Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Senp1-201ENSMUST00000044189 6575 ntAPPRIS P2 TSL 1 (best) BASIC8.49□□□□□ -1.05
Trim11Q99PQ2 Gm26720-201ENSMUST00000181260 3538 ntTSL 5 BASIC8.49□□□□□ -1.05
Trim11Q99PQ2 Gm15907-201ENSMUST00000134284 2309 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Trim11Q99PQ2 Magea10-201ENSMUST00000088481 1821 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Trim11Q99PQ2 Olfr1357-204ENSMUST00000213877 2161 ntAPPRIS P1 TSL 5 BASIC8.49□□□□□ -1.05
Trim11Q99PQ2 Hdac9-204ENSMUST00000209750 3204 ntAPPRIS P5 TSL 5 BASIC8.49□□□□□ -1.05
Trim11Q99PQ2 Huwe1-201ENSMUST00000026292 14579 ntAPPRIS P2 TSL 1 (best) BASIC8.49□□□□□ -1.05
Trim11Q99PQ2 Mbd5-202ENSMUST00000112745 6037 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Trim11Q99PQ2 AC124414.1-201ENSMUST00000218033 2946 ntBASIC8.49□□□□□ -1.05
Trim11Q99PQ2 Alkbh8-206ENSMUST00000212294 2584 ntAPPRIS ALT2 TSL 1 (best) BASIC8.49□□□□□ -1.05
Trim11Q99PQ2 Gm37783-201ENSMUST00000192025 1856 ntBASIC8.49□□□□□ -1.05
Trim11Q99PQ2 Ttc17-201ENSMUST00000055081 3163 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Trim11Q99PQ2 Itgb3bp-204ENSMUST00000146258 2806 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Trim11Q99PQ2 Pabpc4l-201ENSMUST00000166505 5218 ntAPPRIS P1 TSL 2 BASIC8.48□□□□□ -1.05
Trim11Q99PQ2 AC123629.1-201ENSMUST00000225669 1364 ntBASIC8.48□□□□□ -1.05
Trim11Q99PQ2 Rp1-201ENSMUST00000027032 6869 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Trim11Q99PQ2 Hmg20a-201ENSMUST00000034879 3778 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Trim11Q99PQ2 Olfr1346-203ENSMUST00000215302 4525 ntAPPRIS P1 TSL 5 BASIC8.48□□□□□ -1.05
Trim11Q99PQ2 Lipk-201ENSMUST00000054260 2125 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Trim11Q99PQ2 A830082K12Rik-207ENSMUST00000183171 4176 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Trim11Q99PQ2 Zfp2-203ENSMUST00000116378 3069 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Trim11Q99PQ2 Morc1-201ENSMUST00000023330 3050 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Trim11Q99PQ2 Gm6356-201ENSMUST00000166618 1757 ntAPPRIS P1 TSL 5 BASIC8.48□□□□□ -1.05
Trim11Q99PQ2 Gm28906-201ENSMUST00000191371 1779 ntBASIC8.48□□□□□ -1.05
Trim11Q99PQ2 Gm31410-201ENSMUST00000217302 4048 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Trim11Q99PQ2 Zfp207-203ENSMUST00000108216 2152 ntTSL 2 BASIC8.48□□□□□ -1.05
Trim11Q99PQ2 Nrcam-201ENSMUST00000020939 4469 ntAPPRIS P4 TSL 1 (best) BASIC8.48□□□□□ -1.05
Trim11Q99PQ2 Myo1h-205ENSMUST00000169347 3545 ntAPPRIS ALT2 TSL 5 BASIC8.48□□□□□ -1.05
Trim11Q99PQ2 Ptprg-202ENSMUST00000119888 2787 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Trim11Q99PQ2 Mfap1b-201ENSMUST00000056732 3362 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Trim11Q99PQ2 Cd209b-201ENSMUST00000084086 2039 ntAPPRIS P4 TSL 1 (best) BASIC8.48□□□□□ -1.05
Trim11Q99PQ2 Recql5-201ENSMUST00000021097 3971 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Trim11Q99PQ2 Mageb16-ps1-201ENSMUST00000117991 1127 ntBASIC8.48□□□□□ -1.05
Trim11Q99PQ2 Gm14300-201ENSMUST00000120800 946 ntBASIC8.48□□□□□ -1.05
Trim11Q99PQ2 Defa33-201ENSMUST00000120874 426 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Trim11Q99PQ2 Gm11203-201ENSMUST00000122169 741 ntBASIC8.48□□□□□ -1.05
Trim11Q99PQ2 Gm21990-201ENSMUST00000124692 383 ntBASIC8.48□□□□□ -1.05
Trim11Q99PQ2 Ino80c-202ENSMUST00000125169 756 ntTSL 3 BASIC8.48□□□□□ -1.05
Trim11Q99PQ2 Olfr1134-202ENSMUST00000135875 1291 ntAPPRIS P1 TSL 5 BASIC8.48□□□□□ -1.05
Trim11Q99PQ2 Gm12828-201ENSMUST00000136115 289 ntTSL 3 BASIC8.48□□□□□ -1.05
Trim11Q99PQ2 Gm11695-201ENSMUST00000144230 407 ntTSL 2 BASIC8.48□□□□□ -1.05
Trim11Q99PQ2 Gm15230-201ENSMUST00000153701 510 ntTSL 2 BASIC8.48□□□□□ -1.05
Trim11Q99PQ2 Gm16034-201ENSMUST00000156446 480 ntTSL 2 BASIC8.48□□□□□ -1.05
Trim11Q99PQ2 Gm22038-201ENSMUST00000157277 242 ntBASIC8.48□□□□□ -1.05
Trim11Q99PQ2 Mir1962-201ENSMUST00000157516 121 ntBASIC8.48□□□□□ -1.05
Trim11Q99PQ2 Gm24498-201ENSMUST00000158445 102 ntBASIC8.48□□□□□ -1.05
Trim11Q99PQ2 Gm16026-202ENSMUST00000159695 772 ntBASIC8.48□□□□□ -1.05
Trim11Q99PQ2 Spink14-202ENSMUST00000162265 542 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Trim11Q99PQ2 Defa2-201ENSMUST00000170275 426 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Trim11Q99PQ2 Vmn1r-ps80-201ENSMUST00000174838 966 ntBASIC8.48□□□□□ -1.05
Trim11Q99PQ2 Vmn1r-ps142-201ENSMUST00000175707 852 ntBASIC8.48□□□□□ -1.05
Trim11Q99PQ2 Gm9381-201ENSMUST00000182285 1012 ntBASIC8.48□□□□□ -1.05
Trim11Q99PQ2 Gm18254-201ENSMUST00000185699 1204 ntBASIC8.48□□□□□ -1.05
Trim11Q99PQ2 Gm8304-201ENSMUST00000185744 584 ntBASIC8.48□□□□□ -1.05
Trim11Q99PQ2 Gm20587-201ENSMUST00000186367 1186 ntBASIC8.48□□□□□ -1.05
Trim11Q99PQ2 Gm28100-201ENSMUST00000186560 582 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Trim11Q99PQ2 Gm18033-201ENSMUST00000186678 550 ntBASIC8.48□□□□□ -1.05
Trim11Q99PQ2 1700122H20Rik-201ENSMUST00000188950 421 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Trim11Q99PQ2 Gm37175-201ENSMUST00000192023 587 ntTSL 5 BASIC8.48□□□□□ -1.05
Trim11Q99PQ2 Gm43301-201ENSMUST00000198918 778 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Trim11Q99PQ2 Gm44006-201ENSMUST00000204273 396 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Trim11Q99PQ2 Gm36371-201ENSMUST00000209043 1103 ntBASIC8.48□□□□□ -1.05
Trim11Q99PQ2 Gm18851-201ENSMUST00000210087 1058 ntBASIC8.48□□□□□ -1.05
Trim11Q99PQ2 Gm8667-201ENSMUST00000211112 449 ntBASIC8.48□□□□□ -1.05
Trim11Q99PQ2 Gm18039-201ENSMUST00000217816 728 ntBASIC8.48□□□□□ -1.05
Trim11Q99PQ2 AC163651.1-201ENSMUST00000222500 372 ntBASIC8.48□□□□□ -1.05
Trim11Q99PQ2 AC163041.2-201ENSMUST00000223082 573 ntBASIC8.48□□□□□ -1.05
Trim11Q99PQ2 AC114916.1-201ENSMUST00000228465 494 ntBASIC8.48□□□□□ -1.05
Trim11Q99PQ2 Rps6-ps1-201ENSMUST00000074205 750 ntBASIC8.48□□□□□ -1.05
Trim11Q99PQ2 mt-Td-201ENSMUST00000082404 70 ntBASIC8.48□□□□□ -1.05
Trim11Q99PQ2 Gm10247-201ENSMUST00000090395 333 ntBASIC8.48□□□□□ -1.05
Trim11Q99PQ2 Larp1b-204ENSMUST00000099121 1030 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Trim11Q99PQ2 Olfr1160-201ENSMUST00000099839 960 ntBASIC8.48□□□□□ -1.05
Trim11Q99PQ2 Olfr1053-201ENSMUST00000099897 942 ntAPPRIS P1 BASIC8.48□□□□□ -1.05
Trim11Q99PQ2 8430437L04Rik-201ENSMUST00000124829 1663 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Trim11Q99PQ2 Gm37274-201ENSMUST00000192167 1682 ntBASIC8.48□□□□□ -1.05
Trim11Q99PQ2 Gm28240-201ENSMUST00000187560 2053 ntBASIC8.48□□□□□ -1.05
Trim11Q99PQ2 Skil-202ENSMUST00000117728 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC8.48□□□□□ -1.05
Trim11Q99PQ2 Phf21a-207ENSMUST00000111293 3900 ntAPPRIS ALT2 TSL 5 BASIC8.48□□□□□ -1.05
Trim11Q99PQ2 Tnik-214ENSMUST00000162485 3918 ntAPPRIS ALT2 TSL 5 BASIC8.48□□□□□ -1.05
Trim11Q99PQ2 AC124421.1-201ENSMUST00000219114 4154 ntBASIC8.48□□□□□ -1.05
Trim11Q99PQ2 Olfr472-201ENSMUST00000209670 5290 ntAPPRIS P1 TSL 3 BASIC8.48□□□□□ -1.05
Trim11Q99PQ2 Htt-201ENSMUST00000080036 13215 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Trim11Q99PQ2 H60c-201ENSMUST00000170893 2817 ntAPPRIS P2 TSL 1 (best) BASIC8.48□□□□□ -1.05
Trim11Q99PQ2 Lrrc40-201ENSMUST00000072080 4142 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Trim11Q99PQ2 Zfp938-201ENSMUST00000041264 2035 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Trim11Q99PQ2 Myot-202ENSMUST00000115498 2087 ntAPPRIS P1 TSL 5 BASIC8.47□□□□□ -1.05
Trim11Q99PQ2 Gm16429-201ENSMUST00000179824 1446 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Trim11Q99PQ2 2310039L15Rik-202ENSMUST00000219492 3743 ntTSL 5 BASIC8.47□□□□□ -1.05
Trim11Q99PQ2 4833407H14Rik-201ENSMUST00000180442 1485 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Trim11Q99PQ2 Meiob-201ENSMUST00000024972 1703 ntAPPRIS P1 TSL 5 BASIC8.47□□□□□ -1.05
Trim11Q99PQ2 Slc37a3-201ENSMUST00000090243 4030 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Trim11Q99PQ2 Dpy19l1-201ENSMUST00000115277 4747 ntTSL 2 BASIC8.47□□□□□ -1.05
Trim11Q99PQ2 Gm15913-201ENSMUST00000118492 331 ntBASIC8.47□□□□□ -1.05
Trim11Q99PQ2 Gm11343-201ENSMUST00000120579 599 ntBASIC8.47□□□□□ -1.05
Trim11Q99PQ2 Tctex1d1-203ENSMUST00000125417 859 ntAPPRIS ALT2 TSL 5 BASIC8.47□□□□□ -1.05
Trim11Q99PQ2 Trav8-2-201ENSMUST00000130122 337 ntBASIC8.47□□□□□ -1.05
Trim11Q99PQ2 Gm11482-201ENSMUST00000147067 719 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Trim11Q99PQ2 Ttc39aos1-201ENSMUST00000150239 796 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Trim11Q99PQ2 Tmem27-201ENSMUST00000015545 1262 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Retrieved 100 of 76,532 protein–RNA pairs in 128.5 ms