Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Gm4962-201ENSMUST00000199640 2977 ntBASIC7.77□□□□□ -1.16
Sox1P53783 Cfap161-202ENSMUST00000119134 2868 ntAPPRIS ALT2 TSL 1 (best) BASIC7.77□□□□□ -1.16
Sox1P53783 Gm38352-201ENSMUST00000194459 2557 ntBASIC7.77□□□□□ -1.16
Sox1P53783 Gm16072-201ENSMUST00000119574 2377 ntBASIC7.77□□□□□ -1.17
Sox1P53783 Card6-201ENSMUST00000118365 5995 ntAPPRIS P1 TSL 5 BASIC7.77□□□□□ -1.17
Sox1P53783 Tph2-201ENSMUST00000006949 2626 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Sox1P53783 Vmn1r36-203ENSMUST00000226728 1458 ntBASIC7.77□□□□□ -1.17
Sox1P53783 Pik3ca-203ENSMUST00000108243 6689 ntAPPRIS P1 TSL 5 BASIC7.77□□□□□ -1.17
Sox1P53783 Gm22707-201ENSMUST00000103834 110 ntBASIC7.77□□□□□ -1.17
Sox1P53783 Gm25773-201ENSMUST00000116718 127 ntBASIC7.77□□□□□ -1.17
Sox1P53783 Gm11462-201ENSMUST00000117749 562 ntBASIC7.77□□□□□ -1.17
Sox1P53783 Gm2003-201ENSMUST00000118537 636 ntBASIC7.77□□□□□ -1.17
Sox1P53783 Gm15484-201ENSMUST00000118871 828 ntBASIC7.77□□□□□ -1.17
Sox1P53783 Gm13921-201ENSMUST00000119411 463 ntBASIC7.77□□□□□ -1.17
Sox1P53783 Gm11955-201ENSMUST00000119801 470 ntBASIC7.77□□□□□ -1.17
Sox1P53783 Gm15712-201ENSMUST00000120369 1156 ntBASIC7.77□□□□□ -1.17
Sox1P53783 Gm15618-201ENSMUST00000121610 452 ntBASIC7.77□□□□□ -1.17
Sox1P53783 Gm13586-201ENSMUST00000121784 464 ntBASIC7.77□□□□□ -1.17
Sox1P53783 Gm1989-201ENSMUST00000126244 636 ntBASIC7.77□□□□□ -1.17
Sox1P53783 Platr3-201ENSMUST00000146980 412 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Sox1P53783 Rpl29-203ENSMUST00000150576 733 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Sox1P53783 Gm26355-201ENSMUST00000158220 105 ntBASIC7.77□□□□□ -1.17
Sox1P53783 Gm17377-201ENSMUST00000165184 207 ntBASIC7.77□□□□□ -1.17
Sox1P53783 Vmn2r-ps72-201ENSMUST00000172586 907 ntBASIC7.77□□□□□ -1.17
Sox1P53783 Gm6726-201ENSMUST00000172786 681 ntBASIC7.77□□□□□ -1.17
Sox1P53783 Vmn2r-ps80-201ENSMUST00000173697 914 ntBASIC7.77□□□□□ -1.17
Sox1P53783 Vmn2r-ps85-201ENSMUST00000174022 940 ntBASIC7.77□□□□□ -1.17
Sox1P53783 Gm21900-201ENSMUST00000179612 543 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
Sox1P53783 Gm8993-201ENSMUST00000182182 983 ntBASIC7.77□□□□□ -1.17
Sox1P53783 Gm27008-202ENSMUST00000182414 604 ntTSL 3 BASIC7.77□□□□□ -1.17
Sox1P53783 Gm27159-201ENSMUST00000185132 432 ntTSL 5 BASIC7.77□□□□□ -1.17
Sox1P53783 Gm28113-201ENSMUST00000188280 229 ntBASIC7.77□□□□□ -1.17
Sox1P53783 Gm29562-201ENSMUST00000190113 904 ntBASIC7.77□□□□□ -1.17
Sox1P53783 Nanog-ps2-201ENSMUST00000190988 529 ntBASIC7.77□□□□□ -1.17
Sox1P53783 Gm43568-202ENSMUST00000198427 476 ntTSL 3 BASIC7.77□□□□□ -1.17
Sox1P53783 Gm43840-201ENSMUST00000199444 484 ntBASIC7.77□□□□□ -1.17
Sox1P53783 1700018P08Rik-201ENSMUST00000212522 1239 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Sox1P53783 Gm35454-202ENSMUST00000214817 1101 ntTSL 5 BASIC7.77□□□□□ -1.17
Sox1P53783 AC157017.2-201ENSMUST00000218354 777 ntBASIC7.77□□□□□ -1.17
Sox1P53783 CT025598.1-201ENSMUST00000225140 427 ntBASIC7.77□□□□□ -1.17
Sox1P53783 AV026068-229ENSMUST00000225516 595 ntBASIC7.77□□□□□ -1.17
Sox1P53783 AC137871.3-201ENSMUST00000226628 225 ntBASIC7.77□□□□□ -1.17
Sox1P53783 AC123665.3-201ENSMUST00000228735 1216 ntBASIC7.77□□□□□ -1.17
Sox1P53783 Olfr167-201ENSMUST00000054606 939 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
Sox1P53783 Olfr1406-201ENSMUST00000072395 1063 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
Sox1P53783 Gm23456-201ENSMUST00000083335 137 ntBASIC7.77□□□□□ -1.17
Sox1P53783 Gm6990-201ENSMUST00000086830 348 ntBASIC7.77□□□□□ -1.17
Sox1P53783 2610203C20Rik-204ENSMUST00000181214 3525 ntTSL 5 BASIC7.77□□□□□ -1.17
Sox1P53783 Mlip-210ENSMUST00000184322 2668 ntTSL 5 BASIC7.77□□□□□ -1.17
Sox1P53783 Plec-205ENSMUST00000073418 15455 ntAPPRIS ALT2 TSL 5 BASIC7.77□□□□□ -1.17
Sox1P53783 Depdc5-205ENSMUST00000120902 5195 ntAPPRIS ALT2 TSL 5 BASIC7.77□□□□□ -1.17
Sox1P53783 Pcdhb3-201ENSMUST00000051754 3787 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
Sox1P53783 Smpd4-209ENSMUST00000165363 3046 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Sox1P53783 Adgrb3-205ENSMUST00000135518 5432 ntAPPRIS P1 TSL 5 BASIC7.77□□□□□ -1.17
Sox1P53783 Slc12a8-205ENSMUST00000122314 2819 ntTSL 5 BASIC7.77□□□□□ -1.17
Sox1P53783 A630009H07Rik-201ENSMUST00000208485 2159 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Sox1P53783 Olfr1350-202ENSMUST00000207221 1521 ntAPPRIS P1 TSL 3 BASIC7.77□□□□□ -1.17
Sox1P53783 Lmod1-201ENSMUST00000059352 3948 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Sox1P53783 Ctage5-208ENSMUST00000175877 2612 ntTSL 5 BASIC7.77□□□□□ -1.17
Sox1P53783 Olfr117-202ENSMUST00000213638 3183 ntAPPRIS P1 TSL 5 BASIC7.77□□□□□ -1.17
Sox1P53783 Zfp825-202ENSMUST00000202645 1406 ntAPPRIS P2 TSL 1 (best) BASIC7.77□□□□□ -1.17
Sox1P53783 Lingo2-204ENSMUST00000108124 2414 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Sox1P53783 Adarb2-201ENSMUST00000064473 6721 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Sox1P53783 Gm7978-202ENSMUST00000201129 1897 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Sox1P53783 BC061212-201ENSMUST00000094587 1897 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Sox1P53783 Muc5ac-203ENSMUST00000163321 8505 ntAPPRIS ALT2 TSL 5 BASIC7.77□□□□□ -1.17
Sox1P53783 Slc5a6-205ENSMUST00000202520 3248 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Sox1P53783 Slc5a6-201ENSMUST00000080431 3218 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Sox1P53783 Chid1-203ENSMUST00000118694 3910 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Sox1P53783 Mettl16-205ENSMUST00000141755 12584 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Sox1P53783 C79130-201ENSMUST00000199610 4296 ntBASIC7.76□□□□□ -1.17
Sox1P53783 Aasdh-201ENSMUST00000069709 3381 ntAPPRIS P1 TSL 5 BASIC7.76□□□□□ -1.17
Sox1P53783 Pclo-202ENSMUST00000182407 16846 ntTSL 5 BASIC7.76□□□□□ -1.17
Sox1P53783 Nt5dc1-201ENSMUST00000047885 2743 ntAPPRIS P2 TSL 1 (best) BASIC7.76□□□□□ -1.17
Sox1P53783 Slco1a4-201ENSMUST00000032364 2252 ntAPPRIS P1 TSL 2 BASIC7.76□□□□□ -1.17
Sox1P53783 Lef1-203ENSMUST00000098611 2298 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Sox1P53783 Phc2-203ENSMUST00000106080 3885 ntAPPRIS P3 TSL 1 (best) BASIC7.76□□□□□ -1.17
Sox1P53783 Ppp3cc-203ENSMUST00000228911 1836 ntAPPRIS ALT2 BASIC7.76□□□□□ -1.17
Sox1P53783 Gm15509-201ENSMUST00000162615 2162 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Sox1P53783 Rbms3-212ENSMUST00000174868 2164 ntAPPRIS ALT2 TSL 1 (best) BASIC7.76□□□□□ -1.17
Sox1P53783 Zfp354a-203ENSMUST00000109119 2078 ntAPPRIS ALT2 TSL 5 BASIC7.76□□□□□ -1.17
Sox1P53783 Arhgef9-209ENSMUST00000181987 6222 ntTSL 2 BASIC7.76□□□□□ -1.17
Sox1P53783 Rhoh-201ENSMUST00000031106 5093 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Sox1P53783 Trbv29-201ENSMUST00000103281 353 ntAPPRIS P1 BASIC7.76□□□□□ -1.17
Sox1P53783 Cga-202ENSMUST00000108130 609 ntAPPRIS P1 TSL 5 BASIC7.76□□□□□ -1.17
Sox1P53783 Gm11889-201ENSMUST00000118402 1079 ntBASIC7.76□□□□□ -1.17
Sox1P53783 Csnk2a1-ps-201ENSMUST00000118846 1175 ntBASIC7.76□□□□□ -1.17
Sox1P53783 Gm11440-201ENSMUST00000121509 527 ntBASIC7.76□□□□□ -1.17
Sox1P53783 Gm14902-201ENSMUST00000145576 1007 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Sox1P53783 Gm15397-201ENSMUST00000145790 804 ntTSL 3 BASIC7.76□□□□□ -1.17
Sox1P53783 Gm29015-201ENSMUST00000187147 207 ntTSL 5 BASIC7.76□□□□□ -1.17
Sox1P53783 1700108F19Rik-207ENSMUST00000191384 210 ntTSL 3 BASIC7.76□□□□□ -1.17
Sox1P53783 Gm36928-201ENSMUST00000192466 694 ntBASIC7.76□□□□□ -1.17
Sox1P53783 Gm38061-201ENSMUST00000192490 365 ntBASIC7.76□□□□□ -1.17
Sox1P53783 Gm37325-201ENSMUST00000194971 694 ntBASIC7.76□□□□□ -1.17
Sox1P53783 Gm37291-201ENSMUST00000195637 533 ntTSL 5 BASIC7.76□□□□□ -1.17
Sox1P53783 Gm43346-201ENSMUST00000198290 685 ntTSL 2 BASIC7.76□□□□□ -1.17
Sox1P53783 C030038I04Rik-201ENSMUST00000207840 740 ntBASIC7.76□□□□□ -1.17
Sox1P53783 Gm45608-201ENSMUST00000210948 389 ntBASIC7.76□□□□□ -1.17
Sox1P53783 AC127581.1-201ENSMUST00000214084 771 ntTSL 5 BASIC7.76□□□□□ -1.17
Retrieved 100 of 76,532 protein–RNA pairs in 108.4 ms