Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Smim18-201ENSMUST00000179364 587 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Sdc1P18828 Gm27288-201ENSMUST00000184215 80 ntBASIC5.5□□□□□ -1.53
Sdc1P18828 Gm27597-201ENSMUST00000184365 80 ntBASIC5.5□□□□□ -1.53
Sdc1P18828 Gm27506-201ENSMUST00000184558 80 ntBASIC5.5□□□□□ -1.53
Sdc1P18828 Gm27595-201ENSMUST00000184579 112 ntBASIC5.5□□□□□ -1.53
Sdc1P18828 Gm27529-201ENSMUST00000184975 80 ntBASIC5.5□□□□□ -1.53
Sdc1P18828 Gm27907-201ENSMUST00000185101 80 ntBASIC5.5□□□□□ -1.53
Sdc1P18828 Gm29353-201ENSMUST00000185801 620 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Sdc1P18828 Gm28869-201ENSMUST00000187199 811 ntTSL 3 BASIC5.5□□□□□ -1.53
Sdc1P18828 Gm28164-201ENSMUST00000190143 442 ntBASIC5.5□□□□□ -1.53
Sdc1P18828 Gm37800-201ENSMUST00000192129 664 ntTSL 5 BASIC5.5□□□□□ -1.53
Sdc1P18828 Gm8704-201ENSMUST00000197181 435 ntBASIC5.5□□□□□ -1.53
Sdc1P18828 Gm43656-201ENSMUST00000197882 434 ntBASIC5.5□□□□□ -1.53
Sdc1P18828 Gm3922-201ENSMUST00000200519 435 ntBASIC5.5□□□□□ -1.53
Sdc1P18828 Gm45259-201ENSMUST00000209217 1006 ntBASIC5.5□□□□□ -1.53
Sdc1P18828 Id2-201ENSMUST00000020974 1270 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Sdc1P18828 Gm33096-201ENSMUST00000210189 493 ntBASIC5.5□□□□□ -1.53
Sdc1P18828 CT010456.3-201ENSMUST00000221210 523 ntTSL 5 BASIC5.5□□□□□ -1.53
Sdc1P18828 4933413J09Rik-201ENSMUST00000022427 899 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Sdc1P18828 AC107757.1-201ENSMUST00000226780 357 ntBASIC5.5□□□□□ -1.53
Sdc1P18828 CT025618.1-201ENSMUST00000227409 1279 ntBASIC5.5□□□□□ -1.53
Sdc1P18828 Defb3-201ENSMUST00000033852 275 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Sdc1P18828 Tsga13-201ENSMUST00000048580 1141 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Sdc1P18828 Mir135b-201ENSMUST00000083501 97 ntBASIC5.5□□□□□ -1.53
Sdc1P18828 Vmn1r196-201ENSMUST00000091735 906 ntAPPRIS P2 BASIC5.5□□□□□ -1.53
Sdc1P18828 Gm13271-201ENSMUST00000094992 549 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Sdc1P18828 Olfr568-201ENSMUST00000098216 942 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Sdc1P18828 Gm38257-201ENSMUST00000195881 2761 ntBASIC5.5□□□□□ -1.53
Sdc1P18828 AC163032.1-201ENSMUST00000220671 2970 ntBASIC5.5□□□□□ -1.53
Sdc1P18828 Ube2v2-203ENSMUST00000115777 4207 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Sdc1P18828 Gm15425-201ENSMUST00000119013 2711 ntBASIC5.5□□□□□ -1.53
Sdc1P18828 Zfp788-203ENSMUST00000100275 3177 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Sdc1P18828 Nlrp10-201ENSMUST00000055745 4504 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Sdc1P18828 Themis-203ENSMUST00000105516 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
Sdc1P18828 Gm37342-201ENSMUST00000194588 4965 ntBASIC5.5□□□□□ -1.53
Sdc1P18828 Vmn2r25-201ENSMUST00000162046 2568 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Sdc1P18828 Brinp3-201ENSMUST00000074622 4023 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Sdc1P18828 Cntnap2-202ENSMUST00000114641 9827 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Sdc1P18828 Olfr1426-201ENSMUST00000112952 2697 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Sdc1P18828 Zfp937-201ENSMUST00000073782 2797 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Sdc1P18828 Olfr430-203ENSMUST00000214390 3300 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Sdc1P18828 Scd4-201ENSMUST00000058856 3306 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Sdc1P18828 Gm37541-201ENSMUST00000192464 2315 ntBASIC5.49□□□□□ -1.53
Sdc1P18828 Angptl1-202ENSMUST00000111720 1332 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Sdc1P18828 Lyz2-201ENSMUST00000092163 1316 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Sdc1P18828 Fstl5-203ENSMUST00000160261 3173 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Sdc1P18828 Rrh-201ENSMUST00000029648 1506 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
Sdc1P18828 Htr2a-201ENSMUST00000036653 5606 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Sdc1P18828 Tnfaip3-202ENSMUST00000105527 4334 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Sdc1P18828 Gm19368-201ENSMUST00000221258 4424 ntBASIC5.49□□□□□ -1.53
Sdc1P18828 Fkbp15-202ENSMUST00000084528 3329 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
Sdc1P18828 D330045A20Rik-202ENSMUST00000113030 3736 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
Sdc1P18828 Ighv14-3-201ENSMUST00000103469 399 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
Sdc1P18828 Trav8d-1-201ENSMUST00000103580 400 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
Sdc1P18828 Tmsb15a-202ENSMUST00000113154 544 ntTSL 5 BASIC5.49□□□□□ -1.53
Sdc1P18828 Gm22710-201ENSMUST00000116892 125 ntBASIC5.49□□□□□ -1.53
Sdc1P18828 Gm9836-201ENSMUST00000117132 216 ntBASIC5.49□□□□□ -1.53
Sdc1P18828 Mgst1-202ENSMUST00000118091 1030 ntTSL 2 BASIC5.49□□□□□ -1.53
Sdc1P18828 Mgst1-203ENSMUST00000120230 1027 ntAPPRIS P1 TSL 3 BASIC5.49□□□□□ -1.53
Sdc1P18828 Gm11809-201ENSMUST00000120923 950 ntBASIC5.49□□□□□ -1.53
Sdc1P18828 Gm13642-201ENSMUST00000121697 381 ntBASIC5.49□□□□□ -1.53
Sdc1P18828 Gm15644-201ENSMUST00000121764 387 ntBASIC5.49□□□□□ -1.53
Sdc1P18828 Cbx5-203ENSMUST00000122182 1146 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Sdc1P18828 Cnih1-202ENSMUST00000146629 789 ntTSL 5 BASIC5.49□□□□□ -1.53
Sdc1P18828 Gm13839-201ENSMUST00000151639 506 ntTSL 2 BASIC5.49□□□□□ -1.53
Sdc1P18828 Gm16494-201ENSMUST00000165525 261 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
Sdc1P18828 Sbp-205ENSMUST00000183017 700 ntTSL 5 BASIC5.49□□□□□ -1.53
Sdc1P18828 Gm21181-201ENSMUST00000186249 330 ntBASIC5.49□□□□□ -1.53
Sdc1P18828 Gm28149-201ENSMUST00000187102 378 ntBASIC5.49□□□□□ -1.53
Sdc1P18828 1700122H20Rik-201ENSMUST00000188950 421 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Sdc1P18828 Gm28768-201ENSMUST00000189034 378 ntBASIC5.49□□□□□ -1.53
Sdc1P18828 D7Ertd128e-201ENSMUST00000189744 928 ntTSL 2 BASIC5.49□□□□□ -1.53
Sdc1P18828 Txndc9-203ENSMUST00000192960 472 ntTSL 3 BASIC5.49□□□□□ -1.53
Sdc1P18828 Gm26901-202ENSMUST00000193106 256 ntTSL 3 BASIC5.49□□□□□ -1.53
Sdc1P18828 Pisrt1-201ENSMUST00000195532 515 ntBASIC5.49□□□□□ -1.53
Sdc1P18828 Gm17835-201ENSMUST00000196870 499 ntBASIC5.49□□□□□ -1.53
Sdc1P18828 Gm8290-201ENSMUST00000218202 477 ntBASIC5.49□□□□□ -1.53
Sdc1P18828 Abracl-203ENSMUST00000218994 425 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
Sdc1P18828 AC165349.2-201ENSMUST00000219097 426 ntBASIC5.49□□□□□ -1.53
Sdc1P18828 AC238940.2-201ENSMUST00000224202 330 ntBASIC5.49□□□□□ -1.53
Sdc1P18828 CT025667.1-201ENSMUST00000225872 382 ntBASIC5.49□□□□□ -1.53
Sdc1P18828 CT009556.4-201ENSMUST00000227092 200 ntBASIC5.49□□□□□ -1.53
Sdc1P18828 Cst12-201ENSMUST00000028932 644 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
Sdc1P18828 3300002A11Rik-201ENSMUST00000046994 654 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Sdc1P18828 Olfr905-201ENSMUST00000051111 937 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
Sdc1P18828 Vmn1r30-201ENSMUST00000078890 1053 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
Sdc1P18828 Vmn1r234-201ENSMUST00000079633 990 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
Sdc1P18828 n-R5s89-201ENSMUST00000083532 104 ntBASIC5.49□□□□□ -1.53
Sdc1P18828 Vmn1r198-201ENSMUST00000091733 903 ntAPPRIS P2 BASIC5.49□□□□□ -1.53
Sdc1P18828 Asxl3-201ENSMUST00000097655 11697 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Sdc1P18828 Gm18830-201ENSMUST00000199036 1396 ntBASIC5.49□□□□□ -1.53
Sdc1P18828 Naip3-201ENSMUST00000118082 4208 ntBASIC5.49□□□□□ -1.53
Sdc1P18828 Wdr35-202ENSMUST00000111113 4312 ntAPPRIS ALT1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Sdc1P18828 Gm43469-201ENSMUST00000196084 4634 ntBASIC5.49□□□□□ -1.53
Sdc1P18828 Gm43363-201ENSMUST00000201590 2647 ntBASIC5.49□□□□□ -1.53
Sdc1P18828 Gm32736-201ENSMUST00000200427 2701 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Sdc1P18828 Naip2-203ENSMUST00000167986 4356 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
Sdc1P18828 Anapc10-203ENSMUST00000210812 4591 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Sdc1P18828 D030045P18Rik-202ENSMUST00000213571 2370 ntBASIC5.49□□□□□ -1.53
Sdc1P18828 9430053O09Rik-201ENSMUST00000192654 2570 ntBASIC5.49□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 62.1 ms