545 124 ntBASIC6.8□□□□□ -1.32
Fdft1P53798 Gm27596-201ENSMUST00000185061 83 ntBASIC6.8□□□□□ -1.32
Fdft1P53798 Gm28087-201ENSMUST00000189195 767 ntTSL 5 BASIC6.8□□□□□ -1.32
Fdft1P53798 U90926-202ENSMUST00000201332 524 ntAPPRIS P5 TSL 1 (best) BASIC6.8□□□□□ -1.32
Fdft1P53798 Gm5886-203ENSMUST00000203983 2613 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Fdft1P53798 Rpl19-ps9-201ENSMUST00000205423 588 ntBASIC6.8□□□□□ -1.32
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms