Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 Defa24-201ENSMUST00000080533 419 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Ccdc38Q8CDN8 Gm25852-201ENSMUST00000082790 130 ntBASIC7.74□□□□□ -1.17
Ccdc38Q8CDN8 Gm10247-201ENSMUST00000090395 333 ntBASIC7.74□□□□□ -1.17
Ccdc38Q8CDN8 Dennd2c-202ENSMUST00000172288 4979 ntAPPRIS P2 TSL 1 (best) BASIC7.74□□□□□ -1.17
Ccdc38Q8CDN8 AC117608.1-201ENSMUST00000225500 3418 ntBASIC7.74□□□□□ -1.17
Ccdc38Q8CDN8 Olfr1362-201ENSMUST00000051874 3045 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
Ccdc38Q8CDN8 Dnah10-203ENSMUST00000141137 13862 ntAPPRIS ALT2 TSL 5 BASIC7.74□□□□□ -1.17
Ccdc38Q8CDN8 Rsf1os2-202ENSMUST00000147690 3091 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Ccdc38Q8CDN8 Hormad2-203ENSMUST00000109949 1343 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Ccdc38Q8CDN8 Nr1h5-202ENSMUST00000196135 1344 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Ccdc38Q8CDN8 Gm18409-201ENSMUST00000218988 2506 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Ccdc38Q8CDN8 Ccar1-211ENSMUST00000219527 3862 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Ccdc38Q8CDN8 Tulp4-201ENSMUST00000039655 9687 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Ccdc38Q8CDN8 Gm30075-201ENSMUST00000205509 3005 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Ccdc38Q8CDN8 Sp100-212ENSMUST00000153574 1653 ntTSL 5 BASIC7.73□□□□□ -1.17
Ccdc38Q8CDN8 Tbcel-202ENSMUST00000066179 3893 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Ccdc38Q8CDN8 Mgam2-ps-201ENSMUST00000195870 3745 ntBASIC7.73□□□□□ -1.17
Ccdc38Q8CDN8 Fktn-203ENSMUST00000128667 6080 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Ccdc38Q8CDN8 Gk-206ENSMUST00000142152 4229 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Ccdc38Q8CDN8 Gm42885-201ENSMUST00000200763 4214 ntBASIC7.73□□□□□ -1.17
Ccdc38Q8CDN8 BC003331-201ENSMUST00000006167 1716 ntAPPRIS ALT2 TSL 5 BASIC7.73□□□□□ -1.17
Ccdc38Q8CDN8 Igkv12-38-201ENSMUST00000103371 344 ntAPPRIS ALT2 BASIC7.73□□□□□ -1.17
Ccdc38Q8CDN8 Kat6b-203ENSMUST00000112458 997 ntTSL 5 BASIC7.73□□□□□ -1.17
Ccdc38Q8CDN8 Gm13196-201ENSMUST00000118297 379 ntBASIC7.73□□□□□ -1.17
Ccdc38Q8CDN8 Gm14465-201ENSMUST00000120603 567 ntBASIC7.73□□□□□ -1.17
Ccdc38Q8CDN8 Gm12459-201ENSMUST00000120659 356 ntBASIC7.73□□□□□ -1.17
Ccdc38Q8CDN8 Gm15786-201ENSMUST00000121079 450 ntBASIC7.73□□□□□ -1.17
Ccdc38Q8CDN8 Gm14796-201ENSMUST00000121216 959 ntBASIC7.73□□□□□ -1.17
Ccdc38Q8CDN8 Gm12297-201ENSMUST00000121380 979 ntBASIC7.73□□□□□ -1.17
Ccdc38Q8CDN8 Gm15538-201ENSMUST00000121410 313 ntBASIC7.73□□□□□ -1.17
Ccdc38Q8CDN8 Gm12181-201ENSMUST00000121448 531 ntBASIC7.73□□□□□ -1.17
Ccdc38Q8CDN8 Gm15217-202ENSMUST00000141358 347 ntAPPRIS ALT2 TSL 5 BASIC7.73□□□□□ -1.17
Ccdc38Q8CDN8 Gm17047-201ENSMUST00000167709 430 ntBASIC7.73□□□□□ -1.17
Ccdc38Q8CDN8 Obox3-ps3-201ENSMUST00000177242 1004 ntBASIC7.73□□□□□ -1.17
Ccdc38Q8CDN8 n-R5s93-201ENSMUST00000180091 119 ntBASIC7.73□□□□□ -1.17
Ccdc38Q8CDN8 Gm28894-201ENSMUST00000185214 615 ntBASIC7.73□□□□□ -1.17
Ccdc38Q8CDN8 Gm36991-201ENSMUST00000191800 648 ntBASIC7.73□□□□□ -1.17
Ccdc38Q8CDN8 Gm37369-201ENSMUST00000194179 615 ntBASIC7.73□□□□□ -1.17
Ccdc38Q8CDN8 Gm1647-201ENSMUST00000195406 735 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Ccdc38Q8CDN8 Gm9710-201ENSMUST00000198053 499 ntBASIC7.73□□□□□ -1.17
Ccdc38Q8CDN8 Gm3511-201ENSMUST00000199823 204 ntBASIC7.73□□□□□ -1.17
Ccdc38Q8CDN8 Gm43495-201ENSMUST00000200060 205 ntTSL 5 BASIC7.73□□□□□ -1.17
Ccdc38Q8CDN8 Mrln-201ENSMUST00000020090 443 ntAPPRIS P1 TSL 2 BASIC7.73□□□□□ -1.17
Ccdc38Q8CDN8 A730082K24Rik-202ENSMUST00000205795 658 ntTSL 3 BASIC7.73□□□□□ -1.17
Ccdc38Q8CDN8 Gm44931-201ENSMUST00000206056 545 ntBASIC7.73□□□□□ -1.17
Ccdc38Q8CDN8 Gm44692-201ENSMUST00000207441 901 ntTSL 3 BASIC7.73□□□□□ -1.17
Ccdc38Q8CDN8 4933402C06Rik-203ENSMUST00000207559 1227 ntTSL 5 BASIC7.73□□□□□ -1.17
Ccdc38Q8CDN8 Tpt1-ps4-201ENSMUST00000210908 503 ntBASIC7.73□□□□□ -1.17
Ccdc38Q8CDN8 Tmem213-201ENSMUST00000031851 631 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Ccdc38Q8CDN8 Olfr1265-201ENSMUST00000080311 930 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
Ccdc38Q8CDN8 Olfr1269-201ENSMUST00000099756 1018 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
Ccdc38Q8CDN8 Amer1-201ENSMUST00000084535 8496 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Ccdc38Q8CDN8 Phospho2-206ENSMUST00000180290 3267 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Ccdc38Q8CDN8 Tnfsf10-201ENSMUST00000046383 4993 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Ccdc38Q8CDN8 Nlrp3-202ENSMUST00000101148 4021 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Ccdc38Q8CDN8 Cd200r4-202ENSMUST00000176321 2005 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Ccdc38Q8CDN8 Gm20043-201ENSMUST00000222267 2565 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Ccdc38Q8CDN8 Cyp4a10-202ENSMUST00000094886 2052 ntAPPRIS ALT2 TSL 2 BASIC7.72□□□□□ -1.17
Ccdc38Q8CDN8 Olfr342-202ENSMUST00000216275 3818 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
Ccdc38Q8CDN8 Slc4a4-203ENSMUST00000130041 3335 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Ccdc38Q8CDN8 Gm18066-201ENSMUST00000210904 1774 ntBASIC7.72□□□□□ -1.17
Ccdc38Q8CDN8 Lingo2-203ENSMUST00000108122 3362 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Ccdc38Q8CDN8 Gm45360-201ENSMUST00000210698 1405 ntBASIC7.72□□□□□ -1.17
Ccdc38Q8CDN8 Vcam1-203ENSMUST00000196449 2532 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Ccdc38Q8CDN8 Gm14324-201ENSMUST00000121358 3051 ntBASIC7.72□□□□□ -1.17
Ccdc38Q8CDN8 Zfp27-204ENSMUST00000161904 3090 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Ccdc38Q8CDN8 Zdhhc17-201ENSMUST00000041723 4548 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Ccdc38Q8CDN8 AC158938.1-201ENSMUST00000225372 6720 ntBASIC7.72□□□□□ -1.17
Ccdc38Q8CDN8 Gm23485-201ENSMUST00000104181 155 ntBASIC7.72□□□□□ -1.17
Ccdc38Q8CDN8 Gm13930-201ENSMUST00000118569 368 ntBASIC7.72□□□□□ -1.17
Ccdc38Q8CDN8 Gm8421-201ENSMUST00000119439 305 ntBASIC7.72□□□□□ -1.17
Ccdc38Q8CDN8 Gm15473-201ENSMUST00000140746 1179 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Ccdc38Q8CDN8 Gm14319-201ENSMUST00000142937 703 ntTSL 2 BASIC7.72□□□□□ -1.17
Ccdc38Q8CDN8 2410003L11Rik-202ENSMUST00000145262 642 ntTSL 3 BASIC7.72□□□□□ -1.17
Ccdc38Q8CDN8 Gm14241-201ENSMUST00000151260 264 ntTSL 5 BASIC7.72□□□□□ -1.17
Ccdc38Q8CDN8 Gm17032-201ENSMUST00000164367 338 ntTSL 3 BASIC7.72□□□□□ -1.17
Ccdc38Q8CDN8 1700003I22Rik-201ENSMUST00000186048 424 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Ccdc38Q8CDN8 Gm37966-201ENSMUST00000193122 326 ntBASIC7.72□□□□□ -1.17
Ccdc38Q8CDN8 Gm32585-201ENSMUST00000198586 764 ntTSL 3 BASIC7.72□□□□□ -1.17
Ccdc38Q8CDN8 Gm42573-201ENSMUST00000202327 478 ntBASIC7.72□□□□□ -1.17
Ccdc38Q8CDN8 Gm39090-201ENSMUST00000205284 972 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Ccdc38Q8CDN8 Gm45070-201ENSMUST00000208100 246 ntBASIC7.72□□□□□ -1.17
Ccdc38Q8CDN8 Gm45666-201ENSMUST00000211474 277 ntTSL 5 BASIC7.72□□□□□ -1.17
Ccdc38Q8CDN8 Gm18655-201ENSMUST00000214802 1090 ntBASIC7.72□□□□□ -1.17
Ccdc38Q8CDN8 Gm34215-201ENSMUST00000221599 355 ntTSL 5 BASIC7.72□□□□□ -1.17
Ccdc38Q8CDN8 AC160114.3-201ENSMUST00000222256 560 ntTSL 5 BASIC7.72□□□□□ -1.17
Ccdc38Q8CDN8 AC121542.2-201ENSMUST00000227529 400 ntBASIC7.72□□□□□ -1.17
Ccdc38Q8CDN8 Zfp626-201ENSMUST00000080175 816 ntTSL 5 BASIC7.72□□□□□ -1.17
Ccdc38Q8CDN8 Vaultrc5-201ENSMUST00000083211 143 ntBASIC7.72□□□□□ -1.17
Ccdc38Q8CDN8 Tex47-201ENSMUST00000088796 1085 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Ccdc38Q8CDN8 Vmn1r201-202ENSMUST00000226330 4770 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
Ccdc38Q8CDN8 Gramd1c-204ENSMUST00000214098 2046 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
Ccdc38Q8CDN8 Rap2c-201ENSMUST00000053593 3545 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Ccdc38Q8CDN8 Tcf7l2-213ENSMUST00000111662 3715 ntAPPRIS ALT2 TSL 5 BASIC7.72□□□□□ -1.17
Ccdc38Q8CDN8 Gm19024-201ENSMUST00000194681 1319 ntBASIC7.72□□□□□ -1.17
Ccdc38Q8CDN8 Prelp-201ENSMUST00000048432 3615 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Ccdc38Q8CDN8 Gm10826-201ENSMUST00000215366 3304 ntBASIC7.72□□□□□ -1.17
Ccdc38Q8CDN8 Gm39139-202ENSMUST00000212621 5878 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Ccdc38Q8CDN8 Cep55-201ENSMUST00000096096 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC7.71□□□□□ -1.17
Ccdc38Q8CDN8 Prcp-201ENSMUST00000076052 2967 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
Retrieved 100 of 76,532 protein–RNA pairs in 81.3 ms