Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 Dusp21-201ENSMUST00000026018 845 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
Brf1Q8CFK2 Olfr1361-201ENSMUST00000055615 954 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
Brf1Q8CFK2 Olfr691-201ENSMUST00000057528 969 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
Brf1Q8CFK2 Prl7a1-201ENSMUST00000006659 940 ntAPPRIS P3 TSL 1 (best) BASIC8.3□□□□□ -1.08
Brf1Q8CFK2 Zfp626-201ENSMUST00000080175 816 ntTSL 5 BASIC8.3□□□□□ -1.08
Brf1Q8CFK2 4930402F06Rik-202ENSMUST00000113010 1372 ntAPPRIS P3 TSL 1 (best) BASIC8.3□□□□□ -1.08
Brf1Q8CFK2 Zfp473-204ENSMUST00000120798 3559 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
Brf1Q8CFK2 Skint10-201ENSMUST00000060327 1376 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Brf1Q8CFK2 Olfr1155-203ENSMUST00000215903 2122 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
Brf1Q8CFK2 AC138765.2-202ENSMUST00000228418 3435 ntBASIC8.3□□□□□ -1.08
Brf1Q8CFK2 Gdpd4-201ENSMUST00000041860 3053 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Brf1Q8CFK2 AC124572.1-201ENSMUST00000218155 2406 ntBASIC8.3□□□□□ -1.08
Brf1Q8CFK2 Rfc1-201ENSMUST00000172732 4699 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
Brf1Q8CFK2 Ank3-239ENSMUST00000183148 7404 ntAPPRIS ALT2 TSL 5 BASIC8.3□□□□□ -1.08
Brf1Q8CFK2 Gm37410-201ENSMUST00000193623 3039 ntBASIC8.29□□□□□ -1.08
Brf1Q8CFK2 Stab2-201ENSMUST00000035288 8228 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Brf1Q8CFK2 Kcne3-203ENSMUST00000178946 1323 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Brf1Q8CFK2 Gm40893-201ENSMUST00000220507 1508 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Brf1Q8CFK2 4931406B18Rik-203ENSMUST00000163619 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
Brf1Q8CFK2 Usp14-202ENSMUST00000116669 2019 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Brf1Q8CFK2 Lrp2-201ENSMUST00000080953 15460 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
Brf1Q8CFK2 Gm12468-201ENSMUST00000116189 404 ntBASIC8.29□□□□□ -1.08
Brf1Q8CFK2 Gm6181-201ENSMUST00000117187 264 ntBASIC8.29□□□□□ -1.08
Brf1Q8CFK2 Gm7910-201ENSMUST00000117896 835 ntBASIC8.29□□□□□ -1.08
Brf1Q8CFK2 Gm15712-201ENSMUST00000120369 1156 ntBASIC8.29□□□□□ -1.08
Brf1Q8CFK2 Gm14070-201ENSMUST00000120773 428 ntBASIC8.29□□□□□ -1.08
Brf1Q8CFK2 9630013K17Rik-201ENSMUST00000146915 1072 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Brf1Q8CFK2 Gm25722-201ENSMUST00000157498 279 ntBASIC8.29□□□□□ -1.08
Brf1Q8CFK2 Gm22533-201ENSMUST00000158821 274 ntBASIC8.29□□□□□ -1.08
Brf1Q8CFK2 Obox4-ps30-201ENSMUST00000176032 948 ntBASIC8.29□□□□□ -1.08
Brf1Q8CFK2 Scgb2b12-201ENSMUST00000183195 511 ntAPPRIS P1 TSL 2 BASIC8.29□□□□□ -1.08
Brf1Q8CFK2 1700123O21Rik-201ENSMUST00000190515 677 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Brf1Q8CFK2 Ccl2-201ENSMUST00000000193 813 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Brf1Q8CFK2 Gm43141-201ENSMUST00000199695 274 ntBASIC8.29□□□□□ -1.08
Brf1Q8CFK2 Gm44111-201ENSMUST00000204649 399 ntBASIC8.29□□□□□ -1.08
Brf1Q8CFK2 Gm29154-205ENSMUST00000213325 1112 ntTSL 5 BASIC8.29□□□□□ -1.08
Brf1Q8CFK2 AC166902.2-201ENSMUST00000215193 837 ntTSL 5 BASIC8.29□□□□□ -1.08
Brf1Q8CFK2 AC150661.1-201ENSMUST00000222563 495 ntBASIC8.29□□□□□ -1.08
Brf1Q8CFK2 Gm34047-201ENSMUST00000223547 606 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Brf1Q8CFK2 AC154461.5-201ENSMUST00000225429 774 ntBASIC8.29□□□□□ -1.08
Brf1Q8CFK2 AC154730.1-201ENSMUST00000227874 816 ntBASIC8.29□□□□□ -1.08
Brf1Q8CFK2 Rps27rt-201ENSMUST00000053150 374 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
Brf1Q8CFK2 Tnfrsf22-202ENSMUST00000084396 564 ntAPPRIS P3 TSL 2 BASIC8.29□□□□□ -1.08
Brf1Q8CFK2 Btnl10-202ENSMUST00000069941 4400 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Brf1Q8CFK2 Lmbrd2-204ENSMUST00000227556 8099 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
Brf1Q8CFK2 Trappc13-206ENSMUST00000179891 1689 ntAPPRIS ALT1 TSL 5 BASIC8.29□□□□□ -1.08
Brf1Q8CFK2 Olfr525-202ENSMUST00000214594 5137 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
Brf1Q8CFK2 Olfr1412-202ENSMUST00000190505 3663 ntAPPRIS P1 TSL 3 BASIC8.29□□□□□ -1.08
Brf1Q8CFK2 Bdnf-201ENSMUST00000053317 4266 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Brf1Q8CFK2 Eif4e-201ENSMUST00000029803 4991 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
Brf1Q8CFK2 Cdk5rap2-206ENSMUST00000144099 11847 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Brf1Q8CFK2 Lpin1-204ENSMUST00000221230 4114 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
Brf1Q8CFK2 Gm10855-201ENSMUST00000100426 2541 ntBASIC8.29□□□□□ -1.08
Brf1Q8CFK2 Stxbp4-202ENSMUST00000107872 2529 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Brf1Q8CFK2 Mbd4-202ENSMUST00000122816 2415 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Brf1Q8CFK2 Gm14548-201ENSMUST00000070639 2128 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
Brf1Q8CFK2 AC165260.6-206ENSMUST00000223884 3698 ntBASIC8.28□□□□□ -1.08
Brf1Q8CFK2 Phc3-204ENSMUST00000108255 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC8.28□□□□□ -1.08
Brf1Q8CFK2 Klhl13-203ENSMUST00000115316 3064 ntTSL 5 BASIC8.28□□□□□ -1.08
Brf1Q8CFK2 AC129308.2-203ENSMUST00000224109 2385 ntBASIC8.28□□□□□ -1.08
Brf1Q8CFK2 AC159002.2-201ENSMUST00000228843 4874 ntBASIC8.28□□□□□ -1.08
Brf1Q8CFK2 Tmc3-203ENSMUST00000164944 3306 ntAPPRIS ALT2 TSL 5 BASIC8.28□□□□□ -1.08
Brf1Q8CFK2 Stc1-201ENSMUST00000014957 4197 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Brf1Q8CFK2 Olfr727-202ENSMUST00000215317 2616 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
Brf1Q8CFK2 Gm38120-201ENSMUST00000195506 4642 ntBASIC8.28□□□□□ -1.08
Brf1Q8CFK2 Mak-206ENSMUST00000225084 3573 ntAPPRIS ALT2 BASIC8.28□□□□□ -1.08
Brf1Q8CFK2 Trps1-201ENSMUST00000077935 4436 ntAPPRIS P3 TSL 1 (best) BASIC8.28□□□□□ -1.08
Brf1Q8CFK2 Esf1-201ENSMUST00000046030 3396 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Brf1Q8CFK2 Gm7690-201ENSMUST00000190885 1399 ntBASIC8.28□□□□□ -1.08
Brf1Q8CFK2 Clasp1-210ENSMUST00000188710 10265 ntAPPRIS ALT2 TSL 5 BASIC8.28□□□□□ -1.08
Brf1Q8CFK2 6430710C18Rik-202ENSMUST00000125746 509 ntTSL 5 BASIC8.28□□□□□ -1.08
Brf1Q8CFK2 Gm14503-201ENSMUST00000130337 1164 ntBASIC8.28□□□□□ -1.08
Brf1Q8CFK2 Gm11657-201ENSMUST00000137175 337 ntTSL 3 BASIC8.28□□□□□ -1.08
Brf1Q8CFK2 Gm22552-201ENSMUST00000157796 337 ntBASIC8.28□□□□□ -1.08
Brf1Q8CFK2 Gm24680-201ENSMUST00000158759 126 ntBASIC8.28□□□□□ -1.08
Brf1Q8CFK2 Gm15872-201ENSMUST00000162454 1108 ntTSL 3 BASIC8.28□□□□□ -1.08
Brf1Q8CFK2 Gm44-201ENSMUST00000172155 993 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
Brf1Q8CFK2 Gm24157-201ENSMUST00000175265 111 ntBASIC8.28□□□□□ -1.08
Brf1Q8CFK2 Gm20865-201ENSMUST00000179095 856 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
Brf1Q8CFK2 Gm27360-201ENSMUST00000183487 80 ntBASIC8.28□□□□□ -1.08
Brf1Q8CFK2 Gm28739-201ENSMUST00000185415 696 ntBASIC8.28□□□□□ -1.08
Brf1Q8CFK2 Gm28219-201ENSMUST00000185452 696 ntBASIC8.28□□□□□ -1.08
Brf1Q8CFK2 Gm28542-201ENSMUST00000185545 696 ntBASIC8.28□□□□□ -1.08
Brf1Q8CFK2 Gm28303-201ENSMUST00000185642 747 ntBASIC8.28□□□□□ -1.08
Brf1Q8CFK2 Gm29244-201ENSMUST00000185825 696 ntBASIC8.28□□□□□ -1.08
Brf1Q8CFK2 Gm29437-201ENSMUST00000185865 696 ntBASIC8.28□□□□□ -1.08
Brf1Q8CFK2 Gm29412-201ENSMUST00000185869 696 ntBASIC8.28□□□□□ -1.08
Brf1Q8CFK2 Gm28910-201ENSMUST00000185921 696 ntBASIC8.28□□□□□ -1.08
Brf1Q8CFK2 Gm28812-201ENSMUST00000185963 696 ntBASIC8.28□□□□□ -1.08
Brf1Q8CFK2 Gm29468-201ENSMUST00000185978 696 ntBASIC8.28□□□□□ -1.08
Brf1Q8CFK2 Gm28335-201ENSMUST00000186204 696 ntBASIC8.28□□□□□ -1.08
Brf1Q8CFK2 Gm28854-201ENSMUST00000186218 696 ntBASIC8.28□□□□□ -1.08
Brf1Q8CFK2 Gm28636-201ENSMUST00000186353 696 ntBASIC8.28□□□□□ -1.08
Brf1Q8CFK2 Gm28452-201ENSMUST00000186623 696 ntBASIC8.28□□□□□ -1.08
Brf1Q8CFK2 Gm29298-201ENSMUST00000186704 696 ntBASIC8.28□□□□□ -1.08
Brf1Q8CFK2 Gm28185-201ENSMUST00000186815 694 ntBASIC8.28□□□□□ -1.08
Brf1Q8CFK2 Gm28227-201ENSMUST00000186862 696 ntBASIC8.28□□□□□ -1.08
Brf1Q8CFK2 Gm28796-201ENSMUST00000186905 696 ntBASIC8.28□□□□□ -1.08
Brf1Q8CFK2 Gm29659-201ENSMUST00000187063 696 ntBASIC8.28□□□□□ -1.08
Brf1Q8CFK2 Gm28473-201ENSMUST00000187325 696 ntBASIC8.28□□□□□ -1.08
Retrieved 100 of 76,532 protein–RNA pairs in 85.3 ms