Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 AC131660.1-201ENSMUST00000215630 1062 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Clp1Q99LI9 Gm5654-201ENSMUST00000217787 475 ntBASIC8.12□□□□□ -1.11
Clp1Q99LI9 CT030662.3-201ENSMUST00000228751 476 ntBASIC8.12□□□□□ -1.11
Clp1Q99LI9 Olfr1509-201ENSMUST00000045066 1010 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
Clp1Q99LI9 Cox7b2-201ENSMUST00000050129 542 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Clp1Q99LI9 Olfr299-201ENSMUST00000057734 993 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
Clp1Q99LI9 Mup4-201ENSMUST00000075973 922 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Clp1Q99LI9 Zfp781-201ENSMUST00000076281 732 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
Clp1Q99LI9 Rpl31-ps4-201ENSMUST00000079114 390 ntBASIC8.12□□□□□ -1.11
Clp1Q99LI9 Gm23054-201ENSMUST00000082804 162 ntBASIC8.12□□□□□ -1.11
Clp1Q99LI9 Rpl31-ps9-201ENSMUST00000086596 378 ntBASIC8.12□□□□□ -1.11
Clp1Q99LI9 Olfr618-201ENSMUST00000098197 957 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
Clp1Q99LI9 Olfr1006-202ENSMUST00000216084 1572 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
Clp1Q99LI9 Myadm-204ENSMUST00000203566 4028 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Clp1Q99LI9 Gm5546-201ENSMUST00000056145 2777 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Clp1Q99LI9 Ciao1-201ENSMUST00000003759 3075 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Clp1Q99LI9 Tcf4-207ENSMUST00000114985 8577 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Clp1Q99LI9 Gm6502-201ENSMUST00000086050 1533 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
Clp1Q99LI9 Vmn1r61-201ENSMUST00000164880 1818 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
Clp1Q99LI9 Gm42772-201ENSMUST00000199945 3041 ntBASIC8.12□□□□□ -1.11
Clp1Q99LI9 Sbno1-216ENSMUST00000199808 10161 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Clp1Q99LI9 Gapt-201ENSMUST00000058806 2069 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Clp1Q99LI9 Zkscan7-201ENSMUST00000063980 4722 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Clp1Q99LI9 Gm9268-201ENSMUST00000166914 2586 ntAPPRIS ALT2 TSL 5 BASIC8.12□□□□□ -1.11
Clp1Q99LI9 Gm31181-201ENSMUST00000217731 2283 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Clp1Q99LI9 Phactr2-204ENSMUST00000105546 2808 ntAPPRIS ALT2 TSL 5 BASIC8.11□□□□□ -1.11
Clp1Q99LI9 Gm16316-201ENSMUST00000154065 3393 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Clp1Q99LI9 Med13l-202ENSMUST00000201010 7781 ntAPPRIS ALT2 TSL 5 BASIC8.11□□□□□ -1.11
Clp1Q99LI9 Trps1-206ENSMUST00000184458 5293 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
Clp1Q99LI9 Gm36737-201ENSMUST00000209653 2189 ntTSL 5 BASIC8.11□□□□□ -1.11
Clp1Q99LI9 Acox3-210ENSMUST00000202266 3501 ntAPPRIS ALT2 TSL 5 BASIC8.11□□□□□ -1.11
Clp1Q99LI9 Ypel2-201ENSMUST00000018571 4847 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Clp1Q99LI9 Gm12667-201ENSMUST00000118299 1332 ntBASIC8.11□□□□□ -1.11
Clp1Q99LI9 Platr8-201ENSMUST00000146110 1349 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Clp1Q99LI9 AC123832.1-201ENSMUST00000214120 2371 ntBASIC8.11□□□□□ -1.11
Clp1Q99LI9 Map1b-201ENSMUST00000064762 11808 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Clp1Q99LI9 Olfr313-202ENSMUST00000217506 2612 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
Clp1Q99LI9 Pus10-201ENSMUST00000020520 1813 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Clp1Q99LI9 Hibch-201ENSMUST00000044478 1830 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Clp1Q99LI9 Phc2-203ENSMUST00000106080 3885 ntAPPRIS P3 TSL 1 (best) BASIC8.11□□□□□ -1.11
Clp1Q99LI9 Gip-201ENSMUST00000103156 607 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
Clp1Q99LI9 Ighv1-19-201ENSMUST00000103505 348 ntAPPRIS ALT2 BASIC8.11□□□□□ -1.11
Clp1Q99LI9 Gm23437-201ENSMUST00000104036 127 ntBASIC8.11□□□□□ -1.11
Clp1Q99LI9 Kpna2-202ENSMUST00000106768 541 ntTSL 2 BASIC8.11□□□□□ -1.11
Clp1Q99LI9 Gm15316-201ENSMUST00000121082 421 ntBASIC8.11□□□□□ -1.11
Clp1Q99LI9 Gm13024-201ENSMUST00000121756 718 ntBASIC8.11□□□□□ -1.11
Clp1Q99LI9 Usp46os1-201ENSMUST00000129275 508 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Clp1Q99LI9 Cox7c-204ENSMUST00000132233 709 ntTSL 2 BASIC8.11□□□□□ -1.11
Clp1Q99LI9 Gm17194-201ENSMUST00000164610 348 ntBASIC8.11□□□□□ -1.11
Clp1Q99LI9 4430402I18Rik-206ENSMUST00000164777 1066 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Clp1Q99LI9 Gm3594-201ENSMUST00000169152 997 ntAPPRIS ALT2 TSL 5 BASIC8.11□□□□□ -1.11
Clp1Q99LI9 Gm20663-201ENSMUST00000176647 474 ntTSL 3 BASIC8.11□□□□□ -1.11
Clp1Q99LI9 Gm24417-201ENSMUST00000178123 79 ntBASIC8.11□□□□□ -1.11
Clp1Q99LI9 Gm24653-201ENSMUST00000178541 79 ntBASIC8.11□□□□□ -1.11
Clp1Q99LI9 Gm25934-201ENSMUST00000178642 79 ntBASIC8.11□□□□□ -1.11
Clp1Q99LI9 Gtpbp4-ps2-201ENSMUST00000184058 256 ntBASIC8.11□□□□□ -1.11
Clp1Q99LI9 Gm29318-201ENSMUST00000185308 975 ntTSL 5 BASIC8.11□□□□□ -1.11
Clp1Q99LI9 Olfr576-202ENSMUST00000185326 927 ntTSL 5 BASIC8.11□□□□□ -1.11
Clp1Q99LI9 Gm29576-201ENSMUST00000188020 678 ntBASIC8.11□□□□□ -1.11
Clp1Q99LI9 Gm28354-201ENSMUST00000190904 678 ntBASIC8.11□□□□□ -1.11
Clp1Q99LI9 Gm29459-201ENSMUST00000191359 518 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Clp1Q99LI9 Gm8182-201ENSMUST00000197863 769 ntBASIC8.11□□□□□ -1.11
Clp1Q99LI9 Gm43100-201ENSMUST00000202985 674 ntTSL 5 BASIC8.11□□□□□ -1.11
Clp1Q99LI9 Smarca2-238ENSMUST00000208589 1054 ntTSL 5 BASIC8.11□□□□□ -1.11
Clp1Q99LI9 Gm39232-201ENSMUST00000210760 1012 ntTSL 5 BASIC8.11□□□□□ -1.11
Clp1Q99LI9 Gm45766-201ENSMUST00000211900 478 ntTSL 3 BASIC8.11□□□□□ -1.11
Clp1Q99LI9 CT030124.1-201ENSMUST00000217130 235 ntBASIC8.11□□□□□ -1.11
Clp1Q99LI9 Olfr1139-ps1-201ENSMUST00000217634 168 ntBASIC8.11□□□□□ -1.11
Clp1Q99LI9 AC120383.1-201ENSMUST00000221123 573 ntTSL 3 BASIC8.11□□□□□ -1.11
Clp1Q99LI9 AC163651.1-201ENSMUST00000222500 372 ntBASIC8.11□□□□□ -1.11
Clp1Q99LI9 AC160114.2-201ENSMUST00000223021 300 ntBASIC8.11□□□□□ -1.11
Clp1Q99LI9 AC124103.1-201ENSMUST00000227564 1027 ntBASIC8.11□□□□□ -1.11
Clp1Q99LI9 AC122459.3-201ENSMUST00000228508 1042 ntBASIC8.11□□□□□ -1.11
Clp1Q99LI9 Gm15421-201ENSMUST00000051985 443 ntTSL 3 BASIC8.11□□□□□ -1.11
Clp1Q99LI9 Gm17728-201ENSMUST00000076982 399 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
Clp1Q99LI9 n-R5s41-201ENSMUST00000083025 119 ntBASIC8.11□□□□□ -1.11
Clp1Q99LI9 H2-M9-201ENSMUST00000087165 1125 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Clp1Q99LI9 Vmn1r168-201ENSMUST00000098704 930 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
Clp1Q99LI9 Gm31520-202ENSMUST00000203574 1524 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Clp1Q99LI9 Srp54a-201ENSMUST00000021407 1515 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
Clp1Q99LI9 Folh1-202ENSMUST00000107271 2516 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
Clp1Q99LI9 Celf2-221ENSMUST00000182706 2525 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Clp1Q99LI9 Slc12a3-201ENSMUST00000034218 3299 ntAPPRIS P2 TSL 1 (best) BASIC8.11□□□□□ -1.11
Clp1Q99LI9 Gm6284-201ENSMUST00000209609 4287 ntBASIC8.11□□□□□ -1.11
Clp1Q99LI9 Pygl-202ENSMUST00000161083 2992 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Clp1Q99LI9 Nudt13-201ENSMUST00000022343 2494 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Clp1Q99LI9 Depdc5-205ENSMUST00000120902 5195 ntAPPRIS ALT2 TSL 5 BASIC8.11□□□□□ -1.11
Clp1Q99LI9 AC153945.1-201ENSMUST00000217761 1722 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Clp1Q99LI9 AC154681.1-201ENSMUST00000225876 1735 ntBASIC8.11□□□□□ -1.11
Clp1Q99LI9 P2ry4-201ENSMUST00000053373 4434 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Clp1Q99LI9 Lepr-201ENSMUST00000037552 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
Clp1Q99LI9 Hgf-203ENSMUST00000196645 2189 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Clp1Q99LI9 Gm10623-201ENSMUST00000209081 2639 ntBASIC8.11□□□□□ -1.11
Clp1Q99LI9 Srek1ip1-201ENSMUST00000022230 2365 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Clp1Q99LI9 Atl3-201ENSMUST00000025668 6376 ntAPPRIS P3 TSL 1 (best) BASIC8.11□□□□□ -1.11
Clp1Q99LI9 Zzz3-203ENSMUST00000106101 7539 ntAPPRIS P3 TSL 5 BASIC8.11□□□□□ -1.11
Clp1Q99LI9 Top3a-202ENSMUST00000102668 3542 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
Clp1Q99LI9 Ablim3-202ENSMUST00000166783 4213 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Clp1Q99LI9 Pcdh11x-201ENSMUST00000050239 4442 ntAPPRIS ALT2 TSL 5 BASIC8.11□□□□□ -1.11
Clp1Q99LI9 A430072C10Rik-201ENSMUST00000197848 2532 ntBASIC8.1□□□□□ -1.11
Retrieved 100 of 76,532 protein–RNA pairs in 67.2 ms