Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Gm34623-201ENSMUST00000210900 977 ntTSL 5 BASIC8.21□□□□□ -1.1
Vps54Q5SPW0 4933432G23Rik-201ENSMUST00000213675 840 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Vps54Q5SPW0 AC131795.1-201ENSMUST00000219632 426 ntBASIC8.21□□□□□ -1.1
Vps54Q5SPW0 AC170913.1-201ENSMUST00000221418 758 ntTSL 5 BASIC8.21□□□□□ -1.1
Vps54Q5SPW0 AC138329.1-201ENSMUST00000225040 471 ntBASIC8.21□□□□□ -1.1
Vps54Q5SPW0 Gria3-202ENSMUST00000115103 3081 ntAPPRIS ALT1 TSL 5 BASIC8.21□□□□□ -1.1
Vps54Q5SPW0 AC129308.2-203ENSMUST00000224109 2385 ntBASIC8.21□□□□□ -1.1
Vps54Q5SPW0 Atp2b4-201ENSMUST00000048953 8292 ntAPPRIS ALT2 TSL 1 (best) BASIC8.21□□□□□ -1.1
Vps54Q5SPW0 Nsrp1-201ENSMUST00000102494 3114 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Vps54Q5SPW0 Pira2-202ENSMUST00000119469 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC8.2□□□□□ -1.1
Vps54Q5SPW0 Vmn2r-ps103-201ENSMUST00000222960 2349 ntBASIC8.2□□□□□ -1.1
Vps54Q5SPW0 Ank3-228ENSMUST00000182692 3833 ntTSL 5 BASIC8.2□□□□□ -1.1
Vps54Q5SPW0 Ints9-201ENSMUST00000043914 2674 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Vps54Q5SPW0 Pclo-201ENSMUST00000030691 20084 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
Vps54Q5SPW0 Gm32305-201ENSMUST00000221742 1899 ntTSL 5 BASIC8.2□□□□□ -1.1
Vps54Q5SPW0 Rab8b-201ENSMUST00000041139 4733 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Vps54Q5SPW0 Ighv1-31-201ENSMUST00000103511 294 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
Vps54Q5SPW0 Ighv1-37-201ENSMUST00000103514 348 ntAPPRIS ALT2 BASIC8.2□□□□□ -1.1
Vps54Q5SPW0 Ighv1-42-201ENSMUST00000103516 294 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
Vps54Q5SPW0 Ighv1-43-201ENSMUST00000103517 294 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
Vps54Q5SPW0 Ighv1-66-201ENSMUST00000103537 399 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
Vps54Q5SPW0 Ighv1-75-201ENSMUST00000103544 373 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
Vps54Q5SPW0 Gm11501-201ENSMUST00000118039 581 ntBASIC8.2□□□□□ -1.1
Vps54Q5SPW0 Gm8577-201ENSMUST00000122420 986 ntBASIC8.2□□□□□ -1.1
Vps54Q5SPW0 Gm16343-201ENSMUST00000162027 410 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Vps54Q5SPW0 Mpped2-201ENSMUST00000016530 1217 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Vps54Q5SPW0 Cyp2c53-ps-201ENSMUST00000175649 897 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Vps54Q5SPW0 Gm29156-201ENSMUST00000187764 499 ntBASIC8.2□□□□□ -1.1
Vps54Q5SPW0 Ighv1-29-201ENSMUST00000194116 342 ntBASIC8.2□□□□□ -1.1
Vps54Q5SPW0 Gm5711-201ENSMUST00000197896 421 ntBASIC8.2□□□□□ -1.1
Vps54Q5SPW0 2210412B16Rik-201ENSMUST00000201281 498 ntBASIC8.2□□□□□ -1.1
Vps54Q5SPW0 Gm44111-201ENSMUST00000204649 399 ntBASIC8.2□□□□□ -1.1
Vps54Q5SPW0 Gm45122-201ENSMUST00000206376 784 ntBASIC8.2□□□□□ -1.1
Vps54Q5SPW0 Gm45335-201ENSMUST00000210618 401 ntTSL 5 BASIC8.2□□□□□ -1.1
Vps54Q5SPW0 Gm45345-201ENSMUST00000211427 555 ntTSL 2 BASIC8.2□□□□□ -1.1
Vps54Q5SPW0 AC122273.1-202ENSMUST00000213884 695 ntTSL 3 BASIC8.2□□□□□ -1.1
Vps54Q5SPW0 Gm39463-201ENSMUST00000214575 735 ntTSL 3 BASIC8.2□□□□□ -1.1
Vps54Q5SPW0 Serpina3a-201ENSMUST00000021496 1269 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
Vps54Q5SPW0 AC102569.1-204ENSMUST00000222816 793 ntTSL 3 BASIC8.2□□□□□ -1.1
Vps54Q5SPW0 AC160962.1-202ENSMUST00000225859 1116 ntAPPRIS ALT2 BASIC8.2□□□□□ -1.1
Vps54Q5SPW0 Mir135a-1-201ENSMUST00000083473 90 ntBASIC8.2□□□□□ -1.1
Vps54Q5SPW0 Synpr-202ENSMUST00000112656 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Vps54Q5SPW0 Mroh4-201ENSMUST00000023271 3583 ntAPPRIS P2 TSL 1 (best) BASIC8.2□□□□□ -1.1
Vps54Q5SPW0 Prkd3-201ENSMUST00000003191 5517 ntAPPRIS P3 TSL 1 (best) BASIC8.2□□□□□ -1.1
Vps54Q5SPW0 Shprh-202ENSMUST00000054814 7225 ntAPPRIS ALT2 TSL 1 (best) BASIC8.2□□□□□ -1.1
Vps54Q5SPW0 Gm28055-202ENSMUST00000189576 1301 ntTSL 3 BASIC8.2□□□□□ -1.1
Vps54Q5SPW0 Bmi1-202ENSMUST00000051929 2747 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Vps54Q5SPW0 Gm37595-201ENSMUST00000192668 1742 ntBASIC8.2□□□□□ -1.1
Vps54Q5SPW0 Gm43181-201ENSMUST00000197001 2072 ntBASIC8.2□□□□□ -1.1
Vps54Q5SPW0 T2-201ENSMUST00000163578 1755 ntTSL 5 BASIC8.2□□□□□ -1.1
Vps54Q5SPW0 Vmn1r196-202ENSMUST00000226245 5312 ntAPPRIS ALT2 BASIC8.2□□□□□ -1.1
Vps54Q5SPW0 Mrpl48-208ENSMUST00000150042 4285 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Vps54Q5SPW0 Sox5-214ENSMUST00000170367 7184 ntTSL 5 BASIC8.2□□□□□ -1.1
Vps54Q5SPW0 Gm42523-201ENSMUST00000199378 2872 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Vps54Q5SPW0 Sox5-201ENSMUST00000038815 7243 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Vps54Q5SPW0 4933425L06Rik-201ENSMUST00000022232 2157 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Vps54Q5SPW0 Clca4a-201ENSMUST00000029923 3004 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Vps54Q5SPW0 Nrk-202ENSMUST00000113052 8043 ntAPPRIS ALT2 TSL 5 BASIC8.19□□□□□ -1.1
Vps54Q5SPW0 Olfr452-203ENSMUST00000215719 2728 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
Vps54Q5SPW0 Vmn1r196-203ENSMUST00000227516 5122 ntBASIC8.19□□□□□ -1.1
Vps54Q5SPW0 Olfr1412-202ENSMUST00000190505 3663 ntAPPRIS P1 TSL 3 BASIC8.19□□□□□ -1.1
Vps54Q5SPW0 9330199G10Rik-201ENSMUST00000221601 2072 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Vps54Q5SPW0 Gm13156-201ENSMUST00000118348 321 ntBASIC8.19□□□□□ -1.1
Vps54Q5SPW0 Gm6987-201ENSMUST00000119319 428 ntBASIC8.19□□□□□ -1.1
Vps54Q5SPW0 Gm15311-201ENSMUST00000119682 282 ntBASIC8.19□□□□□ -1.1
Vps54Q5SPW0 Gm15305-201ENSMUST00000120354 288 ntBASIC8.19□□□□□ -1.1
Vps54Q5SPW0 Gm16052-201ENSMUST00000129681 505 ntTSL 2 BASIC8.19□□□□□ -1.1
Vps54Q5SPW0 Gm15123-201ENSMUST00000138988 339 ntTSL 3 BASIC8.19□□□□□ -1.1
Vps54Q5SPW0 0610043K17Rik-202ENSMUST00000142581 372 ntTSL 2 BASIC8.19□□□□□ -1.1
Vps54Q5SPW0 Gm11697-201ENSMUST00000149226 525 ntTSL 2 BASIC8.19□□□□□ -1.1
Vps54Q5SPW0 Vmn1r29-201ENSMUST00000168416 1023 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
Vps54Q5SPW0 Gm20637-201ENSMUST00000175715 462 ntBASIC8.19□□□□□ -1.1
Vps54Q5SPW0 Crnde-205ENSMUST00000179400 651 ntTSL 2 BASIC8.19□□□□□ -1.1
Vps54Q5SPW0 Polr2k-202ENSMUST00000180159 489 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Vps54Q5SPW0 Gm21392-201ENSMUST00000182950 972 ntBASIC8.19□□□□□ -1.1
Vps54Q5SPW0 Gm5345-201ENSMUST00000183076 1014 ntBASIC8.19□□□□□ -1.1
Vps54Q5SPW0 Gm29357-201ENSMUST00000186877 698 ntBASIC8.19□□□□□ -1.1
Vps54Q5SPW0 Gm29483-201ENSMUST00000188188 1078 ntTSL 3 BASIC8.19□□□□□ -1.1
Vps54Q5SPW0 Gm19185-201ENSMUST00000196365 643 ntBASIC8.19□□□□□ -1.1
Vps54Q5SPW0 Gm4751-201ENSMUST00000200620 1105 ntBASIC8.19□□□□□ -1.1
Vps54Q5SPW0 Gpr19-210ENSMUST00000203762 498 ntTSL 3 BASIC8.19□□□□□ -1.1
Vps54Q5SPW0 Gm18012-201ENSMUST00000204558 773 ntBASIC8.19□□□□□ -1.1
Vps54Q5SPW0 Dynlrb2-202ENSMUST00000213007 527 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Vps54Q5SPW0 Gm46203-201ENSMUST00000218130 478 ntBASIC8.19□□□□□ -1.1
Vps54Q5SPW0 AC123917.1-201ENSMUST00000228063 1048 ntBASIC8.19□□□□□ -1.1
Vps54Q5SPW0 Gpr87-201ENSMUST00000056898 1080 ntBASIC8.19□□□□□ -1.1
Vps54Q5SPW0 Olfr195-201ENSMUST00000075381 995 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
Vps54Q5SPW0 Csde1-201ENSMUST00000029446 4318 ntAPPRIS P3 TSL 1 (best) BASIC8.19□□□□□ -1.1
Vps54Q5SPW0 Gm29091-201ENSMUST00000187289 2159 ntTSL 5 BASIC8.19□□□□□ -1.1
Vps54Q5SPW0 Gm43728-201ENSMUST00000198817 2622 ntBASIC8.19□□□□□ -1.1
Vps54Q5SPW0 Krt222-202ENSMUST00000103132 3072 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Vps54Q5SPW0 Gm6101-201ENSMUST00000195384 1867 ntBASIC8.19□□□□□ -1.1
Vps54Q5SPW0 Gm5454-201ENSMUST00000052030 1453 ntBASIC8.19□□□□□ -1.1
Vps54Q5SPW0 Nt5c1b-205ENSMUST00000217944 1975 ntAPPRIS ALT2 TSL 5 BASIC8.19□□□□□ -1.1
Vps54Q5SPW0 St18-212ENSMUST00000151281 3533 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Vps54Q5SPW0 Gm43876-201ENSMUST00000203831 3229 ntBASIC8.18□□□□□ -1.1
Vps54Q5SPW0 C030029H02Rik-202ENSMUST00000210356 2980 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Vps54Q5SPW0 Rxfp1-201ENSMUST00000078527 5382 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Vps54Q5SPW0 Vmn1r44-204ENSMUST00000226171 1877 ntBASIC8.18□□□□□ -1.1
Vps54Q5SPW0 Il1rl1-201ENSMUST00000053043 5053 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Retrieved 100 of 76,532 protein–RNA pairs in 97.9 ms