Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Snhg17-209ENSMUST00000186993 3144 ntBASIC9.05□□□□□ -0.96
Col18a1P39061 Large1-201ENSMUST00000004497 3669 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Col18a1P39061 Cldn18-201ENSMUST00000035048 4172 ntAPPRIS P3 TSL 1 (best) BASIC9.05□□□□□ -0.96
Col18a1P39061 Sptb-202ENSMUST00000166101 8084 ntAPPRIS ALT2 TSL 5 BASIC9.05□□□□□ -0.96
Col18a1P39061 Kcnmb2-204ENSMUST00000191869 1552 ntTSL 5 BASIC9.05□□□□□ -0.96
Col18a1P39061 Gm28993-201ENSMUST00000186236 1499 ntTSL 5 BASIC9.05□□□□□ -0.96
Col18a1P39061 Gm37870-201ENSMUST00000192349 1499 ntTSL 5 BASIC9.05□□□□□ -0.96
Col18a1P39061 Gm37467-202ENSMUST00000192785 1499 ntTSL 5 BASIC9.05□□□□□ -0.96
Col18a1P39061 Gm37252-201ENSMUST00000195063 1499 ntTSL 5 BASIC9.05□□□□□ -0.96
Col18a1P39061 Gm38013-202ENSMUST00000195453 1499 ntTSL 5 BASIC9.05□□□□□ -0.96
Col18a1P39061 Gm37286-201ENSMUST00000195885 1499 ntTSL 5 BASIC9.05□□□□□ -0.96
Col18a1P39061 1810011H11Rik-201ENSMUST00000039191 1489 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Col18a1P39061 C130071C03Rik-201ENSMUST00000131907 3590 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Col18a1P39061 Bicral-201ENSMUST00000040624 6579 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Col18a1P39061 Cul4b-202ENSMUST00000050083 3090 ntAPPRIS P2 TSL 1 (best) BASIC9.05□□□□□ -0.96
Col18a1P39061 Mcm10-201ENSMUST00000027980 3494 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Col18a1P39061 Gm28839-201ENSMUST00000189579 2171 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Col18a1P39061 Srrm4os-201ENSMUST00000126959 3360 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Col18a1P39061 Cacna1c-219ENSMUST00000189389 6603 ntAPPRIS ALT2 TSL 5 BASIC9.04□□□□□ -0.96
Col18a1P39061 1700015I17Rik-201ENSMUST00000209585 2099 ntTSL 5 BASIC9.04□□□□□ -0.96
Col18a1P39061 6430573F11Rik-203ENSMUST00000147525 5820 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Col18a1P39061 Sub1-202ENSMUST00000110504 675 ntAPPRIS P1 TSL 5 BASIC9.04□□□□□ -0.96
Col18a1P39061 Gm13322-201ENSMUST00000152803 246 ntTSL 5 BASIC9.04□□□□□ -0.96
Col18a1P39061 Gm20506-201ENSMUST00000172952 589 ntTSL 3 BASIC9.04□□□□□ -0.96
Col18a1P39061 Mir3090-201ENSMUST00000175597 87 ntBASIC9.04□□□□□ -0.96
Col18a1P39061 Vmn2r-ps12-201ENSMUST00000175833 623 ntBASIC9.04□□□□□ -0.96
Col18a1P39061 Gm20691-201ENSMUST00000176889 333 ntBASIC9.04□□□□□ -0.96
Col18a1P39061 Gm4665-201ENSMUST00000183244 561 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Col18a1P39061 6030442E23Rik-201ENSMUST00000186618 642 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Col18a1P39061 Gm28616-201ENSMUST00000187344 441 ntTSL 5 BASIC9.04□□□□□ -0.96
Col18a1P39061 Gm8860-201ENSMUST00000193160 445 ntBASIC9.04□□□□□ -0.96
Col18a1P39061 Gm38217-201ENSMUST00000194358 910 ntBASIC9.04□□□□□ -0.96
Col18a1P39061 Ghrl-207ENSMUST00000204533 323 ntTSL 2 BASIC9.04□□□□□ -0.96
Col18a1P39061 Gm44705-201ENSMUST00000206719 339 ntBASIC9.04□□□□□ -0.96
Col18a1P39061 Gm4489-201ENSMUST00000219576 517 ntTSL 2 BASIC9.04□□□□□ -0.96
Col18a1P39061 4930452L12Rik-201ENSMUST00000220158 785 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Col18a1P39061 CT009713.5-201ENSMUST00000224508 909 ntBASIC9.04□□□□□ -0.96
Col18a1P39061 AC164618.3-201ENSMUST00000224863 681 ntBASIC9.04□□□□□ -0.96
Col18a1P39061 Gm38036-201ENSMUST00000194586 3564 ntBASIC9.04□□□□□ -0.96
Col18a1P39061 AC129308.2-203ENSMUST00000224109 2385 ntBASIC9.04□□□□□ -0.96
Col18a1P39061 Olfr1157-201ENSMUST00000099841 4621 ntAPPRIS P1 TSL 2 BASIC9.04□□□□□ -0.96
Col18a1P39061 Igf1os-202ENSMUST00000146581 2595 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Col18a1P39061 Kif5a-202ENSMUST00000217895 3996 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Col18a1P39061 D130040H23Rik-204ENSMUST00000212549 2002 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Col18a1P39061 Gm20796-201ENSMUST00000180355 5838 ntBASIC9.04□□□□□ -0.96
Col18a1P39061 Acacb-202ENSMUST00000102582 8788 ntAPPRIS P1 TSL 5 BASIC9.04□□□□□ -0.96
Col18a1P39061 Slc25a40-202ENSMUST00000170496 2602 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Col18a1P39061 AC131029.1-201ENSMUST00000226391 2929 ntBASIC9.04□□□□□ -0.96
Col18a1P39061 Elf5-201ENSMUST00000028609 2222 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Col18a1P39061 Mir124-2hg-201ENSMUST00000185804 3844 ntBASIC9.04□□□□□ -0.96
Col18a1P39061 Mcm7-208ENSMUST00000148879 1351 ntTSL 5 BASIC9.04□□□□□ -0.96
Col18a1P39061 4932411K12Rik-203ENSMUST00000210384 1351 ntTSL 5 BASIC9.04□□□□□ -0.96
Col18a1P39061 Pde1c-208ENSMUST00000170774 2132 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Col18a1P39061 Gm12768-201ENSMUST00000120055 759 ntBASIC9.04□□□□□ -0.96
Col18a1P39061 Gm7931-201ENSMUST00000121537 271 ntBASIC9.04□□□□□ -0.96
Col18a1P39061 Gm16276-201ENSMUST00000131218 262 ntBASIC9.04□□□□□ -0.96
Col18a1P39061 Gm16110-201ENSMUST00000161473 892 ntTSL 3 BASIC9.04□□□□□ -0.96
Col18a1P39061 Crnde-205ENSMUST00000179400 651 ntTSL 2 BASIC9.04□□□□□ -0.96
Col18a1P39061 1700010L04Rik-203ENSMUST00000179662 1015 ntTSL 5 BASIC9.04□□□□□ -0.96
Col18a1P39061 Gm43212-201ENSMUST00000198208 394 ntBASIC9.04□□□□□ -0.96
Col18a1P39061 Gm43646-201ENSMUST00000199962 464 ntTSL 3 BASIC9.04□□□□□ -0.96
Col18a1P39061 4933424M12Rik-202ENSMUST00000203451 1100 ntTSL 5 BASIC9.04□□□□□ -0.96
Col18a1P39061 4930480K02Rik-201ENSMUST00000203679 1054 ntBASIC9.04□□□□□ -0.96
Col18a1P39061 Olfr206-202ENSMUST00000207927 1122 ntAPPRIS P1 TSL 5 BASIC9.04□□□□□ -0.96
Col18a1P39061 Gm19033-201ENSMUST00000208516 964 ntBASIC9.04□□□□□ -0.96
Col18a1P39061 Irgm2-203ENSMUST00000209079 3528 ntAPPRIS ALT2 TSL 2 BASIC9.04□□□□□ -0.96
Col18a1P39061 Olfr1391-202ENSMUST00000215671 3235 ntAPPRIS P1 TSL 5 BASIC9.04□□□□□ -0.96
Col18a1P39061 Rgs7-201ENSMUST00000027812 1418 ntAPPRIS P3 TSL 5 BASIC9.04□□□□□ -0.96
Col18a1P39061 Gm37647-201ENSMUST00000194556 3143 ntBASIC9.04□□□□□ -0.96
Col18a1P39061 Nfkbiz-203ENSMUST00000114457 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Col18a1P39061 Olfr1394-202ENSMUST00000216273 3024 ntAPPRIS P1 TSL 5 BASIC9.03□□□□□ -0.96
Col18a1P39061 March1-201ENSMUST00000039540 2733 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Col18a1P39061 Rrm1-201ENSMUST00000033283 3997 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Col18a1P39061 Dnm3-201ENSMUST00000070330 4601 ntAPPRIS P2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Col18a1P39061 Nup188-201ENSMUST00000064447 5710 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Col18a1P39061 Gm37786-201ENSMUST00000191714 3225 ntBASIC9.03□□□□□ -0.96
Col18a1P39061 Smarca2-242ENSMUST00000208751 1846 ntTSL 5 BASIC9.03□□□□□ -0.96
Col18a1P39061 Atp13a4-202ENSMUST00000057018 4054 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Col18a1P39061 Exd1-203ENSMUST00000171024 5290 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Col18a1P39061 Prps2-201ENSMUST00000026839 3699 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Col18a1P39061 Atg16l2-201ENSMUST00000120267 6459 ntAPPRIS P2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Col18a1P39061 Cdc14b-202ENSMUST00000109769 2886 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Col18a1P39061 Ggta1-205ENSMUST00000113002 3391 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Col18a1P39061 B930025P03Rik-201ENSMUST00000207718 3085 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Col18a1P39061 Gm5949-201ENSMUST00000213468 1421 ntBASIC9.03□□□□□ -0.96
Col18a1P39061 Gm44812-201ENSMUST00000207627 5349 ntTSL 5 BASIC9.03□□□□□ -0.96
Col18a1P39061 Tnik-201ENSMUST00000159236 12276 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Col18a1P39061 Olfr408-ps1-201ENSMUST00000121710 941 ntBASIC9.03□□□□□ -0.96
Col18a1P39061 Gm20429-202ENSMUST00000174168 820 ntTSL 3 BASIC9.03□□□□□ -0.96
Col18a1P39061 Smim18-201ENSMUST00000179364 587 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Col18a1P39061 Gm21241-201ENSMUST00000179551 934 ntBASIC9.03□□□□□ -0.96
Col18a1P39061 Gm29582-201ENSMUST00000185667 931 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Col18a1P39061 Gm20838-202ENSMUST00000187712 931 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Col18a1P39061 1700040F15Rik-201ENSMUST00000188244 931 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Col18a1P39061 Gm21996-201ENSMUST00000188269 931 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Col18a1P39061 Gm21256-202ENSMUST00000188881 932 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Col18a1P39061 Gm28891-202ENSMUST00000189333 927 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Col18a1P39061 Gm28413-201ENSMUST00000189369 291 ntBASIC9.03□□□□□ -0.96
Col18a1P39061 Gm21094-202ENSMUST00000189577 926 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Col18a1P39061 Gm20792-201ENSMUST00000189765 931 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Retrieved 100 of 76,532 protein–RNA pairs in 86.4 ms