Protein–RNA interactions for Protein: Q4ACU6

Shank3, SH3 and multiple ankyrin repeat domains protein 3, mousemouse

Predictions only

Length 1,730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank3Q4ACU6 Cul4b-202ENSMUST00000050083 3090 ntAPPRIS P2 TSL 1 (best) BASIC8.47□□□□□ -1.05
Shank3Q4ACU6 Gm21103-201ENSMUST00000112737 984 ntAPPRIS ALT2 TSL 5 BASIC8.47□□□□□ -1.05
Shank3Q4ACU6 Gm3047-201ENSMUST00000164069 822 ntAPPRIS P5 TSL 5 BASIC8.47□□□□□ -1.05
Shank3Q4ACU6 Gm3029-201ENSMUST00000168306 984 ntAPPRIS P5 TSL 5 BASIC8.47□□□□□ -1.05
Shank3Q4ACU6 Mir6903-201ENSMUST00000183597 88 ntBASIC8.47□□□□□ -1.05
Shank3Q4ACU6 Gm7343-201ENSMUST00000194510 1061 ntBASIC8.47□□□□□ -1.05
Shank3Q4ACU6 Gm18838-201ENSMUST00000204855 886 ntBASIC8.47□□□□□ -1.05
Shank3Q4ACU6 Rpl7a-ps14-201ENSMUST00000205097 790 ntBASIC8.47□□□□□ -1.05
Shank3Q4ACU6 Olfr447-201ENSMUST00000055763 933 ntAPPRIS P1 BASIC8.47□□□□□ -1.05
Shank3Q4ACU6 Gm8844-201ENSMUST00000119460 2614 ntBASIC8.47□□□□□ -1.05
Shank3Q4ACU6 Srrm4os-201ENSMUST00000126959 3360 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Shank3Q4ACU6 Tnik-203ENSMUST00000159680 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC8.47□□□□□ -1.05
Shank3Q4ACU6 Pde10a-211ENSMUST00000149440 4897 ntAPPRIS ALT2 TSL 1 (best) BASIC8.47□□□□□ -1.05
Shank3Q4ACU6 Nrp2-205ENSMUST00000114155 6534 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Shank3Q4ACU6 Clip1-203ENSMUST00000111561 5883 ntAPPRIS ALT2 TSL 5 BASIC8.47□□□□□ -1.05
Shank3Q4ACU6 Gm10862-201ENSMUST00000193956 3350 ntBASIC8.47□□□□□ -1.05
Shank3Q4ACU6 Gm10825-201ENSMUST00000180537 4478 ntTSL 2 BASIC8.47□□□□□ -1.05
Shank3Q4ACU6 Gm26581-201ENSMUST00000181953 4479 ntTSL 2 BASIC8.47□□□□□ -1.05
Shank3Q4ACU6 4930480E11Rik-201ENSMUST00000035626 1486 ntAPPRIS P1 BASIC8.47□□□□□ -1.05
Shank3Q4ACU6 Olfr324-203ENSMUST00000216965 3691 ntAPPRIS ALT2 TSL 5 BASIC8.46□□□□□ -1.05
Shank3Q4ACU6 Gm37310-201ENSMUST00000195237 2968 ntBASIC8.46□□□□□ -1.05
Shank3Q4ACU6 4732416N19Rik-201ENSMUST00000203932 3479 ntBASIC8.46□□□□□ -1.05
Shank3Q4ACU6 Igkv9-120-201ENSMUST00000103316 353 ntAPPRIS P1 BASIC8.46□□□□□ -1.05
Shank3Q4ACU6 Gm23910-201ENSMUST00000104597 132 ntBASIC8.46□□□□□ -1.05
Shank3Q4ACU6 Sirpb1c-205ENSMUST00000108354 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC8.46□□□□□ -1.05
Shank3Q4ACU6 Cd200r3-205ENSMUST00000114613 950 ntAPPRIS ALT2 TSL 1 (best) BASIC8.46□□□□□ -1.05
Shank3Q4ACU6 Gm16511-201ENSMUST00000120019 564 ntBASIC8.46□□□□□ -1.05
Shank3Q4ACU6 D630011A20Rik-201ENSMUST00000180858 500 ntTSL 1 (best) BASIC8.46□□□□□ -1.05
Shank3Q4ACU6 Halr1-203ENSMUST00000189071 511 ntTSL 1 (best) BASIC8.46□□□□□ -1.05
Shank3Q4ACU6 Gm37475-201ENSMUST00000193107 1015 ntBASIC8.46□□□□□ -1.05
Shank3Q4ACU6 Igkv4-83-201ENSMUST00000196933 334 ntBASIC8.46□□□□□ -1.05
Shank3Q4ACU6 Olfr587-ps1-202ENSMUST00000209201 477 ntBASIC8.46□□□□□ -1.05
Shank3Q4ACU6 AC155941.1-201ENSMUST00000220223 529 ntBASIC8.46□□□□□ -1.05
Shank3Q4ACU6 Klrc3-201ENSMUST00000071149 715 ntAPPRIS P2 TSL 1 (best) BASIC8.46□□□□□ -1.05
Shank3Q4ACU6 Gm29824-201ENSMUST00000213183 3285 ntTSL 1 (best) BASIC8.46□□□□□ -1.05
Shank3Q4ACU6 Lhx4-201ENSMUST00000027740 5514 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
Shank3Q4ACU6 Iars-201ENSMUST00000047363 4396 ntAPPRIS P1 TSL 5 BASIC8.46□□□□□ -1.05
Shank3Q4ACU6 Gja6-201ENSMUST00000069417 2017 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Shank3Q4ACU6 Gm37647-201ENSMUST00000194556 3143 ntBASIC8.46□□□□□ -1.06
Shank3Q4ACU6 Gm44797-201ENSMUST00000208780 1837 ntBASIC8.46□□□□□ -1.06
Shank3Q4ACU6 Prdm16-203ENSMUST00000097759 8544 ntAPPRIS ALT2 TSL 5 BASIC8.46□□□□□ -1.06
Shank3Q4ACU6 Olfr780-202ENSMUST00000215503 2910 ntAPPRIS P1 TSL 5 BASIC8.46□□□□□ -1.06
Shank3Q4ACU6 Dzank1-201ENSMUST00000081982 6847 ntAPPRIS P2 TSL 1 (best) BASIC8.46□□□□□ -1.06
Shank3Q4ACU6 Atp13a4-208ENSMUST00000182627 4238 ntAPPRIS P3 TSL 5 BASIC8.46□□□□□ -1.06
Shank3Q4ACU6 Gm26289-201ENSMUST00000104169 131 ntBASIC8.46□□□□□ -1.06
Shank3Q4ACU6 Olfr50-201ENSMUST00000112950 1157 ntAPPRIS P1 BASIC8.46□□□□□ -1.06
Shank3Q4ACU6 Gm14745-201ENSMUST00000118480 1096 ntBASIC8.46□□□□□ -1.06
Shank3Q4ACU6 Olfr1063-ps1-201ENSMUST00000118807 942 ntBASIC8.46□□□□□ -1.06
Shank3Q4ACU6 Gmfg-ps-201ENSMUST00000121071 427 ntBASIC8.46□□□□□ -1.06
Shank3Q4ACU6 Bloc1s6os-201ENSMUST00000150154 696 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
Shank3Q4ACU6 Snora47-201ENSMUST00000157483 138 ntBASIC8.46□□□□□ -1.06
Shank3Q4ACU6 Gm25906-201ENSMUST00000158489 126 ntBASIC8.46□□□□□ -1.06
Shank3Q4ACU6 Csnk2b-207ENSMUST00000174024 883 ntTSL 5 BASIC8.46□□□□□ -1.06
Shank3Q4ACU6 1700064J06Rik-201ENSMUST00000187551 386 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
Shank3Q4ACU6 Gm43351-201ENSMUST00000198737 326 ntTSL 5 BASIC8.46□□□□□ -1.06
Shank3Q4ACU6 4933432G23Rik-201ENSMUST00000213675 840 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
Shank3Q4ACU6 AC163660.1-201ENSMUST00000223696 818 ntBASIC8.46□□□□□ -1.06
Shank3Q4ACU6 AC158521.1-202ENSMUST00000224352 645 ntBASIC8.46□□□□□ -1.06
Shank3Q4ACU6 AC170086.2-201ENSMUST00000224733 803 ntBASIC8.46□□□□□ -1.06
Shank3Q4ACU6 Galnt15-201ENSMUST00000022460 6326 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Shank3Q4ACU6 Hepacam2-201ENSMUST00000049985 2328 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Shank3Q4ACU6 Nup93-203ENSMUST00000211822 2674 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
Shank3Q4ACU6 Pgbd1-204ENSMUST00000148071 2600 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Shank3Q4ACU6 Tns1-201ENSMUST00000169786 9966 ntAPPRIS ALT2 TSL 5 BASIC8.45□□□□□ -1.06
Shank3Q4ACU6 9330175E14Rik-201ENSMUST00000180445 4852 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Shank3Q4ACU6 Wipf3-205ENSMUST00000163746 4102 ntAPPRIS ALT2 TSL 5 BASIC8.45□□□□□ -1.06
Shank3Q4ACU6 Paqr8-201ENSMUST00000068880 4704 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Shank3Q4ACU6 Fcgbp-203ENSMUST00000138392 7926 ntAPPRIS ALT2 TSL 5 BASIC8.45□□□□□ -1.06
Shank3Q4ACU6 Fcgbp-201ENSMUST00000076648 7928 ntAPPRIS P2 TSL 5 BASIC8.45□□□□□ -1.06
Shank3Q4ACU6 Psg26-201ENSMUST00000094798 2086 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Shank3Q4ACU6 Gm14635-202ENSMUST00000146535 1409 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Shank3Q4ACU6 Olfr1333-202ENSMUST00000214477 2996 ntAPPRIS ALT2 TSL 3 BASIC8.45□□□□□ -1.06
Shank3Q4ACU6 Gm7361-201ENSMUST00000074148 2995 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Shank3Q4ACU6 Gm37786-201ENSMUST00000191714 3225 ntBASIC8.45□□□□□ -1.06
Shank3Q4ACU6 Gm34923-201ENSMUST00000222673 5043 ntTSL 5 BASIC8.45□□□□□ -1.06
Shank3Q4ACU6 Ppfia2-201ENSMUST00000029404 5429 ntAPPRIS ALT2 TSL 1 (best) BASIC8.45□□□□□ -1.06
Shank3Q4ACU6 Svs1-201ENSMUST00000037696 2775 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Shank3Q4ACU6 Gm28587-201ENSMUST00000187181 3005 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Shank3Q4ACU6 Bdnf-210ENSMUST00000111051 4125 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Shank3Q4ACU6 Gm13455-201ENSMUST00000118767 517 ntBASIC8.45□□□□□ -1.06
Shank3Q4ACU6 Stau2-208ENSMUST00000144138 585 ntTSL 5 BASIC8.45□□□□□ -1.06
Shank3Q4ACU6 Gm13629-202ENSMUST00000152740 645 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Shank3Q4ACU6 Gm22599-201ENSMUST00000157597 132 ntBASIC8.45□□□□□ -1.06
Shank3Q4ACU6 Pde1c-208ENSMUST00000170774 2132 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Shank3Q4ACU6 Mir199b-201ENSMUST00000175066 110 ntBASIC8.45□□□□□ -1.06
Shank3Q4ACU6 Smim18-201ENSMUST00000179364 587 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Shank3Q4ACU6 Mir6361-201ENSMUST00000185079 101 ntBASIC8.45□□□□□ -1.06
Shank3Q4ACU6 Mir6952-201ENSMUST00000185092 61 ntBASIC8.45□□□□□ -1.06
Shank3Q4ACU6 Mir6906-201ENSMUST00000198998 58 ntBASIC8.45□□□□□ -1.06
Shank3Q4ACU6 Gm19708-201ENSMUST00000199386 543 ntTSL 2 BASIC8.45□□□□□ -1.06
Shank3Q4ACU6 Gm44239-201ENSMUST00000204228 271 ntBASIC8.45□□□□□ -1.06
Shank3Q4ACU6 Gm18103-201ENSMUST00000216621 779 ntBASIC8.45□□□□□ -1.06
Shank3Q4ACU6 AC168062.1-201ENSMUST00000228048 769 ntBASIC8.45□□□□□ -1.06
Shank3Q4ACU6 Bpifa2-201ENSMUST00000048103 978 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Shank3Q4ACU6 Olfr448-201ENSMUST00000058668 933 ntAPPRIS P1 BASIC8.45□□□□□ -1.06
Shank3Q4ACU6 Srgap3-203ENSMUST00000113169 8300 ntTSL 5 BASIC8.45□□□□□ -1.06
Shank3Q4ACU6 Rian-209ENSMUST00000182406 3476 ntBASIC8.45□□□□□ -1.06
Shank3Q4ACU6 Olfr727-202ENSMUST00000215317 2616 ntAPPRIS P1 TSL 5 BASIC8.45□□□□□ -1.06
Shank3Q4ACU6 Atad5-202ENSMUST00000108239 7266 ntAPPRIS ALT2 TSL 5 BASIC8.45□□□□□ -1.06
Shank3Q4ACU6 Atad5-201ENSMUST00000017694 7272 ntAPPRIS P2 TSL 1 (best) BASIC8.45□□□□□ -1.06
Retrieved 100 of 76,532 protein–RNA pairs in 85 ms