Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Smad2-201ENSMUST00000025453 2410 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
Col6a6Q8C6K9 Gm14251-201ENSMUST00000122133 279 ntBASIC6.23□□□□□ -1.41
Col6a6Q8C6K9 Gm12596-201ENSMUST00000124589 673 ntTSL 3 BASIC6.23□□□□□ -1.41
Col6a6Q8C6K9 Gm12860-201ENSMUST00000148457 957 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Col6a6Q8C6K9 Gm24176-201ENSMUST00000158928 121 ntBASIC6.23□□□□□ -1.41
Col6a6Q8C6K9 Gm4613-201ENSMUST00000165488 276 ntBASIC6.23□□□□□ -1.41
Col6a6Q8C6K9 Serpina3e-ps-201ENSMUST00000165968 1228 ntBASIC6.23□□□□□ -1.41
Col6a6Q8C6K9 Gm15257-201ENSMUST00000177680 883 ntBASIC6.23□□□□□ -1.41
Col6a6Q8C6K9 Gm15252-201ENSMUST00000177750 883 ntBASIC6.23□□□□□ -1.41
Col6a6Q8C6K9 Gm15256-201ENSMUST00000177793 883 ntBASIC6.23□□□□□ -1.41
Col6a6Q8C6K9 Gm15260-201ENSMUST00000179402 883 ntBASIC6.23□□□□□ -1.41
Col6a6Q8C6K9 D630011A20Rik-201ENSMUST00000180858 500 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Col6a6Q8C6K9 Gm27010-201ENSMUST00000182727 863 ntTSL 3 BASIC6.23□□□□□ -1.41
Col6a6Q8C6K9 AC105324.1-201ENSMUST00000227844 386 ntBASIC6.23□□□□□ -1.41
Col6a6Q8C6K9 Txk-201ENSMUST00000113604 2260 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
Col6a6Q8C6K9 Kel-201ENSMUST00000031899 2530 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Col6a6Q8C6K9 Soat1-207ENSMUST00000189661 8371 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Col6a6Q8C6K9 Tbc1d23-203ENSMUST00000226586 3112 ntBASIC6.23□□□□□ -1.41
Col6a6Q8C6K9 Gm14085-201ENSMUST00000110521 3740 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Col6a6Q8C6K9 Farsb-201ENSMUST00000068333 1951 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Col6a6Q8C6K9 Abca17-202ENSMUST00000121226 5317 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Col6a6Q8C6K9 Csde1-201ENSMUST00000029446 4318 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
Col6a6Q8C6K9 Gm6493-201ENSMUST00000159889 1786 ntBASIC6.23□□□□□ -1.41
Col6a6Q8C6K9 Ofcc1-201ENSMUST00000054635 2816 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Col6a6Q8C6K9 4931406B18Rik-208ENSMUST00000191516 2566 ntAPPRIS P2 TSL 1 (best) BASIC6.23□□□□□ -1.41
Col6a6Q8C6K9 Gm340-201ENSMUST00000172371 3729 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Col6a6Q8C6K9 Slc17a4-201ENSMUST00000021769 1604 ntAPPRIS P2 TSL 5 BASIC6.23□□□□□ -1.41
Col6a6Q8C6K9 Trbv4-201ENSMUST00000103265 393 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Col6a6Q8C6K9 Gm14295-201ENSMUST00000118012 1213 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Col6a6Q8C6K9 Rps29-ps-201ENSMUST00000122083 172 ntBASIC6.23□□□□□ -1.41
Col6a6Q8C6K9 Gm11335-201ENSMUST00000148743 1080 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Col6a6Q8C6K9 Gm16161-201ENSMUST00000162239 290 ntTSL 2 BASIC6.23□□□□□ -1.41
Col6a6Q8C6K9 Gm27030-201ENSMUST00000182551 464 ntBASIC6.23□□□□□ -1.41
Col6a6Q8C6K9 Gm28358-201ENSMUST00000187860 636 ntTSL 5 BASIC6.23□□□□□ -1.41
Col6a6Q8C6K9 Lemd1-209ENSMUST00000191418 726 ntAPPRIS ALT2 TSL 2 BASIC6.23□□□□□ -1.41
Col6a6Q8C6K9 Gm43392-201ENSMUST00000196560 434 ntBASIC6.23□□□□□ -1.41
Col6a6Q8C6K9 Gm45432-201ENSMUST00000210391 416 ntBASIC6.23□□□□□ -1.41
Col6a6Q8C6K9 Gm2788-207ENSMUST00000211055 1078 ntTSL 5 BASIC6.23□□□□□ -1.41
Col6a6Q8C6K9 Gm6145-205ENSMUST00000211114 1148 ntTSL 5 BASIC6.23□□□□□ -1.41
Col6a6Q8C6K9 CT868720.2-201ENSMUST00000221207 413 ntTSL 3 BASIC6.23□□□□□ -1.41
Col6a6Q8C6K9 AC154573.2-201ENSMUST00000224174 378 ntBASIC6.23□□□□□ -1.41
Col6a6Q8C6K9 AC107663.1-201ENSMUST00000224257 468 ntBASIC6.23□□□□□ -1.41
Col6a6Q8C6K9 Ccr1l1-201ENSMUST00000071404 1166 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Col6a6Q8C6K9 Gm45407-201ENSMUST00000209499 3676 ntBASIC6.23□□□□□ -1.41
Col6a6Q8C6K9 Gm8728-201ENSMUST00000207367 2178 ntBASIC6.23□□□□□ -1.41
Col6a6Q8C6K9 Gm8486-201ENSMUST00000207508 2171 ntBASIC6.23□□□□□ -1.41
Col6a6Q8C6K9 Gm8685-201ENSMUST00000207567 2183 ntBASIC6.23□□□□□ -1.41
Col6a6Q8C6K9 Gm16443-201ENSMUST00000207909 2184 ntBASIC6.23□□□□□ -1.41
Col6a6Q8C6K9 Gm5177-202ENSMUST00000183337 3785 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Col6a6Q8C6K9 Gm3460-201ENSMUST00000167882 1809 ntAPPRIS P5 TSL 5 BASIC6.23□□□□□ -1.41
Col6a6Q8C6K9 Olfr525-202ENSMUST00000214594 5137 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Col6a6Q8C6K9 Mep1b-201ENSMUST00000082235 2286 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Col6a6Q8C6K9 Gm3892-202ENSMUST00000178043 3539 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Col6a6Q8C6K9 Gm10593-201ENSMUST00000178906 3539 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Col6a6Q8C6K9 Depdc5-204ENSMUST00000119705 7929 ntAPPRIS P2 TSL 1 (best) BASIC6.23□□□□□ -1.41
Col6a6Q8C6K9 Gm6614-202ENSMUST00000181628 2364 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
Col6a6Q8C6K9 Amer1-201ENSMUST00000084535 8496 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Col6a6Q8C6K9 Amy2b-201ENSMUST00000120184 1577 ntBASIC6.22□□□□□ -1.41
Col6a6Q8C6K9 Gm17751-201ENSMUST00000189132 2004 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Col6a6Q8C6K9 Hrnr-201ENSMUST00000090856 10656 ntAPPRIS P2 TSL 5 BASIC6.22□□□□□ -1.41
Col6a6Q8C6K9 Gm43534-201ENSMUST00000197685 2853 ntBASIC6.22□□□□□ -1.41
Col6a6Q8C6K9 Gm9839-201ENSMUST00000195252 1437 ntBASIC6.22□□□□□ -1.41
Col6a6Q8C6K9 Phlpp2-201ENSMUST00000034175 7839 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Col6a6Q8C6K9 Plscr2-202ENSMUST00000113044 1239 ntTSL 3 BASIC6.22□□□□□ -1.41
Col6a6Q8C6K9 Gm14580-201ENSMUST00000119122 718 ntBASIC6.22□□□□□ -1.41
Col6a6Q8C6K9 Gm14712-201ENSMUST00000120195 772 ntBASIC6.22□□□□□ -1.41
Col6a6Q8C6K9 Gm12402-201ENSMUST00000120536 334 ntBASIC6.22□□□□□ -1.41
Col6a6Q8C6K9 Vmn1r-ps111-201ENSMUST00000121014 997 ntBASIC6.22□□□□□ -1.41
Col6a6Q8C6K9 D830026I12Rik-201ENSMUST00000124434 935 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Col6a6Q8C6K9 Vmn1r208-201ENSMUST00000124841 927 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
Col6a6Q8C6K9 Gm2709-201ENSMUST00000142979 350 ntBASIC6.22□□□□□ -1.41
Col6a6Q8C6K9 C230035I16Rik-202ENSMUST00000153753 643 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Col6a6Q8C6K9 Gm18700-201ENSMUST00000185791 553 ntBASIC6.22□□□□□ -1.41
Col6a6Q8C6K9 AC147782.1-201ENSMUST00000219169 475 ntBASIC6.22□□□□□ -1.41
Col6a6Q8C6K9 Gm17849-201ENSMUST00000219788 853 ntBASIC6.22□□□□□ -1.41
Col6a6Q8C6K9 Tceal8-201ENSMUST00000060101 1250 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Col6a6Q8C6K9 Gm38277-201ENSMUST00000195172 1367 ntBASIC6.22□□□□□ -1.41
Col6a6Q8C6K9 Gm3510-201ENSMUST00000180447 1455 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Col6a6Q8C6K9 Mapk10-205ENSMUST00000128869 2518 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Col6a6Q8C6K9 Tcp10c-201ENSMUST00000097403 2528 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Col6a6Q8C6K9 Mettl21e-201ENSMUST00000054801 3211 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Col6a6Q8C6K9 Muc5b-201ENSMUST00000165147 14964 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Col6a6Q8C6K9 Gm16630-201ENSMUST00000180741 3257 ntTSL 5 BASIC6.22□□□□□ -1.41
Col6a6Q8C6K9 Akr1c19-202ENSMUST00000118663 5832 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Col6a6Q8C6K9 Usp8-202ENSMUST00000110416 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
Col6a6Q8C6K9 Otub2-205ENSMUST00000179684 2890 ntTSL 5 BASIC6.22□□□□□ -1.41
Col6a6Q8C6K9 Lyve1-201ENSMUST00000033050 2893 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Col6a6Q8C6K9 Gm37706-201ENSMUST00000195379 2765 ntBASIC6.22□□□□□ -1.41
Col6a6Q8C6K9 Gm16344-201ENSMUST00000150084 1567 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Col6a6Q8C6K9 Slc6a19-201ENSMUST00000022048 3936 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Col6a6Q8C6K9 Gm12710-201ENSMUST00000119011 216 ntBASIC6.22□□□□□ -1.41
Col6a6Q8C6K9 Gm6451-201ENSMUST00000121488 717 ntBASIC6.22□□□□□ -1.41
Col6a6Q8C6K9 Gm13237-201ENSMUST00000122151 635 ntBASIC6.22□□□□□ -1.41
Col6a6Q8C6K9 Gm38254-201ENSMUST00000192276 1009 ntBASIC6.22□□□□□ -1.41
Col6a6Q8C6K9 Cfhr2-202ENSMUST00000194186 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
Col6a6Q8C6K9 Gm44471-201ENSMUST00000197963 100 ntBASIC6.22□□□□□ -1.41
Col6a6Q8C6K9 Gm39090-202ENSMUST00000205992 508 ntTSL 5 BASIC6.22□□□□□ -1.41
Col6a6Q8C6K9 AC163684.1-201ENSMUST00000223766 927 ntBASIC6.22□□□□□ -1.41
Col6a6Q8C6K9 Olfr735-201ENSMUST00000049729 1065 ntAPPRIS P2 BASIC6.22□□□□□ -1.41
Col6a6Q8C6K9 March1-201ENSMUST00000039540 2733 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 91.2 ms