Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Gm25969-201ENSMUST00000157166 132 ntBASIC7.46□□□□□ -1.22
Chmp6P0C0A3 Mir1929-201ENSMUST00000158635 93 ntBASIC7.46□□□□□ -1.22
Chmp6P0C0A3 Gm16138-201ENSMUST00000159341 821 ntBASIC7.46□□□□□ -1.22
Chmp6P0C0A3 Gm15734-201ENSMUST00000163076 1040 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
Chmp6P0C0A3 Obox4-ps30-201ENSMUST00000176032 948 ntBASIC7.46□□□□□ -1.22
Chmp6P0C0A3 Gm4956-202ENSMUST00000178869 672 ntBASIC7.46□□□□□ -1.22
Chmp6P0C0A3 Gm20917-201ENSMUST00000179922 990 ntAPPRIS P1 BASIC7.46□□□□□ -1.22
Chmp6P0C0A3 Gm26570-201ENSMUST00000180672 342 ntBASIC7.46□□□□□ -1.22
Chmp6P0C0A3 Gm17750-201ENSMUST00000182477 529 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
Chmp6P0C0A3 Gm27204-201ENSMUST00000184673 527 ntTSL 2 BASIC7.46□□□□□ -1.22
Chmp6P0C0A3 Gm38204-201ENSMUST00000194835 619 ntTSL 2 BASIC7.46□□□□□ -1.22
Chmp6P0C0A3 Gm42580-201ENSMUST00000197223 753 ntBASIC7.46□□□□□ -1.22
Chmp6P0C0A3 Kitl-201ENSMUST00000020129 1260 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
Chmp6P0C0A3 Olfr587-ps1-202ENSMUST00000209201 477 ntBASIC7.46□□□□□ -1.22
Chmp6P0C0A3 Olfr1010-201ENSMUST00000216831 1270 ntAPPRIS P1 TSL 3 BASIC7.46□□□□□ -1.22
Chmp6P0C0A3 4930555G07Rik-201ENSMUST00000218226 634 ntTSL 3 BASIC7.46□□□□□ -1.22
Chmp6P0C0A3 Gm3678-201ENSMUST00000218888 492 ntBASIC7.46□□□□□ -1.22
Chmp6P0C0A3 Gm46231-201ENSMUST00000220152 314 ntBASIC7.46□□□□□ -1.22
Chmp6P0C0A3 AC108947.1-201ENSMUST00000224274 1000 ntBASIC7.46□□□□□ -1.22
Chmp6P0C0A3 A1cf-203ENSMUST00000224400 1204 ntBASIC7.46□□□□□ -1.22
Chmp6P0C0A3 AC125405.2-201ENSMUST00000227862 383 ntBASIC7.46□□□□□ -1.22
Chmp6P0C0A3 Olfr109-201ENSMUST00000031086 945 ntAPPRIS P1 BASIC7.46□□□□□ -1.22
Chmp6P0C0A3 Olfr653-201ENSMUST00000098174 1046 ntAPPRIS P1 BASIC7.46□□□□□ -1.22
Chmp6P0C0A3 Zdhhc11-201ENSMUST00000091493 1460 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
Chmp6P0C0A3 Gm30948-201ENSMUST00000195683 4827 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
Chmp6P0C0A3 Psg21-202ENSMUST00000182128 2066 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
Chmp6P0C0A3 Psg21-201ENSMUST00000094793 2074 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
Chmp6P0C0A3 Foxp1-206ENSMUST00000113326 7029 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
Chmp6P0C0A3 Hapln1-201ENSMUST00000022108 5715 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
Chmp6P0C0A3 Gm15448-205ENSMUST00000189095 1905 ntTSL 5 BASIC7.46□□□□□ -1.22
Chmp6P0C0A3 Gm45657-201ENSMUST00000211318 1349 ntBASIC7.46□□□□□ -1.22
Chmp6P0C0A3 Akr1c20-202ENSMUST00000080361 1337 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
Chmp6P0C0A3 AY512931-201ENSMUST00000139751 2395 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
Chmp6P0C0A3 Nlrc3-204ENSMUST00000180200 3842 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
Chmp6P0C0A3 Zeb2-213ENSMUST00000176732 1762 ntTSL 5 BASIC7.46□□□□□ -1.22
Chmp6P0C0A3 Gm3072-201ENSMUST00000167712 1395 ntAPPRIS P1 TSL 5 BASIC7.46□□□□□ -1.22
Chmp6P0C0A3 Trim43b-202ENSMUST00000189557 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC7.45□□□□□ -1.22
Chmp6P0C0A3 Abcc9-201ENSMUST00000073173 7433 ntAPPRIS ALT2 TSL 5 BASIC7.45□□□□□ -1.22
Chmp6P0C0A3 Csta1-201ENSMUST00000096090 2783 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Chmp6P0C0A3 Exph5-201ENSMUST00000051014 5957 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Chmp6P0C0A3 Olfr11-202ENSMUST00000205631 3265 ntAPPRIS P1 TSL 3 BASIC7.45□□□□□ -1.22
Chmp6P0C0A3 Golph3l-207ENSMUST00000177390 2836 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Chmp6P0C0A3 Tmcc3-203ENSMUST00000117929 3317 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Chmp6P0C0A3 Gm15081-201ENSMUST00000119794 844 ntBASIC7.45□□□□□ -1.22
Chmp6P0C0A3 BC064078-201ENSMUST00000122939 570 ntBASIC7.45□□□□□ -1.22
Chmp6P0C0A3 Il4-203ENSMUST00000140684 530 ntTSL 2 BASIC7.45□□□□□ -1.22
Chmp6P0C0A3 C230035I16Rik-201ENSMUST00000141543 623 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Chmp6P0C0A3 4931413K12Rik-201ENSMUST00000142068 1282 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Chmp6P0C0A3 A430048G15Rik-201ENSMUST00000149965 627 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Chmp6P0C0A3 Gm22728-201ENSMUST00000158087 129 ntBASIC7.45□□□□□ -1.22
Chmp6P0C0A3 Gm16113-201ENSMUST00000159629 372 ntBASIC7.45□□□□□ -1.22
Chmp6P0C0A3 Pid1-205ENSMUST00000176720 450 ntTSL 5 BASIC7.45□□□□□ -1.22
Chmp6P0C0A3 Rpp14-202ENSMUST00000180369 477 ntAPPRIS P1 BASIC7.45□□□□□ -1.22
Chmp6P0C0A3 Gm4340-203ENSMUST00000181615 1258 ntAPPRIS P5 TSL 2 BASIC7.45□□□□□ -1.22
Chmp6P0C0A3 Gm27014-201ENSMUST00000182658 937 ntBASIC7.45□□□□□ -1.22
Chmp6P0C0A3 Ighv1-21-201ENSMUST00000194856 351 ntBASIC7.45□□□□□ -1.22
Chmp6P0C0A3 Gm38102-202ENSMUST00000196428 174 ntTSL 5 BASIC7.45□□□□□ -1.22
Chmp6P0C0A3 Igkv4-77-201ENSMUST00000199410 352 ntBASIC7.45□□□□□ -1.22
Chmp6P0C0A3 Klrb1-ps1-202ENSMUST00000203057 414 ntTSL 5 BASIC7.45□□□□□ -1.22
Chmp6P0C0A3 Gm43964-201ENSMUST00000203570 301 ntTSL 3 BASIC7.45□□□□□ -1.22
Chmp6P0C0A3 Lncbate1-201ENSMUST00000211953 812 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Chmp6P0C0A3 AC131660.1-201ENSMUST00000215630 1062 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Chmp6P0C0A3 AC131912.1-201ENSMUST00000217527 290 ntTSL 5 BASIC7.45□□□□□ -1.22
Chmp6P0C0A3 AC155709.1-201ENSMUST00000218794 162 ntBASIC7.45□□□□□ -1.22
Chmp6P0C0A3 5033421B08Rik-202ENSMUST00000219595 1194 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Chmp6P0C0A3 D830013O20Rik-202ENSMUST00000221180 683 ntTSL 2 BASIC7.45□□□□□ -1.22
Chmp6P0C0A3 CT030705.2-201ENSMUST00000225301 556 ntBASIC7.45□□□□□ -1.22
Chmp6P0C0A3 AC138765.3-201ENSMUST00000227981 423 ntBASIC7.45□□□□□ -1.22
Chmp6P0C0A3 Il4-201ENSMUST00000000889 590 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Chmp6P0C0A3 Ptprd-220ENSMUST00000174831 4518 ntTSL 5 BASIC7.45□□□□□ -1.22
Chmp6P0C0A3 Gm43775-201ENSMUST00000201019 3395 ntBASIC7.45□□□□□ -1.22
Chmp6P0C0A3 4930579H20Rik-201ENSMUST00000187815 1516 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Chmp6P0C0A3 Prokr2-204ENSMUST00000142766 3932 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Chmp6P0C0A3 Nipa2-203ENSMUST00000119041 2979 ntAPPRIS P1 TSL 5 BASIC7.45□□□□□ -1.22
Chmp6P0C0A3 Olfr566-203ENSMUST00000213481 2040 ntAPPRIS ALT1 TSL 3 BASIC7.45□□□□□ -1.22
Chmp6P0C0A3 Ttf1-201ENSMUST00000100237 4160 ntAPPRIS P1 TSL 5 BASIC7.45□□□□□ -1.22
Chmp6P0C0A3 Vmn1r218-202ENSMUST00000226692 10430 ntAPPRIS P2 BASIC7.45□□□□□ -1.22
Chmp6P0C0A3 Cd59a-203ENSMUST00000168176 1806 ntAPPRIS P1 TSL 2 BASIC7.45□□□□□ -1.22
Chmp6P0C0A3 Saa4-201ENSMUST00000006952 2094 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Chmp6P0C0A3 Efcab14-201ENSMUST00000074425 4300 ntAPPRIS P2 TSL 1 (best) BASIC7.45□□□□□ -1.22
Chmp6P0C0A3 Slc6a20a-203ENSMUST00000171647 3894 ntTSL 5 BASIC7.45□□□□□ -1.22
Chmp6P0C0A3 Slamf1-201ENSMUST00000015460 2693 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Chmp6P0C0A3 Utrn-201ENSMUST00000076817 12382 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Chmp6P0C0A3 Impg2-204ENSMUST00000160116 3992 ntAPPRIS ALT2 TSL 1 (best) BASIC7.44□□□□□ -1.22
Chmp6P0C0A3 Acsm2-207ENSMUST00000167935 6738 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Chmp6P0C0A3 Vps8-207ENSMUST00000122235 2521 ntTSL 5 BASIC7.44□□□□□ -1.22
Chmp6P0C0A3 Cxcr1-202ENSMUST00000190313 1451 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
Chmp6P0C0A3 Nr1h5-203ENSMUST00000196983 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC7.44□□□□□ -1.22
Chmp6P0C0A3 Gm45516-201ENSMUST00000211588 4182 ntBASIC7.44□□□□□ -1.22
Chmp6P0C0A3 BC053393-201ENSMUST00000050937 2020 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Chmp6P0C0A3 Vmn1r90-204ENSMUST00000226802 7185 ntAPPRIS P2 BASIC7.44□□□□□ -1.22
Chmp6P0C0A3 Gm20043-201ENSMUST00000222267 2565 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
Chmp6P0C0A3 Gm8279-202ENSMUST00000165713 1760 ntAPPRIS P5 TSL 5 BASIC7.44□□□□□ -1.22
Chmp6P0C0A3 Gm5795-203ENSMUST00000171150 1758 ntAPPRIS ALT2 TSL 5 BASIC7.44□□□□□ -1.22
Chmp6P0C0A3 Gm10475-201ENSMUST00000084713 1796 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
Chmp6P0C0A3 Emsy-207ENSMUST00000205911 5079 ntTSL 5 BASIC7.44□□□□□ -1.22
Chmp6P0C0A3 Zhx1-203ENSMUST00000175805 4839 ntAPPRIS P1 TSL 5 BASIC7.44□□□□□ -1.22
Chmp6P0C0A3 Ccdc175-201ENSMUST00000021494 2622 ntAPPRIS P1 TSL 5 BASIC7.44□□□□□ -1.22
Chmp6P0C0A3 Rnase4-201ENSMUST00000022428 1518 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Chmp6P0C0A3 Olfr446-201ENSMUST00000101461 927 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
Retrieved 100 of 76,532 protein–RNA pairs in 56.3 ms