Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Klhl13-202ENSMUST00000115313 3251 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Pcdh1F7BJK1 Gm43023-201ENSMUST00000197583 2106 ntBASIC6.68□□□□□ -1.34
Pcdh1F7BJK1 Gm31410-201ENSMUST00000217302 4048 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Pcdh1F7BJK1 Olfr60-202ENSMUST00000210932 2383 ntAPPRIS P1 TSL 2 BASIC6.68□□□□□ -1.34
Pcdh1F7BJK1 AC159809.2-202ENSMUST00000214073 3333 ntTSL 5 BASIC6.68□□□□□ -1.34
Pcdh1F7BJK1 Lilrb4a-203ENSMUST00000219696 1441 ntAPPRIS P5 TSL 1 (best) BASIC6.68□□□□□ -1.34
Pcdh1F7BJK1 AC158988.1-201ENSMUST00000226731 2624 ntBASIC6.68□□□□□ -1.34
Pcdh1F7BJK1 Gen1-201ENSMUST00000166117 5268 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Pcdh1F7BJK1 Kif15-201ENSMUST00000040717 4858 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Pcdh1F7BJK1 Pikfyve-201ENSMUST00000081154 11237 ntAPPRIS P3 TSL 1 (best) BASIC6.68□□□□□ -1.34
Pcdh1F7BJK1 Trp63-205ENSMUST00000115306 4691 ntAPPRIS ALT1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Pcdh1F7BJK1 Gm11217-201ENSMUST00000141162 1729 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Pcdh1F7BJK1 Gm18451-201ENSMUST00000196759 1719 ntBASIC6.68□□□□□ -1.34
Pcdh1F7BJK1 Gm36041-201ENSMUST00000218971 2245 ntTSL 5 BASIC6.68□□□□□ -1.34
Pcdh1F7BJK1 Gm15681-201ENSMUST00000137501 2704 ntBASIC6.68□□□□□ -1.34
Pcdh1F7BJK1 Phc1-208ENSMUST00000160696 4213 ntAPPRIS P3 TSL 1 (best) BASIC6.68□□□□□ -1.34
Pcdh1F7BJK1 Grip1-208ENSMUST00000138410 3532 ntAPPRIS P3 TSL 1 (best) BASIC6.68□□□□□ -1.34
Pcdh1F7BJK1 Cps1-201ENSMUST00000027144 5555 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Pcdh1F7BJK1 Cyp2c29-202ENSMUST00000176624 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
Pcdh1F7BJK1 Gm22934-201ENSMUST00000103961 132 ntBASIC6.68□□□□□ -1.34
Pcdh1F7BJK1 Gm22150-201ENSMUST00000104447 135 ntBASIC6.68□□□□□ -1.34
Pcdh1F7BJK1 Tardbp-205ENSMUST00000105700 923 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Pcdh1F7BJK1 Babam2-203ENSMUST00000114507 1143 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Pcdh1F7BJK1 Gm14509-201ENSMUST00000117312 1286 ntBASIC6.68□□□□□ -1.34
Pcdh1F7BJK1 Gm15576-201ENSMUST00000117806 583 ntBASIC6.68□□□□□ -1.34
Pcdh1F7BJK1 Gm12604-201ENSMUST00000118382 380 ntBASIC6.68□□□□□ -1.34
Pcdh1F7BJK1 Gm13160-201ENSMUST00000118441 627 ntBASIC6.68□□□□□ -1.34
Pcdh1F7BJK1 Gm12034-201ENSMUST00000119032 399 ntBASIC6.68□□□□□ -1.34
Pcdh1F7BJK1 Gm14375-201ENSMUST00000119490 855 ntBASIC6.68□□□□□ -1.34
Pcdh1F7BJK1 Olfr1127-ps1-201ENSMUST00000119555 892 ntBASIC6.68□□□□□ -1.34
Pcdh1F7BJK1 Gm12287-201ENSMUST00000119770 707 ntBASIC6.68□□□□□ -1.34
Pcdh1F7BJK1 Gm14414-201ENSMUST00000120833 573 ntBASIC6.68□□□□□ -1.34
Pcdh1F7BJK1 Gm14623-201ENSMUST00000121398 603 ntBASIC6.68□□□□□ -1.34
Pcdh1F7BJK1 Gm11933-201ENSMUST00000121550 375 ntBASIC6.68□□□□□ -1.34
Pcdh1F7BJK1 Gm12754-201ENSMUST00000121908 454 ntBASIC6.68□□□□□ -1.34
Pcdh1F7BJK1 Gm12594-201ENSMUST00000132140 499 ntTSL 3 BASIC6.68□□□□□ -1.34
Pcdh1F7BJK1 Gm14764-201ENSMUST00000147130 313 ntTSL 5 BASIC6.68□□□□□ -1.34
Pcdh1F7BJK1 Mir1983-201ENSMUST00000157523 132 ntBASIC6.68□□□□□ -1.34
Pcdh1F7BJK1 Gm23497-201ENSMUST00000157738 130 ntBASIC6.68□□□□□ -1.34
Pcdh1F7BJK1 Hsd11b1-203ENSMUST00000160929 1256 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
Pcdh1F7BJK1 Gm17051-201ENSMUST00000170787 487 ntBASIC6.68□□□□□ -1.34
Pcdh1F7BJK1 Gm2877-201ENSMUST00000178248 1204 ntBASIC6.68□□□□□ -1.34
Pcdh1F7BJK1 Trav9d-2-201ENSMUST00000178824 337 ntAPPRIS ALT2 BASIC6.68□□□□□ -1.34
Pcdh1F7BJK1 Gm8324-201ENSMUST00000178911 1204 ntBASIC6.68□□□□□ -1.34
Pcdh1F7BJK1 Trav9n-2-201ENSMUST00000180097 337 ntAPPRIS ALT2 BASIC6.68□□□□□ -1.34
Pcdh1F7BJK1 Gm26269-201ENSMUST00000180144 126 ntBASIC6.68□□□□□ -1.34
Pcdh1F7BJK1 4930445N18Rik-201ENSMUST00000180631 886 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Pcdh1F7BJK1 Gm27288-201ENSMUST00000184215 80 ntBASIC6.68□□□□□ -1.34
Pcdh1F7BJK1 Gm27597-201ENSMUST00000184365 80 ntBASIC6.68□□□□□ -1.34
Pcdh1F7BJK1 Gm27506-201ENSMUST00000184558 80 ntBASIC6.68□□□□□ -1.34
Pcdh1F7BJK1 Gm27529-201ENSMUST00000184975 80 ntBASIC6.68□□□□□ -1.34
Pcdh1F7BJK1 Gm27907-201ENSMUST00000185101 80 ntBASIC6.68□□□□□ -1.34
Pcdh1F7BJK1 Gm3259-205ENSMUST00000185432 1077 ntTSL 3 BASIC6.68□□□□□ -1.34
Pcdh1F7BJK1 Gm18356-201ENSMUST00000185677 623 ntBASIC6.68□□□□□ -1.34
Pcdh1F7BJK1 Gm28958-201ENSMUST00000185864 703 ntBASIC6.68□□□□□ -1.34
Pcdh1F7BJK1 Gm8307-201ENSMUST00000187682 1150 ntBASIC6.68□□□□□ -1.34
Pcdh1F7BJK1 Gm29273-201ENSMUST00000188880 262 ntBASIC6.68□□□□□ -1.34
Pcdh1F7BJK1 Gm28648-201ENSMUST00000190092 343 ntBASIC6.68□□□□□ -1.34
Pcdh1F7BJK1 1700016D06Rik-202ENSMUST00000190741 604 ntTSL 2 BASIC6.68□□□□□ -1.34
Pcdh1F7BJK1 Gm5541-201ENSMUST00000193248 1113 ntBASIC6.68□□□□□ -1.34
Pcdh1F7BJK1 C630050I24Rik-201ENSMUST00000193420 783 ntBASIC6.68□□□□□ -1.34
Pcdh1F7BJK1 Gm37395-201ENSMUST00000194721 697 ntBASIC6.68□□□□□ -1.34
Pcdh1F7BJK1 Gm36997-201ENSMUST00000195090 707 ntBASIC6.68□□□□□ -1.34
Pcdh1F7BJK1 Rrh-205ENSMUST00000196902 1250 ntAPPRIS P2 TSL 1 (best) BASIC6.68□□□□□ -1.34
Pcdh1F7BJK1 Gm23011-202ENSMUST00000197855 275 ntBASIC6.68□□□□□ -1.34
Pcdh1F7BJK1 4930448I18Rik-201ENSMUST00000197958 736 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Pcdh1F7BJK1 Gm42424-201ENSMUST00000198319 376 ntBASIC6.68□□□□□ -1.34
Pcdh1F7BJK1 Gm43809-201ENSMUST00000200694 338 ntTSL 3 BASIC6.68□□□□□ -1.34
Pcdh1F7BJK1 Gm18537-201ENSMUST00000205709 989 ntBASIC6.68□□□□□ -1.34
Pcdh1F7BJK1 Mcee-204ENSMUST00000206882 391 ntTSL 2 BASIC6.68□□□□□ -1.34
Pcdh1F7BJK1 Gm34597-201ENSMUST00000211189 633 ntTSL 5 BASIC6.68□□□□□ -1.34
Pcdh1F7BJK1 Olfr858-ps1-201ENSMUST00000212591 930 ntBASIC6.68□□□□□ -1.34
Pcdh1F7BJK1 AC164087.1-201ENSMUST00000215174 733 ntTSL 3 BASIC6.68□□□□□ -1.34
Pcdh1F7BJK1 Gm39383-201ENSMUST00000216894 1009 ntTSL 5 BASIC6.68□□□□□ -1.34
Pcdh1F7BJK1 AC111046.1-201ENSMUST00000217715 412 ntBASIC6.68□□□□□ -1.34
Pcdh1F7BJK1 Atp8b3-202ENSMUST00000219648 524 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Pcdh1F7BJK1 AC069562.1-201ENSMUST00000224206 434 ntBASIC6.68□□□□□ -1.34
Pcdh1F7BJK1 AC122309.1-201ENSMUST00000226945 421 ntBASIC6.68□□□□□ -1.34
Pcdh1F7BJK1 AC154627.1-201ENSMUST00000228799 1286 ntBASIC6.68□□□□□ -1.34
Pcdh1F7BJK1 Pdcd10-201ENSMUST00000029424 907 ntTSL 5 BASIC6.68□□□□□ -1.34
Pcdh1F7BJK1 1700049L16Rik-201ENSMUST00000049520 543 ntBASIC6.68□□□□□ -1.34
Pcdh1F7BJK1 Tas2r119-201ENSMUST00000057633 1006 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
Pcdh1F7BJK1 Tardbp-203ENSMUST00000095719 1011 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Pcdh1F7BJK1 Clrn1-202ENSMUST00000055636 3083 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Pcdh1F7BJK1 Trdc-201ENSMUST00000196323 3865 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
Pcdh1F7BJK1 Nos2-201ENSMUST00000018610 4192 ntAPPRIS P2 TSL 1 (best) BASIC6.68□□□□□ -1.34
Pcdh1F7BJK1 Cspp1-217ENSMUST00000186294 3429 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
Pcdh1F7BJK1 Ncl-201ENSMUST00000027438 8202 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Pcdh1F7BJK1 D6Ertd474e-201ENSMUST00000100817 2149 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Pcdh1F7BJK1 Deup1-202ENSMUST00000115592 2918 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Pcdh1F7BJK1 Scyl3-203ENSMUST00000161908 3718 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
Pcdh1F7BJK1 Slu7-206ENSMUST00000178622 3566 ntAPPRIS P1 TSL 2 BASIC6.68□□□□□ -1.34
Pcdh1F7BJK1 Gm37426-201ENSMUST00000195241 2470 ntBASIC6.68□□□□□ -1.34
Pcdh1F7BJK1 Pvt1-202ENSMUST00000181416 3319 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Pcdh1F7BJK1 Apobec3-209ENSMUST00000176325 2765 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
Pcdh1F7BJK1 Dzank1-204ENSMUST00000163701 6834 ntAPPRIS ALT2 TSL 5 BASIC6.67□□□□□ -1.34
Pcdh1F7BJK1 Olfr1285-202ENSMUST00000220153 1430 ntTSL 5 BASIC6.67□□□□□ -1.34
Pcdh1F7BJK1 Gm20767-202ENSMUST00000225683 1427 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
Pcdh1F7BJK1 Dnajc8-202ENSMUST00000094657 1401 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Pcdh1F7BJK1 Vmn1r15-201ENSMUST00000228297 2021 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
Retrieved 100 of 76,532 protein–RNA pairs in 63.6 ms