Protein–RNA interactions for Protein: P70362

Ufd1, Ubiquitin recognition factor in ER-associated degradation protein 1, mousemouse

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ufd1P70362 Kif9-203ENSMUST00000197248 3184 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Ufd1P70362 AC153143.2-201ENSMUST00000220999 1804 ntBASIC5.83□□□□□ -1.48
Ufd1P70362 Rnase4-202ENSMUST00000169895 1460 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Ufd1P70362 Gm17017-201ENSMUST00000161540 2405 ntTSL 5 BASIC5.83□□□□□ -1.48
Ufd1P70362 Xpo7-203ENSMUST00000226448 3663 ntBASIC5.83□□□□□ -1.48
Ufd1P70362 Vmn1r50-202ENSMUST00000089417 2059 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
Ufd1P70362 A2m-201ENSMUST00000032203 4605 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Ufd1P70362 Ube2u-201ENSMUST00000092730 1435 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Ufd1P70362 Xrn1-201ENSMUST00000034981 5499 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
Ufd1P70362 Pkn2-210ENSMUST00000174422 2904 ntTSL 5 BASIC5.82□□□□□ -1.48
Ufd1P70362 4921534H16Rik-201ENSMUST00000162370 1392 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Ufd1P70362 Olfr1294-202ENSMUST00000208675 1983 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
Ufd1P70362 Atp13a5-203ENSMUST00000143373 3789 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
Ufd1P70362 Gm43469-201ENSMUST00000196084 4634 ntBASIC5.82□□□□□ -1.48
Ufd1P70362 Crispld1-202ENSMUST00000159958 3117 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Ufd1P70362 Il15ra-210ENSMUST00000128156 1624 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Ufd1P70362 Gm42892-201ENSMUST00000196227 3973 ntBASIC5.82□□□□□ -1.48
Ufd1P70362 Zan-201ENSMUST00000117564 16481 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Ufd1P70362 Gm2108-201ENSMUST00000165058 2177 ntBASIC5.82□□□□□ -1.48
Ufd1P70362 Zfp930-204ENSMUST00000212681 3001 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
Ufd1P70362 Pola1-201ENSMUST00000006856 5346 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Ufd1P70362 Arhgef9-203ENSMUST00000113878 5012 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
Ufd1P70362 Gm43526-201ENSMUST00000196666 1565 ntBASIC5.82□□□□□ -1.48
Ufd1P70362 Pias1-201ENSMUST00000098651 5564 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Ufd1P70362 Gm24462-201ENSMUST00000102430 106 ntBASIC5.82□□□□□ -1.48
Ufd1P70362 Clec4n-202ENSMUST00000112554 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
Ufd1P70362 Gm13858-201ENSMUST00000118862 671 ntBASIC5.82□□□□□ -1.48
Ufd1P70362 Gm13521-201ENSMUST00000118922 866 ntBASIC5.82□□□□□ -1.48
Ufd1P70362 Gm12583-201ENSMUST00000120677 853 ntBASIC5.82□□□□□ -1.48
Ufd1P70362 Snrp1c-ps2-201ENSMUST00000120976 365 ntBASIC5.82□□□□□ -1.48
Ufd1P70362 AA623943-201ENSMUST00000121794 354 ntBASIC5.82□□□□□ -1.48
Ufd1P70362 Gm15347-201ENSMUST00000145372 385 ntTSL 3 BASIC5.82□□□□□ -1.48
Ufd1P70362 4930551O13Rik-201ENSMUST00000145585 1065 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Ufd1P70362 Gm13179-202ENSMUST00000151994 978 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Ufd1P70362 Gm25505-201ENSMUST00000157220 246 ntBASIC5.82□□□□□ -1.48
Ufd1P70362 Gm26408-201ENSMUST00000157672 127 ntBASIC5.82□□□□□ -1.48
Ufd1P70362 Gm22388-201ENSMUST00000158194 248 ntBASIC5.82□□□□□ -1.48
Ufd1P70362 Gm23617-201ENSMUST00000175410 95 ntBASIC5.82□□□□□ -1.48
Ufd1P70362 Gm26801-201ENSMUST00000180591 1219 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Ufd1P70362 4930467D21Rik-202ENSMUST00000181724 570 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Ufd1P70362 Gm20587-201ENSMUST00000186367 1186 ntBASIC5.82□□□□□ -1.48
Ufd1P70362 Gm8870-201ENSMUST00000188170 775 ntBASIC5.82□□□□□ -1.48
Ufd1P70362 Gm28953-201ENSMUST00000188336 697 ntBASIC5.82□□□□□ -1.48
Ufd1P70362 Gm37867-201ENSMUST00000192066 1059 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Ufd1P70362 Olfr737-ps1-201ENSMUST00000205382 283 ntBASIC5.82□□□□□ -1.48
Ufd1P70362 Cyb5r2-202ENSMUST00000208217 1178 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
Ufd1P70362 Gm45446-201ENSMUST00000209348 216 ntBASIC5.82□□□□□ -1.48
Ufd1P70362 AL713985.1-201ENSMUST00000219030 420 ntBASIC5.82□□□□□ -1.48
Ufd1P70362 AC079680.1-202ENSMUST00000219835 654 ntTSL 5 BASIC5.82□□□□□ -1.48
Ufd1P70362 AL645704.1-201ENSMUST00000221642 604 ntBASIC5.82□□□□□ -1.48
Ufd1P70362 Gm4804-203ENSMUST00000222542 577 ntTSL 3 BASIC5.82□□□□□ -1.48
Ufd1P70362 AC113269.1-201ENSMUST00000227185 674 ntBASIC5.82□□□□□ -1.48
Ufd1P70362 AC138765.3-201ENSMUST00000227981 423 ntBASIC5.82□□□□□ -1.48
Ufd1P70362 Clec4n-201ENSMUST00000024118 1229 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
Ufd1P70362 Mphosph6-201ENSMUST00000034303 1068 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Ufd1P70362 Aamdc-201ENSMUST00000042627 627 ntTSL 3 BASIC5.82□□□□□ -1.48
Ufd1P70362 Klk4-201ENSMUST00000007161 1249 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Ufd1P70362 Gm5407-201ENSMUST00000080694 747 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
Ufd1P70362 Gm7275-201ENSMUST00000088296 744 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
Ufd1P70362 Vmn1r198-201ENSMUST00000091733 903 ntAPPRIS P2 BASIC5.82□□□□□ -1.48
Ufd1P70362 Olfr1106-201ENSMUST00000099867 939 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
Ufd1P70362 Nfatc3-206ENSMUST00000212742 3207 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
Ufd1P70362 Csde1-214ENSMUST00000199240 3457 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Ufd1P70362 Ktn1-223ENSMUST00000190999 4031 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
Ufd1P70362 Olfr591-202ENSMUST00000216581 4802 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Ufd1P70362 Siae-202ENSMUST00000213126 2306 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
Ufd1P70362 Olfr532-203ENSMUST00000213801 4232 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Ufd1P70362 Eif2s3x-201ENSMUST00000050328 3647 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Ufd1P70362 Zbtb37-206ENSMUST00000172044 3883 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Ufd1P70362 AL450321.1-201ENSMUST00000220600 3550 ntBASIC5.82□□□□□ -1.48
Ufd1P70362 Olfr558-201ENSMUST00000094124 3041 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Ufd1P70362 Cdh17-202ENSMUST00000108303 3287 ntTSL 2 BASIC5.82□□□□□ -1.48
Ufd1P70362 Nedd4-207ENSMUST00000184333 4034 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Ufd1P70362 Gm43176-201ENSMUST00000199653 2989 ntBASIC5.82□□□□□ -1.48
Ufd1P70362 Olfr720-202ENSMUST00000206298 4437 ntAPPRIS P1 TSL 3 BASIC5.81□□□□□ -1.48
Ufd1P70362 Lig4-202ENSMUST00000170033 3105 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Ufd1P70362 Gm28874-201ENSMUST00000190917 3134 ntBASIC5.81□□□□□ -1.48
Ufd1P70362 AC154682.1-201ENSMUST00000225871 3124 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Ufd1P70362 Mgam-206ENSMUST00000202779 3821 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Ufd1P70362 Zim1-202ENSMUST00000122432 3060 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Ufd1P70362 C630031E19Rik-201ENSMUST00000218114 3059 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Ufd1P70362 Cdk14-204ENSMUST00000115452 1567 ntTSL 5 BASIC5.81□□□□□ -1.48
Ufd1P70362 Vmn1r6-206ENSMUST00000227847 8073 ntAPPRIS P2 BASIC5.81□□□□□ -1.48
Ufd1P70362 Gm29601-201ENSMUST00000187961 1349 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Ufd1P70362 Gm8836-201ENSMUST00000198196 1348 ntBASIC5.81□□□□□ -1.48
Ufd1P70362 Lyz2-201ENSMUST00000092163 1316 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Ufd1P70362 Gm7562-201ENSMUST00000210502 2537 ntBASIC5.81□□□□□ -1.48
Ufd1P70362 Nsa2-201ENSMUST00000073456 2700 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Ufd1P70362 Gm18066-201ENSMUST00000210904 1774 ntBASIC5.81□□□□□ -1.48
Ufd1P70362 Thap6-201ENSMUST00000191860 3151 ntBASIC5.81□□□□□ -1.48
Ufd1P70362 Ccdc146-202ENSMUST00000115245 3389 ntAPPRIS P2 TSL 5 BASIC5.81□□□□□ -1.48
Ufd1P70362 Gm23323-201ENSMUST00000104471 133 ntBASIC5.81□□□□□ -1.48
Ufd1P70362 4930578G10Rik-202ENSMUST00000107984 762 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
Ufd1P70362 Polr2j-203ENSMUST00000111129 474 ntTSL 3 BASIC5.81□□□□□ -1.48
Ufd1P70362 Defa-ps7-201ENSMUST00000117139 168 ntBASIC5.81□□□□□ -1.48
Ufd1P70362 Mgst1-202ENSMUST00000118091 1030 ntTSL 2 BASIC5.81□□□□□ -1.48
Ufd1P70362 Mgst1-203ENSMUST00000120230 1027 ntAPPRIS P1 TSL 3 BASIC5.81□□□□□ -1.48
Ufd1P70362 Gm15527-202ENSMUST00000144094 770 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Ufd1P70362 Gm12600-201ENSMUST00000146704 708 ntTSL 3 BASIC5.81□□□□□ -1.48
Ufd1P70362 Gm12081-201ENSMUST00000152849 501 ntTSL 5 BASIC5.81□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 58.9 ms