Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Gm20865-202ENSMUST00000181163 1225 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Trim43aQ3TL54 Gm26959-201ENSMUST00000182376 978 ntBASIC7.29□□□□□ -1.24
Trim43aQ3TL54 Gm21868-201ENSMUST00000185623 1230 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Trim43aQ3TL54 Gm29049-201ENSMUST00000185705 1224 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Trim43aQ3TL54 Gm20924-202ENSMUST00000186910 1230 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Trim43aQ3TL54 Gm20816-202ENSMUST00000187846 1225 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Trim43aQ3TL54 Gm20809-202ENSMUST00000187943 1224 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Trim43aQ3TL54 Gm21728-201ENSMUST00000188442 695 ntBASIC7.29□□□□□ -1.24
Trim43aQ3TL54 Gm21889-201ENSMUST00000188487 695 ntBASIC7.29□□□□□ -1.24
Trim43aQ3TL54 Gm20932-201ENSMUST00000189115 694 ntBASIC7.29□□□□□ -1.24
Trim43aQ3TL54 Gm21721-202ENSMUST00000189253 1225 ntAPPRIS P1 TSL 3 BASIC7.29□□□□□ -1.24
Trim43aQ3TL54 Gm21920-201ENSMUST00000190042 695 ntBASIC7.29□□□□□ -1.24
Trim43aQ3TL54 Gm28171-201ENSMUST00000190100 1226 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Trim43aQ3TL54 Gm20803-202ENSMUST00000190968 1230 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Trim43aQ3TL54 Gm20867-202ENSMUST00000190987 1224 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Trim43aQ3TL54 A930005N03Rik-201ENSMUST00000194920 1247 ntBASIC7.29□□□□□ -1.24
Trim43aQ3TL54 Gm38079-201ENSMUST00000195603 154 ntBASIC7.29□□□□□ -1.24
Trim43aQ3TL54 Gm26413-201ENSMUST00000196783 126 ntBASIC7.29□□□□□ -1.24
Trim43aQ3TL54 Gm42804-201ENSMUST00000199701 178 ntBASIC7.29□□□□□ -1.24
Trim43aQ3TL54 4930425L21Rik-202ENSMUST00000205073 871 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Trim43aQ3TL54 Gm44712-201ENSMUST00000206250 1076 ntBASIC7.29□□□□□ -1.24
Trim43aQ3TL54 Gm18860-201ENSMUST00000212029 764 ntBASIC7.29□□□□□ -1.24
Trim43aQ3TL54 AC122428.4-201ENSMUST00000213494 589 ntTSL 3 BASIC7.29□□□□□ -1.24
Trim43aQ3TL54 Olfr1251-203ENSMUST00000214750 1040 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
Trim43aQ3TL54 Gm34047-201ENSMUST00000223547 606 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Trim43aQ3TL54 Gcnt2-204ENSMUST00000223570 335 ntBASIC7.29□□□□□ -1.24
Trim43aQ3TL54 Olfr49-201ENSMUST00000059996 1030 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
Trim43aQ3TL54 Olfr420-201ENSMUST00000068403 1046 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
Trim43aQ3TL54 Gm24405-201ENSMUST00000083033 167 ntBASIC7.29□□□□□ -1.24
Trim43aQ3TL54 Eif4a2-203ENSMUST00000115341 1875 ntAPPRIS ALT1 TSL 5 BASIC7.29□□□□□ -1.24
Trim43aQ3TL54 AC154576.1-202ENSMUST00000223966 3320 ntBASIC7.29□□□□□ -1.24
Trim43aQ3TL54 Pja2-204ENSMUST00000172818 4740 ntAPPRIS P4 TSL 1 (best) BASIC7.29□□□□□ -1.24
Trim43aQ3TL54 Coro2a-203ENSMUST00000107757 4124 ntAPPRIS ALT2 TSL 1 (best) BASIC7.29□□□□□ -1.24
Trim43aQ3TL54 Gm18830-201ENSMUST00000199036 1396 ntBASIC7.29□□□□□ -1.24
Trim43aQ3TL54 Gimap9-201ENSMUST00000054050 1384 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Trim43aQ3TL54 Trappc8-206ENSMUST00000225661 5191 ntAPPRIS ALT2 BASIC7.29□□□□□ -1.24
Trim43aQ3TL54 Gm37914-201ENSMUST00000195317 2679 ntBASIC7.29□□□□□ -1.24
Trim43aQ3TL54 Pank1-202ENSMUST00000112460 2759 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Trim43aQ3TL54 Gm28440-201ENSMUST00000186328 1499 ntTSL 5 BASIC7.29□□□□□ -1.24
Trim43aQ3TL54 Vmn1r90-201ENSMUST00000185220 7144 ntAPPRIS P2 BASIC7.29□□□□□ -1.24
Trim43aQ3TL54 Ttc41-201ENSMUST00000061458 1815 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Trim43aQ3TL54 Ctage5-209ENSMUST00000175912 2885 ntTSL 5 BASIC7.29□□□□□ -1.24
Trim43aQ3TL54 Gm3608-201ENSMUST00000086725 2858 ntBASIC7.29□□□□□ -1.24
Trim43aQ3TL54 Sin3a-204ENSMUST00000167715 4961 ntAPPRIS P3 TSL 5 BASIC7.29□□□□□ -1.24
Trim43aQ3TL54 Cul4b-202ENSMUST00000050083 3090 ntAPPRIS P2 TSL 1 (best) BASIC7.29□□□□□ -1.24
Trim43aQ3TL54 Ptpra-202ENSMUST00000077303 3066 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Trim43aQ3TL54 Gm36660-201ENSMUST00000218323 3871 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
Trim43aQ3TL54 N4bp2-204ENSMUST00000201489 9055 ntAPPRIS P1 TSL 5 BASIC7.28□□□□□ -1.24
Trim43aQ3TL54 Sgms2-201ENSMUST00000090246 5801 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Trim43aQ3TL54 Nr1h5-202ENSMUST00000196135 1344 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
Trim43aQ3TL54 Nxpe4-203ENSMUST00000216998 4871 ntAPPRIS ALT2 TSL 2 BASIC7.28□□□□□ -1.24
Trim43aQ3TL54 Olfr432-203ENSMUST00000213381 4533 ntAPPRIS P1 TSL 5 BASIC7.28□□□□□ -1.24
Trim43aQ3TL54 Fam160a1-201ENSMUST00000094148 4280 ntAPPRIS P1 TSL 5 BASIC7.28□□□□□ -1.24
Trim43aQ3TL54 AC139350.2-201ENSMUST00000226508 2331 ntBASIC7.28□□□□□ -1.24
Trim43aQ3TL54 Atp13a5-201ENSMUST00000075806 4598 ntAPPRIS P3 TSL 1 (best) BASIC7.28□□□□□ -1.24
Trim43aQ3TL54 9930111J21Rik2-201ENSMUST00000093152 2403 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
Trim43aQ3TL54 9930111J21Rik1-201ENSMUST00000093153 2403 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
Trim43aQ3TL54 Synb-201ENSMUST00000059362 4055 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Trim43aQ3TL54 Csnk1g1-213ENSMUST00000206528 1740 ntTSL 5 BASIC7.28□□□□□ -1.24
Trim43aQ3TL54 Trbv1-201ENSMUST00000103262 417 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
Trim43aQ3TL54 Gm13871-201ENSMUST00000107318 936 ntAPPRIS ALT2 TSL 5 BASIC7.28□□□□□ -1.24
Trim43aQ3TL54 Gm11757-201ENSMUST00000107320 936 ntAPPRIS ALT2 TSL 5 BASIC7.28□□□□□ -1.24
Trim43aQ3TL54 Gm11758-201ENSMUST00000107326 936 ntAPPRIS ALT2 TSL 5 BASIC7.28□□□□□ -1.24
Trim43aQ3TL54 Gm14248-201ENSMUST00000117790 544 ntBASIC7.28□□□□□ -1.24
Trim43aQ3TL54 Gm12944-201ENSMUST00000119262 463 ntBASIC7.28□□□□□ -1.24
Trim43aQ3TL54 Gm14990-201ENSMUST00000122354 445 ntBASIC7.28□□□□□ -1.24
Trim43aQ3TL54 Gm12590-201ENSMUST00000134226 404 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
Trim43aQ3TL54 AC122263.2-201ENSMUST00000145909 586 ntTSL 3 BASIC7.28□□□□□ -1.24
Trim43aQ3TL54 Gm22035-201ENSMUST00000157284 228 ntBASIC7.28□□□□□ -1.24
Trim43aQ3TL54 Polr3g-204ENSMUST00000161920 733 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
Trim43aQ3TL54 Gm26910-201ENSMUST00000180450 698 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
Trim43aQ3TL54 Mir8094-201ENSMUST00000183361 117 ntBASIC7.28□□□□□ -1.24
Trim43aQ3TL54 Gm27401-201ENSMUST00000184052 173 ntBASIC7.28□□□□□ -1.24
Trim43aQ3TL54 Gm29197-201ENSMUST00000185922 702 ntBASIC7.28□□□□□ -1.24
Trim43aQ3TL54 Gm8101-201ENSMUST00000192796 478 ntBASIC7.28□□□□□ -1.24
Trim43aQ3TL54 4930590H14Rik-201ENSMUST00000193999 551 ntBASIC7.28□□□□□ -1.24
Trim43aQ3TL54 Gm31925-202ENSMUST00000194266 537 ntTSL 5 BASIC7.28□□□□□ -1.24
Trim43aQ3TL54 Gm43926-201ENSMUST00000203978 430 ntBASIC7.28□□□□□ -1.24
Trim43aQ3TL54 Gm44213-201ENSMUST00000204977 703 ntBASIC7.28□□□□□ -1.24
Trim43aQ3TL54 Gm30132-202ENSMUST00000212825 819 ntTSL 3 BASIC7.28□□□□□ -1.24
Trim43aQ3TL54 AC116502.1-201ENSMUST00000220989 291 ntBASIC7.28□□□□□ -1.24
Trim43aQ3TL54 AC125087.1-201ENSMUST00000227552 514 ntBASIC7.28□□□□□ -1.24
Trim43aQ3TL54 AC125117.2-201ENSMUST00000228344 1140 ntBASIC7.28□□□□□ -1.24
Trim43aQ3TL54 Gm5528-201ENSMUST00000076314 480 ntBASIC7.28□□□□□ -1.24
Trim43aQ3TL54 Cd40-203ENSMUST00000081310 668 ntAPPRIS ALT2 TSL 1 (best) BASIC7.28□□□□□ -1.24
Trim43aQ3TL54 Gm22504-201ENSMUST00000082963 139 ntBASIC7.28□□□□□ -1.24
Trim43aQ3TL54 Adgrg4-201ENSMUST00000096431 1137 ntTSL 2 BASIC7.28□□□□□ -1.24
Trim43aQ3TL54 Tnfsf4-201ENSMUST00000028024 1842 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Trim43aQ3TL54 Kcnj6-203ENSMUST00000165538 3637 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
Trim43aQ3TL54 Tulp4-201ENSMUST00000039655 9687 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Trim43aQ3TL54 Gm38218-201ENSMUST00000193555 4689 ntBASIC7.28□□□□□ -1.24
Trim43aQ3TL54 Frmpd4-203ENSMUST00000112147 8607 ntAPPRIS P3 TSL 1 (best) BASIC7.28□□□□□ -1.24
Trim43aQ3TL54 Atp2b1-201ENSMUST00000020107 7130 ntAPPRIS P1 TSL 5 BASIC7.28□□□□□ -1.24
Trim43aQ3TL54 Csnk1g1-201ENSMUST00000034949 7208 ntAPPRIS P2 TSL 1 (best) BASIC7.28□□□□□ -1.24
Trim43aQ3TL54 Gm30165-201ENSMUST00000218769 1961 ntTSL 5 BASIC7.28□□□□□ -1.24
Trim43aQ3TL54 Xpnpep3-203ENSMUST00000163754 5383 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Trim43aQ3TL54 Gm28798-201ENSMUST00000186372 2161 ntTSL 5 BASIC7.27□□□□□ -1.24
Trim43aQ3TL54 Rab3b-202ENSMUST00000106650 3327 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.24
Trim43aQ3TL54 Rnf219-202ENSMUST00000227640 1632 ntAPPRIS ALT2 BASIC7.27□□□□□ -1.25
Trim43aQ3TL54 AC022682.2-202ENSMUST00000224394 3943 ntBASIC7.27□□□□□ -1.25
Retrieved 100 of 76,532 protein–RNA pairs in 66.1 ms