Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Gm16568-201ENSMUST00000066038 1910 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
Ccdc40Q8BI79 C920009B18Rik-202ENSMUST00000181223 4535 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
Ccdc40Q8BI79 Gramd1c-204ENSMUST00000214098 2046 ntAPPRIS P1 TSL 5 BASIC7.27□□□□□ -1.25
Ccdc40Q8BI79 Fam49a-202ENSMUST00000069066 9452 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
Ccdc40Q8BI79 Vmn2r9-201ENSMUST00000170419 2547 ntAPPRIS P1 TSL 5 BASIC7.27□□□□□ -1.25
Ccdc40Q8BI79 Ccdc175-201ENSMUST00000021494 2622 ntAPPRIS P1 TSL 5 BASIC7.27□□□□□ -1.25
Ccdc40Q8BI79 Celf2-206ENSMUST00000114934 5470 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
Ccdc40Q8BI79 Mbnl2-203ENSMUST00000226800 3328 ntBASIC7.27□□□□□ -1.25
Ccdc40Q8BI79 Gm23834-201ENSMUST00000104436 129 ntBASIC7.27□□□□□ -1.25
Ccdc40Q8BI79 Gm17170-201ENSMUST00000112785 316 ntBASIC7.27□□□□□ -1.25
Ccdc40Q8BI79 Gm13130-201ENSMUST00000119195 1166 ntBASIC7.27□□□□□ -1.25
Ccdc40Q8BI79 Gm6877-201ENSMUST00000119347 1101 ntBASIC7.27□□□□□ -1.25
Ccdc40Q8BI79 Gm15188-201ENSMUST00000121264 704 ntBASIC7.27□□□□□ -1.25
Ccdc40Q8BI79 Gm11496-201ENSMUST00000128078 581 ntTSL 2 BASIC7.27□□□□□ -1.25
Ccdc40Q8BI79 Gm27401-201ENSMUST00000184052 173 ntBASIC7.27□□□□□ -1.25
Ccdc40Q8BI79 Mir7115-201ENSMUST00000184275 64 ntBASIC7.27□□□□□ -1.25
Ccdc40Q8BI79 Pdc-204ENSMUST00000191228 1235 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
Ccdc40Q8BI79 Gm42558-201ENSMUST00000200982 265 ntBASIC7.27□□□□□ -1.25
Ccdc40Q8BI79 Gm44044-201ENSMUST00000205178 1089 ntBASIC7.27□□□□□ -1.25
Ccdc40Q8BI79 Gm44692-201ENSMUST00000207441 901 ntTSL 3 BASIC7.27□□□□□ -1.25
Ccdc40Q8BI79 Gm45764-201ENSMUST00000213047 571 ntTSL 5 BASIC7.27□□□□□ -1.25
Ccdc40Q8BI79 Olfr221-203ENSMUST00000214342 1062 ntAPPRIS P1 BASIC7.27□□□□□ -1.25
Ccdc40Q8BI79 Mplkip-202ENSMUST00000221480 582 ntTSL 5 BASIC7.27□□□□□ -1.25
Ccdc40Q8BI79 Gm36758-201ENSMUST00000222594 310 ntBASIC7.27□□□□□ -1.25
Ccdc40Q8BI79 AC134468.2-202ENSMUST00000222820 1120 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
Ccdc40Q8BI79 AC154324.1-201ENSMUST00000226711 814 ntBASIC7.27□□□□□ -1.25
Ccdc40Q8BI79 CT009556.4-201ENSMUST00000227092 200 ntBASIC7.27□□□□□ -1.25
Ccdc40Q8BI79 Gm16020-201ENSMUST00000084281 210 ntBASIC7.27□□□□□ -1.25
Ccdc40Q8BI79 Olfr220-201ENSMUST00000085861 978 ntAPPRIS P1 BASIC7.27□□□□□ -1.25
Ccdc40Q8BI79 Adgrg4-201ENSMUST00000096431 1137 ntTSL 2 BASIC7.27□□□□□ -1.25
Ccdc40Q8BI79 Olfr1305-201ENSMUST00000099608 939 ntAPPRIS P1 BASIC7.27□□□□□ -1.25
Ccdc40Q8BI79 Daw1-203ENSMUST00000113436 1351 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
Ccdc40Q8BI79 Asap1-206ENSMUST00000175799 4237 ntAPPRIS ALT2 TSL 5 BASIC7.27□□□□□ -1.25
Ccdc40Q8BI79 Gpr22-203ENSMUST00000176710 1772 ntAPPRIS P1 TSL 5 BASIC7.27□□□□□ -1.25
Ccdc40Q8BI79 Lpar6-201ENSMUST00000044405 5400 ntAPPRIS P1 BASIC7.27□□□□□ -1.25
Ccdc40Q8BI79 Gm44676-201ENSMUST00000208520 3055 ntBASIC7.27□□□□□ -1.25
Ccdc40Q8BI79 Slco1c1-201ENSMUST00000032362 3178 ntAPPRIS P2 TSL 1 (best) BASIC7.27□□□□□ -1.25
Ccdc40Q8BI79 Cenpf-204ENSMUST00000171929 11130 ntAPPRIS P1 TSL 5 BASIC7.27□□□□□ -1.25
Ccdc40Q8BI79 5430427O19Rik-201ENSMUST00000113976 3754 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
Ccdc40Q8BI79 Nlrp1c-ps-202ENSMUST00000174668 3422 ntBASIC7.27□□□□□ -1.25
Ccdc40Q8BI79 Sfmbt2-201ENSMUST00000041105 7874 ntAPPRIS ALT2 TSL 5 BASIC7.27□□□□□ -1.25
Ccdc40Q8BI79 Gja6-201ENSMUST00000069417 2017 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
Ccdc40Q8BI79 C430042M11Rik-201ENSMUST00000180515 1617 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
Ccdc40Q8BI79 Serpinb1c-201ENSMUST00000021834 1633 ntAPPRIS P1 TSL 5 BASIC7.27□□□□□ -1.25
Ccdc40Q8BI79 Cyp2j7-201ENSMUST00000162514 1515 ntAPPRIS P1 TSL 5 BASIC7.27□□□□□ -1.25
Ccdc40Q8BI79 Copa-201ENSMUST00000027833 4351 ntTSL 5 BASIC7.27□□□□□ -1.25
Ccdc40Q8BI79 AC152922.2-201ENSMUST00000213353 3879 ntBASIC7.27□□□□□ -1.25
Ccdc40Q8BI79 Csde1-214ENSMUST00000199240 3457 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
Ccdc40Q8BI79 Olfr1418-202ENSMUST00000214796 4046 ntAPPRIS P1 TSL 5 BASIC7.26□□□□□ -1.25
Ccdc40Q8BI79 Gm26861-201ENSMUST00000180807 5278 ntTSL 5 BASIC7.26□□□□□ -1.25
Ccdc40Q8BI79 Serpinb6b-202ENSMUST00000110293 2193 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
Ccdc40Q8BI79 CT030181.1-201ENSMUST00000089534 3549 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
Ccdc40Q8BI79 Zfp37-204ENSMUST00000220873 1985 ntAPPRIS ALT2 TSL 5 BASIC7.26□□□□□ -1.25
Ccdc40Q8BI79 Gm3629-201ENSMUST00000171706 1756 ntAPPRIS P1 TSL 5 BASIC7.26□□□□□ -1.25
Ccdc40Q8BI79 Ftmt-201ENSMUST00000025388 1451 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
Ccdc40Q8BI79 Tshr-202ENSMUST00000021346 4311 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
Ccdc40Q8BI79 Gm42711-201ENSMUST00000197060 2302 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
Ccdc40Q8BI79 Gm31267-201ENSMUST00000218941 1397 ntTSL 3 BASIC7.26□□□□□ -1.25
Ccdc40Q8BI79 Sell-203ENSMUST00000192047 5703 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
Ccdc40Q8BI79 Prokr2-204ENSMUST00000142766 3932 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
Ccdc40Q8BI79 Vmn1r81-202ENSMUST00000227080 13256 ntAPPRIS ALT2 BASIC7.26□□□□□ -1.25
Ccdc40Q8BI79 Mir503-201ENSMUST00000102168 71 ntBASIC7.26□□□□□ -1.25
Ccdc40Q8BI79 Igkv14-126-201ENSMUST00000103310 358 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
Ccdc40Q8BI79 Olfr1079-202ENSMUST00000111582 2141 ntAPPRIS ALT2 TSL 3 BASIC7.26□□□□□ -1.25
Ccdc40Q8BI79 Gm11865-201ENSMUST00000118093 859 ntBASIC7.26□□□□□ -1.25
Ccdc40Q8BI79 Gm12072-201ENSMUST00000118293 715 ntBASIC7.26□□□□□ -1.25
Ccdc40Q8BI79 Gm13988-201ENSMUST00000119363 288 ntBASIC7.26□□□□□ -1.25
Ccdc40Q8BI79 Gm15362-201ENSMUST00000121459 388 ntBASIC7.26□□□□□ -1.25
Ccdc40Q8BI79 Sh3d2c-ps1-201ENSMUST00000121498 904 ntBASIC7.26□□□□□ -1.25
Ccdc40Q8BI79 Gm10552-202ENSMUST00000161763 717 ntTSL 5 BASIC7.26□□□□□ -1.25
Ccdc40Q8BI79 Gm16026-205ENSMUST00000162923 641 ntBASIC7.26□□□□□ -1.25
Ccdc40Q8BI79 Gm7502-201ENSMUST00000169235 733 ntBASIC7.26□□□□□ -1.25
Ccdc40Q8BI79 Crxos-205ENSMUST00000171280 571 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
Ccdc40Q8BI79 Gm5261-201ENSMUST00000185860 713 ntBASIC7.26□□□□□ -1.25
Ccdc40Q8BI79 AV026068-205ENSMUST00000186386 762 ntTSL 5 BASIC7.26□□□□□ -1.25
Ccdc40Q8BI79 Gm29566-201ENSMUST00000190627 457 ntTSL 5 BASIC7.26□□□□□ -1.25
Ccdc40Q8BI79 Gm28070-201ENSMUST00000191502 445 ntBASIC7.26□□□□□ -1.25
Ccdc40Q8BI79 A930005N03Rik-201ENSMUST00000194920 1247 ntBASIC7.26□□□□□ -1.25
Ccdc40Q8BI79 Gm37017-201ENSMUST00000195266 747 ntBASIC7.26□□□□□ -1.25
Ccdc40Q8BI79 Gm2762-203ENSMUST00000201658 1234 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
Ccdc40Q8BI79 Gm7789-201ENSMUST00000210473 701 ntTSL 3 BASIC7.26□□□□□ -1.25
Ccdc40Q8BI79 Gm36231-201ENSMUST00000211183 217 ntTSL 5 BASIC7.26□□□□□ -1.25
Ccdc40Q8BI79 Olfr342-202ENSMUST00000216275 3818 ntAPPRIS P1 TSL 5 BASIC7.26□□□□□ -1.25
Ccdc40Q8BI79 Gm18960-201ENSMUST00000222962 713 ntBASIC7.26□□□□□ -1.25
Ccdc40Q8BI79 Gcnt2-204ENSMUST00000223570 335 ntBASIC7.26□□□□□ -1.25
Ccdc40Q8BI79 Diaph3-204ENSMUST00000226254 682 ntBASIC7.26□□□□□ -1.25
Ccdc40Q8BI79 CT025630.2-201ENSMUST00000228293 487 ntBASIC7.26□□□□□ -1.25
Ccdc40Q8BI79 Odf3l1-201ENSMUST00000055036 1080 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
Ccdc40Q8BI79 Serpina1e-201ENSMUST00000085054 1295 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
Ccdc40Q8BI79 Vmn1r15-201ENSMUST00000228297 2021 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
Ccdc40Q8BI79 Abca4-207ENSMUST00000141135 3606 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
Ccdc40Q8BI79 Zfand4-201ENSMUST00000036503 3123 ntAPPRIS P5 TSL 5 BASIC7.26□□□□□ -1.25
Ccdc40Q8BI79 Pramel4-202ENSMUST00000091676 2399 ntAPPRIS P2 TSL 1 (best) BASIC7.26□□□□□ -1.25
Ccdc40Q8BI79 Cab39l-201ENSMUST00000022553 3037 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
Ccdc40Q8BI79 Gm10030-203ENSMUST00000197321 3824 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
Ccdc40Q8BI79 Gm44661-201ENSMUST00000208830 3503 ntBASIC7.26□□□□□ -1.25
Ccdc40Q8BI79 Sntg1-210ENSMUST00000191683 4510 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
Ccdc40Q8BI79 Olfr312-202ENSMUST00000216407 3776 ntAPPRIS P1 TSL 5 BASIC7.25□□□□□ -1.25
Ccdc40Q8BI79 Olfr1396-204ENSMUST00000215553 4237 ntAPPRIS P1 TSL 5 BASIC7.25□□□□□ -1.25
Ccdc40Q8BI79 Rasgrp3-201ENSMUST00000095204 4657 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Retrieved 100 of 76,532 protein–RNA pairs in 113.2 ms