Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 C78334-201ENSMUST00000186632 600 ntTSL 3 BASIC8.12□□□□□ -1.11
Nup88Q8CEC0 1700123O21Rik-201ENSMUST00000190515 677 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Nup88Q8CEC0 Gm25617-202ENSMUST00000198387 132 ntBASIC8.12□□□□□ -1.11
Nup88Q8CEC0 Gm42752-201ENSMUST00000198394 1106 ntBASIC8.12□□□□□ -1.11
Nup88Q8CEC0 Rps4x-ps-201ENSMUST00000199852 793 ntBASIC8.12□□□□□ -1.11
Nup88Q8CEC0 Gm44856-201ENSMUST00000206639 304 ntBASIC8.12□□□□□ -1.11
Nup88Q8CEC0 Gm39271-201ENSMUST00000212881 434 ntTSL 3 BASIC8.12□□□□□ -1.11
Nup88Q8CEC0 Gm29154-205ENSMUST00000213325 1112 ntTSL 5 BASIC8.12□□□□□ -1.11
Nup88Q8CEC0 Gm35274-201ENSMUST00000217709 646 ntTSL 5 BASIC8.12□□□□□ -1.11
Nup88Q8CEC0 Gm19238-201ENSMUST00000221936 1260 ntBASIC8.12□□□□□ -1.11
Nup88Q8CEC0 Cst8-201ENSMUST00000028931 768 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Nup88Q8CEC0 Olfr195-201ENSMUST00000075381 995 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
Nup88Q8CEC0 Olfr1265-201ENSMUST00000080311 930 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
Nup88Q8CEC0 Vpreb3-201ENSMUST00000000926 625 ntAPPRIS P2 TSL 1 (best) BASIC8.12□□□□□ -1.11
Nup88Q8CEC0 Sult2a3-201ENSMUST00000098809 1018 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
Nup88Q8CEC0 Olfr1269-201ENSMUST00000099756 1018 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
Nup88Q8CEC0 Lonrf2-201ENSMUST00000039612 5077 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Nup88Q8CEC0 Trps1-201ENSMUST00000077935 4436 ntAPPRIS P3 TSL 1 (best) BASIC8.12□□□□□ -1.11
Nup88Q8CEC0 Gm20121-201ENSMUST00000198547 1594 ntBASIC8.12□□□□□ -1.11
Nup88Q8CEC0 Gm33968-201ENSMUST00000211015 1562 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Nup88Q8CEC0 Fmr1-203ENSMUST00000114654 4061 ntAPPRIS ALT1 TSL 5 BASIC8.12□□□□□ -1.11
Nup88Q8CEC0 Zc3h11a-204ENSMUST00000191896 4396 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Nup88Q8CEC0 BC080695-201ENSMUST00000105765 2102 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Nup88Q8CEC0 Trps1-204ENSMUST00000183757 6202 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
Nup88Q8CEC0 Vmn1r44-206ENSMUST00000226760 2070 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
Nup88Q8CEC0 Cd44-201ENSMUST00000005218 5614 ntAPPRIS P4 TSL 1 (best) BASIC8.12□□□□□ -1.11
Nup88Q8CEC0 Atf7-211ENSMUST00000184906 1457 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Nup88Q8CEC0 Fbxw19-201ENSMUST00000076617 1483 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Nup88Q8CEC0 Birc6-223ENSMUST00000183224 14562 ntAPPRIS ALT2 TSL 5 BASIC8.12□□□□□ -1.11
Nup88Q8CEC0 Tgfbr1-203ENSMUST00000107725 1713 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Nup88Q8CEC0 Gm37525-201ENSMUST00000193499 2871 ntBASIC8.12□□□□□ -1.11
Nup88Q8CEC0 Olfr1085-202ENSMUST00000213279 5191 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
Nup88Q8CEC0 4930502E18Rik-201ENSMUST00000069209 1427 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Nup88Q8CEC0 AC129085.2-201ENSMUST00000223763 2800 ntBASIC8.11□□□□□ -1.11
Nup88Q8CEC0 Eya4-202ENSMUST00000092665 5304 ntAPPRIS P2 TSL 1 (best) BASIC8.11□□□□□ -1.11
Nup88Q8CEC0 Gm45174-201ENSMUST00000208884 3065 ntBASIC8.11□□□□□ -1.11
Nup88Q8CEC0 Stra6l-201ENSMUST00000030011 3606 ntAPPRIS P3 TSL 1 (best) BASIC8.11□□□□□ -1.11
Nup88Q8CEC0 Chl1-206ENSMUST00000205098 2464 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Nup88Q8CEC0 Mbnl3-204ENSMUST00000136404 1632 ntAPPRIS ALT2 TSL 5 BASIC8.11□□□□□ -1.11
Nup88Q8CEC0 Slc22a6-201ENSMUST00000010250 4026 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Nup88Q8CEC0 Lmbrd1-201ENSMUST00000095062 5228 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Nup88Q8CEC0 Sema6a-202ENSMUST00000076043 4123 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Nup88Q8CEC0 Gm36933-201ENSMUST00000194945 3071 ntBASIC8.11□□□□□ -1.11
Nup88Q8CEC0 Igkv1-122-201ENSMUST00000103314 383 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
Nup88Q8CEC0 Rps12-ps10-201ENSMUST00000117447 399 ntBASIC8.11□□□□□ -1.11
Nup88Q8CEC0 Gm14489-201ENSMUST00000120868 901 ntBASIC8.11□□□□□ -1.11
Nup88Q8CEC0 Gm8089-201ENSMUST00000122463 968 ntBASIC8.11□□□□□ -1.11
Nup88Q8CEC0 AU015336-201ENSMUST00000159040 849 ntTSL 5 BASIC8.11□□□□□ -1.11
Nup88Q8CEC0 Gml-202ENSMUST00000164026 895 ntAPPRIS P1 TSL 2 BASIC8.11□□□□□ -1.11
Nup88Q8CEC0 Vmn1r-ps78-201ENSMUST00000178185 924 ntBASIC8.11□□□□□ -1.11
Nup88Q8CEC0 Vmn1r-ps76-201ENSMUST00000179492 924 ntBASIC8.11□□□□□ -1.11
Nup88Q8CEC0 Gm21304-201ENSMUST00000180568 1185 ntAPPRIS P1 TSL 3 BASIC8.11□□□□□ -1.11
Nup88Q8CEC0 Gm21293-202ENSMUST00000180664 1185 ntAPPRIS P1 TSL 3 BASIC8.11□□□□□ -1.11
Nup88Q8CEC0 Gm4340-202ENSMUST00000181036 1197 ntAPPRIS ALT2 TSL 3 BASIC8.11□□□□□ -1.11
Nup88Q8CEC0 Gm21312-203ENSMUST00000181239 1185 ntAPPRIS ALT2 TSL 3 BASIC8.11□□□□□ -1.11
Nup88Q8CEC0 Gm4340-203ENSMUST00000181615 1258 ntAPPRIS P5 TSL 2 BASIC8.11□□□□□ -1.11
Nup88Q8CEC0 Gm20765-203ENSMUST00000181707 1185 ntAPPRIS ALT2 TSL 3 BASIC8.11□□□□□ -1.11
Nup88Q8CEC0 Gm8192-201ENSMUST00000182196 958 ntBASIC8.11□□□□□ -1.11
Nup88Q8CEC0 Gm43595-201ENSMUST00000196464 1071 ntBASIC8.11□□□□□ -1.11
Nup88Q8CEC0 Gm43495-201ENSMUST00000200060 205 ntTSL 5 BASIC8.11□□□□□ -1.11
Nup88Q8CEC0 Gm43926-201ENSMUST00000203978 430 ntBASIC8.11□□□□□ -1.11
Nup88Q8CEC0 Gm46424-201ENSMUST00000221567 168 ntBASIC8.11□□□□□ -1.11
Nup88Q8CEC0 Gm34552-201ENSMUST00000223381 636 ntTSL 5 BASIC8.11□□□□□ -1.11
Nup88Q8CEC0 CT030238.3-201ENSMUST00000227352 875 ntBASIC8.11□□□□□ -1.11
Nup88Q8CEC0 Sbpl-201ENSMUST00000024939 870 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Nup88Q8CEC0 Tcl1b2-201ENSMUST00000081379 1009 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Nup88Q8CEC0 Gm23734-201ENSMUST00000083753 109 ntBASIC8.11□□□□□ -1.11
Nup88Q8CEC0 Pik3c2g-215ENSMUST00000218528 2712 ntTSL 5 BASIC8.11□□□□□ -1.11
Nup88Q8CEC0 Gm14935-201ENSMUST00000121528 1708 ntBASIC8.11□□□□□ -1.11
Nup88Q8CEC0 C130075A20Rik-201ENSMUST00000198178 4176 ntBASIC8.11□□□□□ -1.11
Nup88Q8CEC0 Dcx-201ENSMUST00000033642 9074 ntAPPRIS ALT1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Nup88Q8CEC0 Gm43549-201ENSMUST00000198856 2661 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Nup88Q8CEC0 Gm45290-201ENSMUST00000211177 3890 ntBASIC8.11□□□□□ -1.11
Nup88Q8CEC0 Olfr76-202ENSMUST00000213471 3109 ntTSL 5 BASIC8.11□□□□□ -1.11
Nup88Q8CEC0 Gm4806-201ENSMUST00000222704 1690 ntBASIC8.11□□□□□ -1.11
Nup88Q8CEC0 Cmah-208ENSMUST00000224819 9482 ntBASIC8.11□□□□□ -1.11
Nup88Q8CEC0 Kirrel3os-201ENSMUST00000066604 3799 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Nup88Q8CEC0 Adam28-202ENSMUST00000111072 3025 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
Nup88Q8CEC0 Tshr-204ENSMUST00000221216 1638 ntTSL 5 BASIC8.11□□□□□ -1.11
Nup88Q8CEC0 Anks4b-201ENSMUST00000033201 3900 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Nup88Q8CEC0 Skiv2l2-201ENSMUST00000022281 3689 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Nup88Q8CEC0 Fhl4-201ENSMUST00000059383 3402 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Nup88Q8CEC0 Trim43b-202ENSMUST00000189557 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
Nup88Q8CEC0 Gm8113-201ENSMUST00000160298 2721 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Nup88Q8CEC0 Plch1-206ENSMUST00000159676 6560 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
Nup88Q8CEC0 CT030185.2-201ENSMUST00000222614 1310 ntBASIC8.1□□□□□ -1.11
Nup88Q8CEC0 Gm25311-201ENSMUST00000104136 132 ntBASIC8.1□□□□□ -1.11
Nup88Q8CEC0 Gm9439-201ENSMUST00000119554 973 ntBASIC8.1□□□□□ -1.11
Nup88Q8CEC0 Gm6142-201ENSMUST00000120290 325 ntBASIC8.1□□□□□ -1.11
Nup88Q8CEC0 Rpl15-ps1-201ENSMUST00000120694 564 ntBASIC8.1□□□□□ -1.11
Nup88Q8CEC0 Gm14353-201ENSMUST00000122200 869 ntBASIC8.1□□□□□ -1.11
Nup88Q8CEC0 Gm12929-201ENSMUST00000122406 370 ntBASIC8.1□□□□□ -1.11
Nup88Q8CEC0 Gm12600-201ENSMUST00000146704 708 ntTSL 3 BASIC8.1□□□□□ -1.11
Nup88Q8CEC0 1700086P04Rik-201ENSMUST00000149472 1009 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Nup88Q8CEC0 Gm17022-201ENSMUST00000166415 922 ntBASIC8.1□□□□□ -1.11
Nup88Q8CEC0 Trat1-201ENSMUST00000170861 684 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Nup88Q8CEC0 Cyp2c53-ps-201ENSMUST00000175649 897 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Nup88Q8CEC0 Trav21-dv12-201ENSMUST00000180938 360 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
Nup88Q8CEC0 1700041M19Rik-202ENSMUST00000190908 1123 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Nup88Q8CEC0 Gm43546-201ENSMUST00000196721 943 ntBASIC8.1□□□□□ -1.11
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms