Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Gm27866-201ENSMUST00000184459 171 ntBASIC8.69□□□□□ -1.02
Trim47Q8C0E3 Gm29273-201ENSMUST00000188880 262 ntBASIC8.69□□□□□ -1.02
Trim47Q8C0E3 Gm28294-201ENSMUST00000191154 386 ntTSL 2 BASIC8.69□□□□□ -1.02
Trim47Q8C0E3 Gm31406-201ENSMUST00000192297 671 ntTSL 2 BASIC8.69□□□□□ -1.02
Trim47Q8C0E3 Gm38078-201ENSMUST00000192771 392 ntBASIC8.69□□□□□ -1.02
Trim47Q8C0E3 Gimd1-202ENSMUST00000196701 654 ntAPPRIS P1 TSL 3 BASIC8.69□□□□□ -1.02
Trim47Q8C0E3 Gm43698-202ENSMUST00000202864 555 ntTSL 3 BASIC8.69□□□□□ -1.02
Trim47Q8C0E3 Olfr1348-204ENSMUST00000208066 1135 ntAPPRIS P1 BASIC8.69□□□□□ -1.02
Trim47Q8C0E3 AC154296.3-201ENSMUST00000214427 712 ntBASIC8.69□□□□□ -1.02
Trim47Q8C0E3 Gm32443-201ENSMUST00000217880 707 ntTSL 3 BASIC8.69□□□□□ -1.02
Trim47Q8C0E3 5033421B08Rik-202ENSMUST00000219595 1194 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Trim47Q8C0E3 AC163296.1-201ENSMUST00000220004 1266 ntBASIC8.69□□□□□ -1.02
Trim47Q8C0E3 AC129537.1-201ENSMUST00000226596 1228 ntBASIC8.69□□□□□ -1.02
Trim47Q8C0E3 Defb3-201ENSMUST00000033852 275 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Trim47Q8C0E3 BC048671-201ENSMUST00000054799 1212 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Trim47Q8C0E3 Klrk1-202ENSMUST00000095412 1019 ntAPPRIS ALT2 TSL 1 (best) BASIC8.69□□□□□ -1.02
Trim47Q8C0E3 Gm10665-201ENSMUST00000098720 966 ntAPPRIS P1 BASIC8.69□□□□□ -1.02
Trim47Q8C0E3 Gm10670-201ENSMUST00000098744 966 ntAPPRIS P1 BASIC8.69□□□□□ -1.02
Trim47Q8C0E3 Wdr72-201ENSMUST00000055879 5196 ntAPPRIS P2 TSL 1 (best) BASIC8.69□□□□□ -1.02
Trim47Q8C0E3 Gm45194-202ENSMUST00000207962 1991 ntAPPRIS P5 TSL 5 BASIC8.69□□□□□ -1.02
Trim47Q8C0E3 Psmd10-202ENSMUST00000112978 1390 ntAPPRIS ALT1 TSL 2 BASIC8.69□□□□□ -1.02
Trim47Q8C0E3 4930402F11Rik-204ENSMUST00000208612 1405 ntTSL 5 BASIC8.69□□□□□ -1.02
Trim47Q8C0E3 Gm5535-208ENSMUST00000210482 1403 ntTSL 5 BASIC8.69□□□□□ -1.02
Trim47Q8C0E3 Gm28839-201ENSMUST00000189579 2171 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Trim47Q8C0E3 Gm7086-201ENSMUST00000219083 1482 ntTSL 5 BASIC8.69□□□□□ -1.02
Trim47Q8C0E3 2010310C07Rik-201ENSMUST00000187172 2226 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Trim47Q8C0E3 Hmcn2-201ENSMUST00000113532 15646 ntAPPRIS P1 TSL 5 BASIC8.69□□□□□ -1.02
Trim47Q8C0E3 Cks1brt-201ENSMUST00000076896 2301 ntAPPRIS P1 BASIC8.69□□□□□ -1.02
Trim47Q8C0E3 Lars2-201ENSMUST00000038863 3894 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Trim47Q8C0E3 Naip1-201ENSMUST00000022142 5464 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Trim47Q8C0E3 Ncoa6-202ENSMUST00000109669 2379 ntAPPRIS ALT2 TSL 1 (best) BASIC8.69□□□□□ -1.02
Trim47Q8C0E3 3110035E14Rik-201ENSMUST00000088666 3256 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Trim47Q8C0E3 Dnajb4-202ENSMUST00000050073 2464 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Trim47Q8C0E3 Sv2c-201ENSMUST00000161263 9101 ntAPPRIS P1 TSL 5 BASIC8.68□□□□□ -1.02
Trim47Q8C0E3 Gm884-202ENSMUST00000167262 4576 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Trim47Q8C0E3 Satb1-203ENSMUST00000129667 2896 ntAPPRIS P2 TSL 5 BASIC8.68□□□□□ -1.02
Trim47Q8C0E3 Adarb2-201ENSMUST00000064473 6721 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Trim47Q8C0E3 Smg7-201ENSMUST00000043560 5792 ntAPPRIS ALT2 TSL 1 (best) BASIC8.68□□□□□ -1.02
Trim47Q8C0E3 Dock9-201ENSMUST00000040700 7803 ntAPPRIS P3 TSL 2 BASIC8.68□□□□□ -1.02
Trim47Q8C0E3 Gm14226-201ENSMUST00000130870 3243 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Trim47Q8C0E3 Naip1-204ENSMUST00000222155 5361 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Trim47Q8C0E3 Vmn1r51-204ENSMUST00000226977 4357 ntAPPRIS P1 BASIC8.68□□□□□ -1.02
Trim47Q8C0E3 Gm43410-201ENSMUST00000197510 2234 ntBASIC8.68□□□□□ -1.02
Trim47Q8C0E3 Fbln5-201ENSMUST00000021603 5829 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Trim47Q8C0E3 Olfr825-203ENSMUST00000216530 3502 ntAPPRIS P1 TSL 5 BASIC8.68□□□□□ -1.02
Trim47Q8C0E3 Cdc40-201ENSMUST00000044166 3534 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Trim47Q8C0E3 Gm25167-201ENSMUST00000104188 120 ntBASIC8.68□□□□□ -1.02
Trim47Q8C0E3 Olfr1196-201ENSMUST00000104892 945 ntAPPRIS P1 BASIC8.68□□□□□ -1.02
Trim47Q8C0E3 Lrrc51-203ENSMUST00000106963 835 ntTSL 2 BASIC8.68□□□□□ -1.02
Trim47Q8C0E3 Gm11866-201ENSMUST00000120209 335 ntBASIC8.68□□□□□ -1.02
Trim47Q8C0E3 Gm14360-201ENSMUST00000120670 393 ntBASIC8.68□□□□□ -1.02
Trim47Q8C0E3 Gm12692-201ENSMUST00000121092 546 ntBASIC8.68□□□□□ -1.02
Trim47Q8C0E3 Gm10680-201ENSMUST00000156612 702 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Trim47Q8C0E3 Gm18709-201ENSMUST00000180564 489 ntBASIC8.68□□□□□ -1.02
Trim47Q8C0E3 Ets1-205ENSMUST00000184364 678 ntTSL 5 BASIC8.68□□□□□ -1.02
Trim47Q8C0E3 Gm27588-201ENSMUST00000185096 263 ntBASIC8.68□□□□□ -1.02
Trim47Q8C0E3 Txn-ps1-201ENSMUST00000186385 309 ntBASIC8.68□□□□□ -1.02
Trim47Q8C0E3 Gm8403-201ENSMUST00000189712 1298 ntBASIC8.68□□□□□ -1.02
Trim47Q8C0E3 Gm28239-201ENSMUST00000190225 447 ntBASIC8.68□□□□□ -1.02
Trim47Q8C0E3 Olfr1228-201ENSMUST00000190757 1094 ntAPPRIS P2 BASIC8.68□□□□□ -1.02
Trim47Q8C0E3 Gm37837-201ENSMUST00000191743 604 ntBASIC8.68□□□□□ -1.02
Trim47Q8C0E3 Gm37884-201ENSMUST00000191857 818 ntBASIC8.68□□□□□ -1.02
Trim47Q8C0E3 Gm43743-202ENSMUST00000198353 491 ntBASIC8.68□□□□□ -1.02
Trim47Q8C0E3 Gm7542-201ENSMUST00000201140 777 ntBASIC8.68□□□□□ -1.02
Trim47Q8C0E3 Gm6230-201ENSMUST00000208077 780 ntBASIC8.68□□□□□ -1.02
Trim47Q8C0E3 Gm45693-201ENSMUST00000211391 1157 ntBASIC8.68□□□□□ -1.02
Trim47Q8C0E3 Gm7151-201ENSMUST00000211511 954 ntBASIC8.68□□□□□ -1.02
Trim47Q8C0E3 AC124585.1-201ENSMUST00000213334 953 ntTSL 5 BASIC8.68□□□□□ -1.02
Trim47Q8C0E3 Olfr790-204ENSMUST00000218901 1070 ntBASIC8.68□□□□□ -1.02
Trim47Q8C0E3 AC161252.1-201ENSMUST00000225536 467 ntBASIC8.68□□□□□ -1.02
Trim47Q8C0E3 AC154390.1-201ENSMUST00000225629 277 ntBASIC8.68□□□□□ -1.02
Trim47Q8C0E3 CT009556.3-201ENSMUST00000226173 513 ntBASIC8.68□□□□□ -1.02
Trim47Q8C0E3 Olfr1052-201ENSMUST00000054746 940 ntAPPRIS P1 BASIC8.68□□□□□ -1.02
Trim47Q8C0E3 Olfr1008-201ENSMUST00000054868 942 ntAPPRIS P1 BASIC8.68□□□□□ -1.02
Trim47Q8C0E3 Olfr790-201ENSMUST00000056002 1070 ntAPPRIS P1 BASIC8.68□□□□□ -1.02
Trim47Q8C0E3 Olfr1197-201ENSMUST00000099815 945 ntAPPRIS P1 BASIC8.68□□□□□ -1.02
Trim47Q8C0E3 Gm37121-201ENSMUST00000192219 2556 ntBASIC8.68□□□□□ -1.02
Trim47Q8C0E3 AC162467.2-201ENSMUST00000219397 2571 ntBASIC8.68□□□□□ -1.02
Trim47Q8C0E3 Gm43062-201ENSMUST00000196302 1319 ntBASIC8.68□□□□□ -1.02
Trim47Q8C0E3 Lamb3-202ENSMUST00000159955 4013 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Trim47Q8C0E3 Hecw1-201ENSMUST00000110516 9460 ntAPPRIS P1 TSL 5 BASIC8.68□□□□□ -1.02
Trim47Q8C0E3 Zfp931-201ENSMUST00000108923 1372 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Trim47Q8C0E3 Lepr-201ENSMUST00000037552 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC8.68□□□□□ -1.02
Trim47Q8C0E3 Wdr27-206ENSMUST00000228330 2759 ntAPPRIS P1 BASIC8.68□□□□□ -1.02
Trim47Q8C0E3 Trappc2-202ENSMUST00000112194 1418 ntAPPRIS P1 TSL 5 BASIC8.68□□□□□ -1.02
Trim47Q8C0E3 Gm44684-201ENSMUST00000205388 2926 ntTSL 5 BASIC8.68□□□□□ -1.02
Trim47Q8C0E3 Vmn1r176-202ENSMUST00000226319 2930 ntAPPRIS P1 BASIC8.68□□□□□ -1.02
Trim47Q8C0E3 Vmn1r26-203ENSMUST00000228070 4419 ntAPPRIS P1 BASIC8.68□□□□□ -1.02
Trim47Q8C0E3 Rgs13-202ENSMUST00000111941 1545 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Trim47Q8C0E3 Cep162-201ENSMUST00000093802 7685 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Trim47Q8C0E3 Gpr50-201ENSMUST00000070449 3069 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Trim47Q8C0E3 Exoc1-202ENSMUST00000087133 3371 ntAPPRIS P4 TSL 1 (best) BASIC8.68□□□□□ -1.02
Trim47Q8C0E3 Gm10706-201ENSMUST00000128327 1960 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Trim47Q8C0E3 Gm38374-201ENSMUST00000194417 2033 ntBASIC8.68□□□□□ -1.02
Trim47Q8C0E3 Gm8204-201ENSMUST00000185696 2144 ntBASIC8.68□□□□□ -1.02
Trim47Q8C0E3 Trub1-201ENSMUST00000026072 4300 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Trim47Q8C0E3 Setd5-203ENSMUST00000113157 6527 ntTSL 5 BASIC8.68□□□□□ -1.02
Trim47Q8C0E3 Plag1-201ENSMUST00000003369 4774 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Trim47Q8C0E3 Gm43292-201ENSMUST00000199580 2449 ntBASIC8.68□□□□□ -1.02
Trim47Q8C0E3 Gm42648-201ENSMUST00000200774 2505 ntBASIC8.68□□□□□ -1.02
Retrieved 100 of 76,532 protein–RNA pairs in 60.5 ms