Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Gm16284-201ENSMUST00000140995 400 ntBASIC6.67□□□□□ -1.34
Sox3P53784 Gm13373-201ENSMUST00000144634 655 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Sox3P53784 Cnih1-202ENSMUST00000146629 789 ntTSL 5 BASIC6.67□□□□□ -1.34
Sox3P53784 Gm11840-201ENSMUST00000156947 696 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Sox3P53784 Gm23386-201ENSMUST00000158585 144 ntBASIC6.67□□□□□ -1.34
Sox3P53784 Slc25a5-ps-201ENSMUST00000162199 826 ntBASIC6.67□□□□□ -1.34
Sox3P53784 Mpped2-201ENSMUST00000016530 1217 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Sox3P53784 Gm17022-201ENSMUST00000166415 922 ntBASIC6.67□□□□□ -1.34
Sox3P53784 Rps12-ps13-201ENSMUST00000178365 399 ntBASIC6.67□□□□□ -1.34
Sox3P53784 Rps12-ps11-201ENSMUST00000178427 399 ntBASIC6.67□□□□□ -1.34
Sox3P53784 Rps12-ps12-201ENSMUST00000179020 399 ntBASIC6.67□□□□□ -1.34
Sox3P53784 Rps12-ps17-201ENSMUST00000179067 399 ntBASIC6.67□□□□□ -1.34
Sox3P53784 Tcrg-C4-201ENSMUST00000179181 985 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
Sox3P53784 Rps12-ps6-201ENSMUST00000179239 399 ntBASIC6.67□□□□□ -1.34
Sox3P53784 Rps12-ps14-201ENSMUST00000179356 399 ntBASIC6.67□□□□□ -1.34
Sox3P53784 Rps12-ps18-201ENSMUST00000179420 399 ntBASIC6.67□□□□□ -1.34
Sox3P53784 Rps12-ps15-201ENSMUST00000179567 399 ntBASIC6.67□□□□□ -1.34
Sox3P53784 n-R5s93-201ENSMUST00000180091 119 ntBASIC6.67□□□□□ -1.34
Sox3P53784 Gm4340-202ENSMUST00000181036 1197 ntAPPRIS ALT2 TSL 3 BASIC6.67□□□□□ -1.34
Sox3P53784 Rps12l1-201ENSMUST00000183090 399 ntBASIC6.67□□□□□ -1.34
Sox3P53784 Zfp572-202ENSMUST00000184208 1078 ntBASIC6.67□□□□□ -1.34
Sox3P53784 Mir7653-201ENSMUST00000184358 61 ntBASIC6.67□□□□□ -1.34
Sox3P53784 Gm8524-201ENSMUST00000186232 379 ntBASIC6.67□□□□□ -1.34
Sox3P53784 Platr10-201ENSMUST00000190602 1026 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Sox3P53784 Gm38122-201ENSMUST00000192679 885 ntBASIC6.67□□□□□ -1.34
Sox3P53784 Gm37439-201ENSMUST00000193150 856 ntBASIC6.67□□□□□ -1.34
Sox3P53784 4930533L02Rik-201ENSMUST00000194425 1160 ntBASIC6.67□□□□□ -1.34
Sox3P53784 Gm43762-201ENSMUST00000201521 295 ntBASIC6.67□□□□□ -1.34
Sox3P53784 Gm18690-201ENSMUST00000204488 985 ntBASIC6.67□□□□□ -1.34
Sox3P53784 Gm44538-201ENSMUST00000205615 348 ntBASIC6.67□□□□□ -1.34
Sox3P53784 Gm45185-201ENSMUST00000207556 404 ntBASIC6.67□□□□□ -1.34
Sox3P53784 Rps12-ps4-201ENSMUST00000208689 397 ntBASIC6.67□□□□□ -1.34
Sox3P53784 Gm23734-201ENSMUST00000083753 109 ntBASIC6.67□□□□□ -1.34
Sox3P53784 Pole-201ENSMUST00000007296 7163 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Sox3P53784 Scn3a-201ENSMUST00000066432 9560 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
Sox3P53784 4930554C24Rik-203ENSMUST00000216802 1346 ntTSL 5 BASIC6.67□□□□□ -1.34
Sox3P53784 Gm44130-201ENSMUST00000205157 3004 ntBASIC6.67□□□□□ -1.34
Sox3P53784 Gm11853-201ENSMUST00000119687 1384 ntBASIC6.67□□□□□ -1.34
Sox3P53784 Tgfbr1-203ENSMUST00000107725 1713 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Sox3P53784 Gm12021-201ENSMUST00000121061 1746 ntBASIC6.67□□□□□ -1.34
Sox3P53784 Trrap-203ENSMUST00000100467 12479 ntAPPRIS P2 TSL 1 (best) BASIC6.67□□□□□ -1.34
Sox3P53784 Trrap-202ENSMUST00000094120 12456 ntAPPRIS ALT2 TSL 5 BASIC6.67□□□□□ -1.34
Sox3P53784 Blm-201ENSMUST00000081314 4598 ntAPPRIS P3 TSL 1 (best) BASIC6.67□□□□□ -1.34
Sox3P53784 Gm14762-201ENSMUST00000105109 1771 ntBASIC6.67□□□□□ -1.34
Sox3P53784 4930505O20Rik-201ENSMUST00000142188 1758 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Sox3P53784 Skint7-201ENSMUST00000055014 1788 ntAPPRIS P3 TSL 1 (best) BASIC6.67□□□□□ -1.34
Sox3P53784 E330035G20Rik-202ENSMUST00000223323 3578 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Sox3P53784 Cyp2b23-201ENSMUST00000077356 2189 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
Sox3P53784 C630043F03Rik-201ENSMUST00000122923 2581 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Sox3P53784 Vmn1r181-208ENSMUST00000228842 4491 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
Sox3P53784 Pikfyve-201ENSMUST00000081154 11237 ntAPPRIS P3 TSL 1 (best) BASIC6.66□□□□□ -1.34
Sox3P53784 Gm17354-201ENSMUST00000170933 3039 ntTSL 5 BASIC6.66□□□□□ -1.34
Sox3P53784 Slco1a4-201ENSMUST00000032364 2252 ntAPPRIS P1 TSL 2 BASIC6.66□□□□□ -1.34
Sox3P53784 Smurf2-206ENSMUST00000167787 2358 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Sox3P53784 Cps1-201ENSMUST00000027144 5555 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Sox3P53784 Tbp-211ENSMUST00000162505 12794 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Sox3P53784 Pcyt1b-201ENSMUST00000045898 4888 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Sox3P53784 Olfr1346-203ENSMUST00000215302 4525 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
Sox3P53784 Uspl1-203ENSMUST00000117878 2931 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Sox3P53784 Olfr1451-202ENSMUST00000207997 1698 ntAPPRIS P1 TSL 3 BASIC6.66□□□□□ -1.34
Sox3P53784 Gm43279-201ENSMUST00000202376 2512 ntBASIC6.66□□□□□ -1.34
Sox3P53784 Igkv6-20-201ENSMUST00000103388 375 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
Sox3P53784 Rpl35a-203ENSMUST00000115076 519 ntAPPRIS P1 TSL 2 BASIC6.66□□□□□ -1.34
Sox3P53784 Gm12468-201ENSMUST00000116189 404 ntBASIC6.66□□□□□ -1.34
Sox3P53784 Gm12879-201ENSMUST00000120003 1182 ntBASIC6.66□□□□□ -1.34
Sox3P53784 Gm14202-201ENSMUST00000120121 311 ntBASIC6.66□□□□□ -1.34
Sox3P53784 Gm5166-201ENSMUST00000121332 573 ntBASIC6.66□□□□□ -1.34
Sox3P53784 Gm11434-201ENSMUST00000122379 629 ntBASIC6.66□□□□□ -1.34
Sox3P53784 Gm14547-201ENSMUST00000138341 371 ntTSL 5 BASIC6.66□□□□□ -1.34
Sox3P53784 Gm5871-201ENSMUST00000176461 718 ntBASIC6.66□□□□□ -1.34
Sox3P53784 Gm8101-201ENSMUST00000192796 478 ntBASIC6.66□□□□□ -1.34
Sox3P53784 Gm43904-201ENSMUST00000204945 379 ntTSL 5 BASIC6.66□□□□□ -1.34
Sox3P53784 Gm44613-202ENSMUST00000205962 691 ntTSL 3 BASIC6.66□□□□□ -1.34
Sox3P53784 Gm31897-202ENSMUST00000206231 604 ntTSL 3 BASIC6.66□□□□□ -1.34
Sox3P53784 Gm9357-201ENSMUST00000207138 805 ntBASIC6.66□□□□□ -1.34
Sox3P53784 Gm2975-201ENSMUST00000209710 820 ntBASIC6.66□□□□□ -1.34
Sox3P53784 Gm32515-201ENSMUST00000219396 350 ntTSL 2 BASIC6.66□□□□□ -1.34
Sox3P53784 4930520K02Rik-201ENSMUST00000219522 388 ntTSL 3 BASIC6.66□□□□□ -1.34
Sox3P53784 4930471E15Rik-201ENSMUST00000221147 626 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Sox3P53784 AC154323.2-201ENSMUST00000226557 1151 ntBASIC6.66□□□□□ -1.34
Sox3P53784 Rps29-201ENSMUST00000037023 390 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Sox3P53784 1700014D04Rik-201ENSMUST00000055343 795 ntBASIC6.66□□□□□ -1.34
Sox3P53784 P2ry12-204ENSMUST00000199609 2157 ntAPPRIS P1 TSL 3 BASIC6.66□□□□□ -1.34
Sox3P53784 Olfr1357-204ENSMUST00000213877 2161 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
Sox3P53784 Prkacb-204ENSMUST00000106138 3999 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Sox3P53784 Gm36041-201ENSMUST00000218971 2245 ntTSL 5 BASIC6.66□□□□□ -1.34
Sox3P53784 Muc5b-201ENSMUST00000165147 14964 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
Sox3P53784 Lef1-203ENSMUST00000098611 2298 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Sox3P53784 AC122346.1-201ENSMUST00000225266 3732 ntBASIC6.66□□□□□ -1.34
Sox3P53784 Gabpb2-202ENSMUST00000098873 8272 ntAPPRIS P2 TSL 5 BASIC6.66□□□□□ -1.34
Sox3P53784 Ptprz1-206ENSMUST00000202579 6871 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Sox3P53784 BC085271-201ENSMUST00000191852 1487 ntBASIC6.66□□□□□ -1.34
Sox3P53784 Mapre2-202ENSMUST00000115830 2496 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Sox3P53784 Gm45887-201ENSMUST00000212672 2998 ntBASIC6.66□□□□□ -1.34
Sox3P53784 Crtam-204ENSMUST00000188848 5001 ntAPPRIS P3 TSL 1 (best) BASIC6.66□□□□□ -1.34
Sox3P53784 Tek-202ENSMUST00000073939 4549 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Sox3P53784 Kif6-207ENSMUST00000162854 3528 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
Sox3P53784 Alb-201ENSMUST00000031314 2034 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Sox3P53784 Gm28965-201ENSMUST00000186015 1500 ntTSL 5 BASIC6.66□□□□□ -1.34
Sox3P53784 Chil3-201ENSMUST00000063062 1539 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Retrieved 100 of 76,532 protein–RNA pairs in 320.7 ms