Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Gm28109-201ENSMUST00000189979 2167 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Nup98Q6PFD9 D6Ertd474e-201ENSMUST00000100817 2149 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Nup98Q6PFD9 Sirpb1c-205ENSMUST00000108354 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC8.01□□□□□ -1.13
Nup98Q6PFD9 Gm21719-201ENSMUST00000115940 693 ntAPPRIS P1 BASIC8.01□□□□□ -1.13
Nup98Q6PFD9 Gm6977-201ENSMUST00000121568 512 ntBASIC8.01□□□□□ -1.13
Nup98Q6PFD9 Gm26410-201ENSMUST00000157670 261 ntBASIC8.01□□□□□ -1.13
Nup98Q6PFD9 Gm25904-201ENSMUST00000158491 143 ntBASIC8.01□□□□□ -1.13
Nup98Q6PFD9 Gm17201-201ENSMUST00000167226 390 ntTSL 5 BASIC8.01□□□□□ -1.13
Nup98Q6PFD9 Kcnj13-202ENSMUST00000174179 261 ntTSL 5 BASIC8.01□□□□□ -1.13
Nup98Q6PFD9 Gm29357-201ENSMUST00000186877 698 ntBASIC8.01□□□□□ -1.13
Nup98Q6PFD9 1700108F19Rik-207ENSMUST00000191384 210 ntTSL 3 BASIC8.01□□□□□ -1.13
Nup98Q6PFD9 Gm36448-201ENSMUST00000199916 438 ntBASIC8.01□□□□□ -1.13
Nup98Q6PFD9 Gm20052-204ENSMUST00000202443 648 ntTSL 2 BASIC8.01□□□□□ -1.13
Nup98Q6PFD9 Gm45044-201ENSMUST00000208078 396 ntTSL 5 BASIC8.01□□□□□ -1.13
Nup98Q6PFD9 AC163621.3-201ENSMUST00000221738 1033 ntTSL 5 BASIC8.01□□□□□ -1.13
Nup98Q6PFD9 Sfrp4-204ENSMUST00000222992 1062 ntTSL 5 BASIC8.01□□□□□ -1.13
Nup98Q6PFD9 AC170086.2-201ENSMUST00000224733 803 ntBASIC8.01□□□□□ -1.13
Nup98Q6PFD9 Matr3-205ENSMUST00000186796 1854 ntTSL 5 BASIC8□□□□□ -1.13
Nup98Q6PFD9 Nfat5-214ENSMUST00000169453 13380 ntAPPRIS P3 TSL 5 BASIC8□□□□□ -1.13
Nup98Q6PFD9 Cd300a-201ENSMUST00000045151 4633 ntAPPRIS ALT2 TSL 1 (best) BASIC8□□□□□ -1.13
Nup98Q6PFD9 Olfr20-202ENSMUST00000120137 2390 ntAPPRIS P1 TSL 2 BASIC8□□□□□ -1.13
Nup98Q6PFD9 Pkn2-210ENSMUST00000174422 2904 ntTSL 5 BASIC8□□□□□ -1.13
Nup98Q6PFD9 Gm36799-202ENSMUST00000215783 1634 ntTSL 5 BASIC8□□□□□ -1.13
Nup98Q6PFD9 Fbxl5-203ENSMUST00000114047 2762 ntTSL 1 (best) BASIC8□□□□□ -1.13
Nup98Q6PFD9 Zdhhc11-201ENSMUST00000091493 1460 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Nup98Q6PFD9 Erg-202ENSMUST00000113846 3249 ntAPPRIS P3 TSL 1 (best) BASIC8□□□□□ -1.13
Nup98Q6PFD9 Spag17os-202ENSMUST00000145279 3219 ntTSL 1 (best) BASIC8□□□□□ -1.13
Nup98Q6PFD9 Mnd1-ps-202ENSMUST00000224435 2574 ntBASIC8□□□□□ -1.13
Nup98Q6PFD9 Tpte-201ENSMUST00000077194 2549 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Nup98Q6PFD9 Gm19210-201ENSMUST00000199562 1350 ntBASIC8□□□□□ -1.13
Nup98Q6PFD9 Olfr775-202ENSMUST00000214109 3598 ntAPPRIS P1 TSL 5 BASIC8□□□□□ -1.13
Nup98Q6PFD9 Muc5ac-203ENSMUST00000163321 8505 ntAPPRIS ALT2 TSL 5 BASIC8□□□□□ -1.13
Nup98Q6PFD9 Myl2-202ENSMUST00000111750 729 ntTSL 2 BASIC8□□□□□ -1.13
Nup98Q6PFD9 Vmn1r-ps111-201ENSMUST00000121014 997 ntBASIC8□□□□□ -1.13
Nup98Q6PFD9 Defb28-201ENSMUST00000121912 397 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Nup98Q6PFD9 Vmn1r208-201ENSMUST00000124841 927 ntAPPRIS P1 BASIC8□□□□□ -1.13
Nup98Q6PFD9 Gm17096-201ENSMUST00000172037 733 ntTSL 5 BASIC8□□□□□ -1.13
Nup98Q6PFD9 Mir5107-201ENSMUST00000175586 88 ntBASIC8□□□□□ -1.13
Nup98Q6PFD9 Gm27507-201ENSMUST00000184199 93 ntBASIC8□□□□□ -1.13
Nup98Q6PFD9 Gm29587-201ENSMUST00000189898 332 ntTSL 5 BASIC8□□□□□ -1.13
Nup98Q6PFD9 1700066C05Rik-201ENSMUST00000191029 407 ntTSL 1 (best) BASIC8□□□□□ -1.13
Nup98Q6PFD9 1700013A02Rik-201ENSMUST00000202969 645 ntBASIC8□□□□□ -1.13
Nup98Q6PFD9 AC160138.1-201ENSMUST00000217965 588 ntTSL 3 BASIC8□□□□□ -1.13
Nup98Q6PFD9 AC105324.1-201ENSMUST00000227844 386 ntBASIC8□□□□□ -1.13
Nup98Q6PFD9 Itgae-201ENSMUST00000006101 3845 ntAPPRIS P4 TSL 1 (best) BASIC8□□□□□ -1.13
Nup98Q6PFD9 Pifo-202ENSMUST00000066319 899 ntAPPRIS ALT2 TSL 1 (best) BASIC8□□□□□ -1.13
Nup98Q6PFD9 Gm14762-201ENSMUST00000105109 1771 ntBASIC8□□□□□ -1.13
Nup98Q6PFD9 4833423E24Rik-201ENSMUST00000099923 2272 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Nup98Q6PFD9 Kif26b-202ENSMUST00000161017 13749 ntAPPRIS P2 TSL 1 (best) BASIC8□□□□□ -1.13
Nup98Q6PFD9 Olfr1348-210ENSMUST00000214383 2582 ntAPPRIS P1 TSL 5 BASIC8□□□□□ -1.13
Nup98Q6PFD9 7420700N18Rik-201ENSMUST00000209524 1644 ntTSL 5 BASIC8□□□□□ -1.13
Nup98Q6PFD9 Vps39-202ENSMUST00000102501 4384 ntTSL 1 (best) BASIC8□□□□□ -1.13
Nup98Q6PFD9 Gm15930-201ENSMUST00000156603 2037 ntBASIC8□□□□□ -1.13
Nup98Q6PFD9 Lhfpl2-204ENSMUST00000121618 4209 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Nup98Q6PFD9 Gm46123-201ENSMUST00000217447 6424 ntTSL 5 BASIC8□□□□□ -1.13
Nup98Q6PFD9 Gm17173-201ENSMUST00000168000 2867 ntTSL 1 (best) BASIC8□□□□□ -1.13
Nup98Q6PFD9 Zfp827-202ENSMUST00000098614 7581 ntAPPRIS P3 TSL 1 (best) BASIC8□□□□□ -1.13
Nup98Q6PFD9 Skiv2l2-201ENSMUST00000022281 3689 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Nup98Q6PFD9 Adgre1-202ENSMUST00000086763 3245 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Nup98Q6PFD9 Gm31805-201ENSMUST00000211921 4031 ntTSL 3 BASIC8□□□□□ -1.13
Nup98Q6PFD9 Slco1a4-201ENSMUST00000032364 2252 ntAPPRIS P1 TSL 2 BASIC8□□□□□ -1.13
Nup98Q6PFD9 Myh15-201ENSMUST00000168680 6340 ntAPPRIS P1 TSL 5 BASIC7.99□□□□□ -1.13
Nup98Q6PFD9 Itsn1-208ENSMUST00000114002 14012 ntAPPRIS P2 TSL 5 BASIC7.99□□□□□ -1.13
Nup98Q6PFD9 Adgrl4-201ENSMUST00000046977 4106 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Nup98Q6PFD9 Gm26846-201ENSMUST00000181865 4869 ntTSL 5 BASIC7.99□□□□□ -1.13
Nup98Q6PFD9 Gprasp1-202ENSMUST00000113145 5640 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Nup98Q6PFD9 Gm14935-201ENSMUST00000121528 1708 ntBASIC7.99□□□□□ -1.13
Nup98Q6PFD9 Tgtp1-201ENSMUST00000068063 2823 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Nup98Q6PFD9 Olfr1417-203ENSMUST00000214887 3582 ntAPPRIS P1 TSL 5 BASIC7.99□□□□□ -1.13
Nup98Q6PFD9 Igkv9-120-201ENSMUST00000103316 353 ntAPPRIS P1 BASIC7.99□□□□□ -1.13
Nup98Q6PFD9 Gm15618-201ENSMUST00000121610 452 ntBASIC7.99□□□□□ -1.13
Nup98Q6PFD9 Gm12963-203ENSMUST00000156271 388 ntTSL 5 BASIC7.99□□□□□ -1.13
Nup98Q6PFD9 Gm22552-201ENSMUST00000157796 337 ntBASIC7.99□□□□□ -1.13
Nup98Q6PFD9 Gm23386-201ENSMUST00000158585 144 ntBASIC7.99□□□□□ -1.13
Nup98Q6PFD9 Gm25675-201ENSMUST00000174979 118 ntBASIC7.99□□□□□ -1.13
Nup98Q6PFD9 AC165292.1-201ENSMUST00000215218 620 ntBASIC7.99□□□□□ -1.13
Nup98Q6PFD9 Ss18l2-205ENSMUST00000215833 479 ntTSL 3 BASIC7.99□□□□□ -1.13
Nup98Q6PFD9 Tipin-201ENSMUST00000034964 1211 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Nup98Q6PFD9 Itch-201ENSMUST00000029126 5159 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Nup98Q6PFD9 Rdh11-203ENSMUST00000161204 3262 ntAPPRIS P2 TSL 1 (best) BASIC7.99□□□□□ -1.13
Nup98Q6PFD9 Eif4a2-203ENSMUST00000115341 1875 ntAPPRIS ALT1 TSL 5 BASIC7.99□□□□□ -1.13
Nup98Q6PFD9 Mapk10-205ENSMUST00000128869 2518 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Nup98Q6PFD9 Dab2-204ENSMUST00000110664 4450 ntAPPRIS ALT2 TSL 5 BASIC7.99□□□□□ -1.13
Nup98Q6PFD9 Pkd1-201ENSMUST00000035565 14164 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Nup98Q6PFD9 Dnajb7-201ENSMUST00000057236 1374 ntAPPRIS P1 BASIC7.99□□□□□ -1.13
Nup98Q6PFD9 Piwil2-201ENSMUST00000048129 4916 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Nup98Q6PFD9 Slc17a4-201ENSMUST00000021769 1604 ntAPPRIS P2 TSL 5 BASIC7.99□□□□□ -1.13
Nup98Q6PFD9 Serpind1-201ENSMUST00000023450 2191 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Nup98Q6PFD9 Olfr524-202ENSMUST00000215815 5044 ntAPPRIS P1 TSL 5 BASIC7.99□□□□□ -1.13
Nup98Q6PFD9 Zfp455-202ENSMUST00000120861 2712 ntAPPRIS P1 TSL 2 BASIC7.99□□□□□ -1.13
Nup98Q6PFD9 Gm28583-201ENSMUST00000188903 2141 ntBASIC7.99□□□□□ -1.13
Nup98Q6PFD9 Gm6181-201ENSMUST00000117187 264 ntBASIC7.99□□□□□ -1.13
Nup98Q6PFD9 Scgb2b23-ps-201ENSMUST00000122094 330 ntBASIC7.99□□□□□ -1.13
Nup98Q6PFD9 Gm15835-201ENSMUST00000127697 356 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Nup98Q6PFD9 Gm14343-201ENSMUST00000154524 731 ntTSL 3 BASIC7.99□□□□□ -1.13
Nup98Q6PFD9 Sox5os2-201ENSMUST00000156443 627 ntTSL 3 BASIC7.99□□□□□ -1.13
Nup98Q6PFD9 Gm17140-201ENSMUST00000169163 627 ntTSL 3 BASIC7.99□□□□□ -1.13
Nup98Q6PFD9 Gm4152-201ENSMUST00000172675 259 ntBASIC7.99□□□□□ -1.13
Nup98Q6PFD9 Gm2916-201ENSMUST00000178392 384 ntAPPRIS P1 TSL 5 BASIC7.99□□□□□ -1.13
Nup98Q6PFD9 Gm10410-201ENSMUST00000180138 384 ntBASIC7.99□□□□□ -1.13
Retrieved 100 of 76,532 protein–RNA pairs in 77.9 ms