Protein–RNA interactions for Protein: P97334

Nkx2-3, Homeobox protein Nkx-2.3, mousemouse

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-3P97334 Gm45861-201ENSMUST00000209669 7184 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
Nkx2-3P97334 Ttc9c-202ENSMUST00000096751 3509 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Nkx2-3P97334 4930519E07Rik-201ENSMUST00000200907 1665 ntBASIC9.47□□□□□ -0.89
Nkx2-3P97334 Gbp11-202ENSMUST00000171587 1329 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Nkx2-3P97334 4632411P08Rik-201ENSMUST00000181005 3237 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Nkx2-3P97334 Gm20489-201ENSMUST00000117736 1350 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
Nkx2-3P97334 Rassf2-202ENSMUST00000103182 4589 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
Nkx2-3P97334 Tph2-201ENSMUST00000006949 2626 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Nkx2-3P97334 Gm18957-201ENSMUST00000197623 1813 ntBASIC9.47□□□□□ -0.89
Nkx2-3P97334 Robo4-202ENSMUST00000115046 3878 ntAPPRIS ALT2 TSL 2 BASIC9.47□□□□□ -0.89
Nkx2-3P97334 Olfr1254-202ENSMUST00000111523 2650 ntAPPRIS P1 TSL 3 BASIC9.47□□□□□ -0.89
Nkx2-3P97334 Usp40-204ENSMUST00000187758 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Nkx2-3P97334 Nlrp9a-203ENSMUST00000117252 2796 ntTSL 2 BASIC9.46□□□□□ -0.89
Nkx2-3P97334 Gm26749-201ENSMUST00000181387 1933 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Nkx2-3P97334 St3gal1-201ENSMUST00000092640 4985 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Nkx2-3P97334 Prdm16-204ENSMUST00000105636 8426 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.89
Nkx2-3P97334 Prdm16-202ENSMUST00000070313 8429 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.89
Nkx2-3P97334 Gm29113-201ENSMUST00000185991 3432 ntBASIC9.46□□□□□ -0.89
Nkx2-3P97334 Rbbp6-202ENSMUST00000071590 5728 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.89
Nkx2-3P97334 AC168056.3-201ENSMUST00000225395 2540 ntBASIC9.46□□□□□ -0.89
Nkx2-3P97334 Olfr622-204ENSMUST00000216570 2149 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.89
Nkx2-3P97334 Pfkfb1-201ENSMUST00000080884 1739 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Nkx2-3P97334 Fam210a-201ENSMUST00000042852 9651 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Nkx2-3P97334 Trav6-2-201ENSMUST00000103573 338 ntAPPRIS ALT2 BASIC9.46□□□□□ -0.9
Nkx2-3P97334 Gm26416-201ENSMUST00000104280 134 ntBASIC9.46□□□□□ -0.9
Nkx2-3P97334 Gm13486-201ENSMUST00000119910 282 ntBASIC9.46□□□□□ -0.9
Nkx2-3P97334 Gm11407-201ENSMUST00000120362 1058 ntBASIC9.46□□□□□ -0.9
Nkx2-3P97334 Gm14800-201ENSMUST00000122084 1272 ntBASIC9.46□□□□□ -0.9
Nkx2-3P97334 Gm14353-201ENSMUST00000122200 869 ntBASIC9.46□□□□□ -0.9
Nkx2-3P97334 Cyp3a25-202ENSMUST00000138870 513 ntTSL 3 BASIC9.46□□□□□ -0.9
Nkx2-3P97334 Gm14097-201ENSMUST00000147868 470 ntTSL 3 BASIC9.46□□□□□ -0.9
Nkx2-3P97334 1700021L23Rik-201ENSMUST00000153719 726 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Nkx2-3P97334 Gm17198-201ENSMUST00000171792 1154 ntBASIC9.46□□□□□ -0.9
Nkx2-3P97334 Gm3611-201ENSMUST00000173687 877 ntBASIC9.46□□□□□ -0.9
Nkx2-3P97334 Cyp2c53-ps-201ENSMUST00000175649 897 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Nkx2-3P97334 Trav6d-5-201ENSMUST00000180687 338 ntAPPRIS P1 BASIC9.46□□□□□ -0.9
Nkx2-3P97334 6720483E21Rik-201ENSMUST00000181654 1120 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Nkx2-3P97334 Gm27315-201ENSMUST00000183977 154 ntBASIC9.46□□□□□ -0.9
Nkx2-3P97334 Gm38373-201ENSMUST00000192042 288 ntBASIC9.46□□□□□ -0.9
Nkx2-3P97334 Gm43476-201ENSMUST00000197873 405 ntBASIC9.46□□□□□ -0.9
Nkx2-3P97334 Gm4585-201ENSMUST00000207218 452 ntBASIC9.46□□□□□ -0.9
Nkx2-3P97334 Gm44993-201ENSMUST00000208435 842 ntTSL 3 BASIC9.46□□□□□ -0.9
Nkx2-3P97334 Olfr878-202ENSMUST00000212878 1064 ntAPPRIS P1 BASIC9.46□□□□□ -0.9
Nkx2-3P97334 AC172194.1-201ENSMUST00000214246 1020 ntTSL 5 BASIC9.46□□□□□ -0.9
Nkx2-3P97334 1700021G15Rik-201ENSMUST00000217671 528 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Nkx2-3P97334 Gm19217-201ENSMUST00000218238 328 ntBASIC9.46□□□□□ -0.9
Nkx2-3P97334 Pah-204ENSMUST00000219813 789 ntTSL 3 BASIC9.46□□□□□ -0.9
Nkx2-3P97334 AC153975.1-201ENSMUST00000220087 926 ntBASIC9.46□□□□□ -0.9
Nkx2-3P97334 AC126554.4-201ENSMUST00000221055 409 ntBASIC9.46□□□□□ -0.9
Nkx2-3P97334 AC133958.1-201ENSMUST00000227085 961 ntBASIC9.46□□□□□ -0.9
Nkx2-3P97334 Anxa13-202ENSMUST00000227274 1201 ntBASIC9.46□□□□□ -0.9
Nkx2-3P97334 Olfr1342-201ENSMUST00000060562 1002 ntAPPRIS P1 BASIC9.46□□□□□ -0.9
Nkx2-3P97334 Olfr1507-201ENSMUST00000073571 1112 ntAPPRIS P1 BASIC9.46□□□□□ -0.9
Nkx2-3P97334 Gm22043-201ENSMUST00000082993 158 ntBASIC9.46□□□□□ -0.9
Nkx2-3P97334 Gm22578-201ENSMUST00000083730 107 ntBASIC9.46□□□□□ -0.9
Nkx2-3P97334 Gm22864-201ENSMUST00000083950 130 ntBASIC9.46□□□□□ -0.9
Nkx2-3P97334 Cxcr4-201ENSMUST00000052172 1805 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Nkx2-3P97334 Celf1-208ENSMUST00000111455 7579 ntAPPRIS P4 TSL 5 BASIC9.46□□□□□ -0.9
Nkx2-3P97334 Dysf-203ENSMUST00000113818 6571 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.9
Nkx2-3P97334 Ncoa6-202ENSMUST00000109669 2379 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.9
Nkx2-3P97334 Gm37535-201ENSMUST00000194442 2365 ntBASIC9.46□□□□□ -0.9
Nkx2-3P97334 Glrx-201ENSMUST00000022082 1345 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Nkx2-3P97334 Olfr1272-202ENSMUST00000117141 2442 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.9
Nkx2-3P97334 Tmem30c-201ENSMUST00000023434 2973 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.9
Nkx2-3P97334 AC155710.1-201ENSMUST00000219913 1353 ntBASIC9.46□□□□□ -0.9
Nkx2-3P97334 Svep1-201ENSMUST00000042850 11629 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Nkx2-3P97334 Rgs19-206ENSMUST00000108778 1427 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Nkx2-3P97334 Rgs19-212ENSMUST00000165416 1427 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Nkx2-3P97334 Aff1-202ENSMUST00000054979 8323 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.9
Nkx2-3P97334 Gimap6-202ENSMUST00000119315 3179 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Nkx2-3P97334 Erc2-205ENSMUST00000210135 6233 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Nkx2-3P97334 Aff1-201ENSMUST00000031256 8312 ntAPPRIS P4 TSL 5 BASIC9.45□□□□□ -0.9
Nkx2-3P97334 Olfr1394-202ENSMUST00000216273 3024 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
Nkx2-3P97334 Spag11b-202ENSMUST00000110767 1740 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Nkx2-3P97334 Gm16427-202ENSMUST00000200745 1749 ntAPPRIS P5 TSL 2 BASIC9.45□□□□□ -0.9
Nkx2-3P97334 Bmx-201ENSMUST00000112263 2433 ntAPPRIS ALT2 TSL 5 BASIC9.45□□□□□ -0.9
Nkx2-3P97334 Ttc37-201ENSMUST00000091466 5381 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
Nkx2-3P97334 Fam168a-205ENSMUST00000207875 4077 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Nkx2-3P97334 Usp8-201ENSMUST00000028841 4145 ntAPPRIS P3 TSL 1 (best) BASIC9.45□□□□□ -0.9
Nkx2-3P97334 Cep70-201ENSMUST00000093795 2606 ntAPPRIS P2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Nkx2-3P97334 Dpcr1-201ENSMUST00000095467 2611 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Nkx2-3P97334 9930022D16Rik-201ENSMUST00000055404 2706 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Nkx2-3P97334 BC048644-201ENSMUST00000140928 3522 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Nkx2-3P97334 Ahi1-202ENSMUST00000163505 2067 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Nkx2-3P97334 Gm25344-201ENSMUST00000104503 132 ntBASIC9.45□□□□□ -0.9
Nkx2-3P97334 Vmn1r-ps123-201ENSMUST00000110449 237 ntBASIC9.45□□□□□ -0.9
Nkx2-3P97334 Trappc2-201ENSMUST00000112192 1294 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Nkx2-3P97334 Gm23429-201ENSMUST00000122486 149 ntBASIC9.45□□□□□ -0.9
Nkx2-3P97334 Gm14135-201ENSMUST00000135438 591 ntTSL 3 BASIC9.45□□□□□ -0.9
Nkx2-3P97334 Gm12027-201ENSMUST00000146531 949 ntTSL 5 BASIC9.45□□□□□ -0.9
Nkx2-3P97334 Gm22728-201ENSMUST00000158087 129 ntBASIC9.45□□□□□ -0.9
Nkx2-3P97334 Gm23385-201ENSMUST00000158592 295 ntBASIC9.45□□□□□ -0.9
Nkx2-3P97334 Gm24680-201ENSMUST00000158759 126 ntBASIC9.45□□□□□ -0.9
Nkx2-3P97334 Atxn3-205ENSMUST00000161011 1000 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Nkx2-3P97334 Gm42421-201ENSMUST00000172367 719 ntAPPRIS P1 TSL 3 BASIC9.45□□□□□ -0.9
Nkx2-3P97334 Olfr306-ps1-201ENSMUST00000174677 743 ntBASIC9.45□□□□□ -0.9
Nkx2-3P97334 Mir3085-201ENSMUST00000175493 89 ntBASIC9.45□□□□□ -0.9
Nkx2-3P97334 Gm22392-201ENSMUST00000177971 107 ntBASIC9.45□□□□□ -0.9
Nkx2-3P97334 Gm29184-201ENSMUST00000190038 334 ntBASIC9.45□□□□□ -0.9
Nkx2-3P97334 Gm17965-201ENSMUST00000193904 517 ntBASIC9.45□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 116.4 ms