Protein–RNA interactions for Protein: P61969

Lmo4, LIM domain transcription factor LMO4, mousemouse

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmo4P61969 Garnl3-201ENSMUST00000049618 3678 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
Lmo4P61969 Olfr798-202ENSMUST00000204979 3590 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
Lmo4P61969 Hepacam2-201ENSMUST00000049985 2328 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Lmo4P61969 CT009480.1-201ENSMUST00000225771 4480 ntBASIC5.6□□□□□ -1.51
Lmo4P61969 Cps1-201ENSMUST00000027144 5555 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Lmo4P61969 Gm43872-201ENSMUST00000203218 2213 ntBASIC5.6□□□□□ -1.51
Lmo4P61969 Gm42577-201ENSMUST00000201367 3211 ntBASIC5.6□□□□□ -1.51
Lmo4P61969 Gm13821-201ENSMUST00000202029 3201 ntBASIC5.6□□□□□ -1.51
Lmo4P61969 Vmn1r196-202ENSMUST00000226245 5312 ntAPPRIS ALT2 BASIC5.6□□□□□ -1.51
Lmo4P61969 Pcyt1a-203ENSMUST00000115137 4244 ntTSL 5 BASIC5.6□□□□□ -1.51
Lmo4P61969 Abcc12-203ENSMUST00000131423 4893 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Lmo4P61969 Gm12695-201ENSMUST00000107071 1904 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Lmo4P61969 Plec-218ENSMUST00000169714 15001 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
Lmo4P61969 Plec-201ENSMUST00000023226 15001 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
Lmo4P61969 Ubxn7-201ENSMUST00000115151 10318 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Lmo4P61969 Gm45949-201ENSMUST00000221550 1895 ntTSL 5 BASIC5.6□□□□□ -1.51
Lmo4P61969 AC162181.1-201ENSMUST00000221643 3728 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Lmo4P61969 E030022I16Rik-201ENSMUST00000215131 2766 ntBASIC5.6□□□□□ -1.51
Lmo4P61969 Meis2-206ENSMUST00000110908 3697 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Lmo4P61969 Olfr293-203ENSMUST00000215280 2683 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Lmo4P61969 Klb-201ENSMUST00000031096 3540 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Lmo4P61969 Eif4e2-202ENSMUST00000076362 3394 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Lmo4P61969 Pcdh17-201ENSMUST00000071370 11451 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Lmo4P61969 Mdc1-201ENSMUST00000082337 7335 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Lmo4P61969 Gm44194-201ENSMUST00000204222 3229 ntBASIC5.59□□□□□ -1.51
Lmo4P61969 Kcnab1-201ENSMUST00000049230 3245 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Lmo4P61969 Tmem87a-203ENSMUST00000110729 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
Lmo4P61969 Plch1-202ENSMUST00000059973 6241 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
Lmo4P61969 Zfp473-202ENSMUST00000118162 3091 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
Lmo4P61969 Osbpl6-202ENSMUST00000111929 8257 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Lmo4P61969 Gm43410-201ENSMUST00000197510 2234 ntBASIC5.59□□□□□ -1.51
Lmo4P61969 Gje1-201ENSMUST00000020016 1480 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Lmo4P61969 AC165260.6-206ENSMUST00000223884 3698 ntBASIC5.59□□□□□ -1.51
Lmo4P61969 Gm29660-201ENSMUST00000185631 2166 ntTSL 5 BASIC5.59□□□□□ -1.51
Lmo4P61969 Gm29309-201ENSMUST00000186251 2166 ntTSL 5 BASIC5.59□□□□□ -1.51
Lmo4P61969 Gm29632-201ENSMUST00000190335 2166 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Lmo4P61969 Gm28538-201ENSMUST00000190919 2166 ntTSL 5 BASIC5.59□□□□□ -1.51
Lmo4P61969 Nek7-203ENSMUST00000187407 4336 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Lmo4P61969 Msantd4-202ENSMUST00000212075 2800 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Lmo4P61969 Wdr44-201ENSMUST00000035766 4167 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Lmo4P61969 Gm44121-201ENSMUST00000205169 2006 ntBASIC5.59□□□□□ -1.51
Lmo4P61969 Vmn1r44-208ENSMUST00000227456 2031 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Lmo4P61969 Gm44669-201ENSMUST00000207774 1969 ntBASIC5.59□□□□□ -1.51
Lmo4P61969 Slc22a19-201ENSMUST00000025666 1998 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Lmo4P61969 Clasp1-203ENSMUST00000165223 7207 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
Lmo4P61969 Nsd2-203ENSMUST00000075812 7142 ntAPPRIS P4 TSL 5 BASIC5.59□□□□□ -1.51
Lmo4P61969 Gm23748-201ENSMUST00000104227 131 ntBASIC5.59□□□□□ -1.51
Lmo4P61969 Gstm6-203ENSMUST00000106683 745 ntTSL 3 BASIC5.59□□□□□ -1.51
Lmo4P61969 Gm12842-201ENSMUST00000117298 476 ntBASIC5.59□□□□□ -1.51
Lmo4P61969 Gm13006-201ENSMUST00000118683 214 ntBASIC5.59□□□□□ -1.51
Lmo4P61969 Gm12135-201ENSMUST00000119170 466 ntBASIC5.59□□□□□ -1.51
Lmo4P61969 Gm8312-201ENSMUST00000119380 618 ntBASIC5.59□□□□□ -1.51
Lmo4P61969 Vmn1r207-ps-201ENSMUST00000119931 1073 ntBASIC5.59□□□□□ -1.51
Lmo4P61969 Gm15164-201ENSMUST00000122203 271 ntBASIC5.59□□□□□ -1.51
Lmo4P61969 Ndufb5-203ENSMUST00000122290 625 ntTSL 2 BASIC5.59□□□□□ -1.51
Lmo4P61969 Gm13669-201ENSMUST00000122366 457 ntBASIC5.59□□□□□ -1.51
Lmo4P61969 Mir1900-201ENSMUST00000122714 78 ntBASIC5.59□□□□□ -1.51
Lmo4P61969 Gm16249-201ENSMUST00000124055 1258 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Lmo4P61969 Gm16248-201ENSMUST00000124238 243 ntBASIC5.59□□□□□ -1.51
Lmo4P61969 Gm23740-201ENSMUST00000157385 100 ntBASIC5.59□□□□□ -1.51
Lmo4P61969 Gm25722-201ENSMUST00000157498 279 ntBASIC5.59□□□□□ -1.51
Lmo4P61969 Tnfsf10-202ENSMUST00000174840 989 ntTSL 5 BASIC5.59□□□□□ -1.51
Lmo4P61969 Gm24369-201ENSMUST00000175387 96 ntBASIC5.59□□□□□ -1.51
Lmo4P61969 Gm5930-202ENSMUST00000178002 489 ntTSL 5 BASIC5.59□□□□□ -1.51
Lmo4P61969 Scgb2b19-201ENSMUST00000179688 520 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Lmo4P61969 Scgb2b12-201ENSMUST00000183195 511 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
Lmo4P61969 Gm29337-201ENSMUST00000185425 284 ntTSL 3 BASIC5.59□□□□□ -1.51
Lmo4P61969 Gm29663-201ENSMUST00000186962 853 ntBASIC5.59□□□□□ -1.51
Lmo4P61969 1810041H14Rik-202ENSMUST00000187218 434 ntTSL 3 BASIC5.59□□□□□ -1.51
Lmo4P61969 Gm29464-201ENSMUST00000187692 513 ntBASIC5.59□□□□□ -1.51
Lmo4P61969 Gm37349-201ENSMUST00000194205 624 ntBASIC5.59□□□□□ -1.51
Lmo4P61969 Gm6077-201ENSMUST00000196008 499 ntBASIC5.59□□□□□ -1.51
Lmo4P61969 Gm42443-201ENSMUST00000198084 1155 ntBASIC5.59□□□□□ -1.51
Lmo4P61969 Gm45574-201ENSMUST00000210921 331 ntBASIC5.59□□□□□ -1.51
Lmo4P61969 Gm17950-201ENSMUST00000214617 646 ntBASIC5.59□□□□□ -1.51
Lmo4P61969 AL929555.1-201ENSMUST00000215283 509 ntBASIC5.59□□□□□ -1.51
Lmo4P61969 AC164881.1-201ENSMUST00000215648 664 ntTSL 3 BASIC5.59□□□□□ -1.51
Lmo4P61969 Olfr108-202ENSMUST00000218675 1038 ntAPPRIS P2 BASIC5.59□□□□□ -1.51
Lmo4P61969 AC124601.1-201ENSMUST00000220531 135 ntBASIC5.59□□□□□ -1.51
Lmo4P61969 AC107663.1-201ENSMUST00000224257 468 ntBASIC5.59□□□□□ -1.51
Lmo4P61969 Ear14-202ENSMUST00000228064 948 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Lmo4P61969 Emc2-201ENSMUST00000022962 1231 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Lmo4P61969 Lalba-201ENSMUST00000023726 771 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Lmo4P61969 Il20-201ENSMUST00000027673 1186 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Lmo4P61969 Dpm2-201ENSMUST00000028151 869 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Lmo4P61969 Gsta4-201ENSMUST00000034903 977 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Lmo4P61969 Krtap13-1-201ENSMUST00000060494 748 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Lmo4P61969 Fpr2-201ENSMUST00000064068 1133 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Lmo4P61969 Olfr933-201ENSMUST00000075680 1003 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Lmo4P61969 Olfr108-201ENSMUST00000078207 1038 ntAPPRIS ALT2 BASIC5.59□□□□□ -1.51
Lmo4P61969 Vmn1r188-201ENSMUST00000091739 927 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Lmo4P61969 Vps13a-201ENSMUST00000068156 10838 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
Lmo4P61969 Trmt2b-203ENSMUST00000113252 3128 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Lmo4P61969 Gm14615-201ENSMUST00000117575 1816 ntBASIC5.59□□□□□ -1.51
Lmo4P61969 Gm37022-201ENSMUST00000192517 2254 ntBASIC5.59□□□□□ -1.51
Lmo4P61969 Slmap-204ENSMUST00000112330 3962 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
Lmo4P61969 Scn3a-201ENSMUST00000066432 9560 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Lmo4P61969 Gm43128-201ENSMUST00000202212 1621 ntBASIC5.59□□□□□ -1.52
Lmo4P61969 Vmn1r44-206ENSMUST00000226760 2070 ntAPPRIS P1 BASIC5.59□□□□□ -1.52
Lmo4P61969 Gm37653-201ENSMUST00000195401 3578 ntBASIC5.59□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 62.8 ms