Protein–RNA interactions for Protein: P59240

Nphp4, Nephrocystin-4, mousemouse

Predictions only

Length 1,425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nphp4P59240 Gm11107-201ENSMUST00000165414 505 ntBASIC9.28□□□□□ -0.92
Nphp4P59240 n-R5s109-201ENSMUST00000179195 119 ntBASIC9.28□□□□□ -0.92
Nphp4P59240 Cd68-201ENSMUST00000018918 1230 ntAPPRIS P2 TSL 1 (best) BASIC9.28□□□□□ -0.92
Nphp4P59240 Fxyd4-207ENSMUST00000204214 550 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Nphp4P59240 Olfr565-ps1-201ENSMUST00000209824 944 ntBASIC9.28□□□□□ -0.92
Nphp4P59240 Gm2788-207ENSMUST00000211055 1078 ntTSL 5 BASIC9.28□□□□□ -0.92
Nphp4P59240 CT030645.2-201ENSMUST00000224321 1012 ntBASIC9.28□□□□□ -0.92
Nphp4P59240 Olfr275-201ENSMUST00000095085 960 ntAPPRIS P1 BASIC9.28□□□□□ -0.92
Nphp4P59240 Tubgcp6-202ENSMUST00000109353 7635 ntAPPRIS P2 TSL 5 BASIC9.28□□□□□ -0.92
Nphp4P59240 Myo1e-201ENSMUST00000034745 4625 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Nphp4P59240 Irgm1-201ENSMUST00000049519 2259 ntAPPRIS P2 TSL 1 (best) BASIC9.28□□□□□ -0.92
Nphp4P59240 Rreb1-210ENSMUST00000149745 4320 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Nphp4P59240 Vps13b-201ENSMUST00000048646 13757 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
Nphp4P59240 Gm38386-201ENSMUST00000194293 3421 ntBASIC9.28□□□□□ -0.92
Nphp4P59240 Rttn-201ENSMUST00000023828 7268 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
Nphp4P59240 Cyp4a10-202ENSMUST00000094886 2052 ntAPPRIS ALT2 TSL 2 BASIC9.27□□□□□ -0.92
Nphp4P59240 Gm26538-201ENSMUST00000180512 3498 ntTSL 5 BASIC9.27□□□□□ -0.92
Nphp4P59240 Gpr165-201ENSMUST00000033554 3170 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.92
Nphp4P59240 Gm28157-201ENSMUST00000187675 2165 ntTSL 1 (best) BASIC9.27□□□□□ -0.92
Nphp4P59240 Gm29146-201ENSMUST00000188904 2165 ntTSL 1 (best) BASIC9.27□□□□□ -0.92
Nphp4P59240 Gm28772-201ENSMUST00000189554 2165 ntTSL 1 (best) BASIC9.27□□□□□ -0.92
Nphp4P59240 Gm37547-201ENSMUST00000193277 2165 ntTSL 1 (best) BASIC9.27□□□□□ -0.92
Nphp4P59240 Poln-201ENSMUST00000042954 2897 ntAPPRIS P3 TSL 1 (best) BASIC9.27□□□□□ -0.92
Nphp4P59240 Ank3-230ENSMUST00000182795 3557 ntTSL 5 BASIC9.27□□□□□ -0.92
Nphp4P59240 Pik3c2g-215ENSMUST00000218528 2712 ntTSL 5 BASIC9.27□□□□□ -0.93
Nphp4P59240 Vmn2r-ps159-201ENSMUST00000074107 2716 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Nphp4P59240 Vmn1r89-207ENSMUST00000227390 1348 ntAPPRIS ALT2 BASIC9.27□□□□□ -0.93
Nphp4P59240 Sorbs2-215ENSMUST00000135336 6307 ntAPPRIS ALT2 TSL 5 BASIC9.27□□□□□ -0.93
Nphp4P59240 Myo16-202ENSMUST00000207204 6719 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Nphp4P59240 Gm13081-201ENSMUST00000121527 5599 ntBASIC9.27□□□□□ -0.93
Nphp4P59240 Gm37255-201ENSMUST00000193302 3060 ntBASIC9.27□□□□□ -0.93
Nphp4P59240 Uba1y-ps2-201ENSMUST00000190871 2544 ntBASIC9.27□□□□□ -0.93
Nphp4P59240 Deptor-202ENSMUST00000096433 8547 ntAPPRIS P4 TSL 1 (best) BASIC9.27□□□□□ -0.93
Nphp4P59240 Ppargc1a-205ENSMUST00000196968 2754 ntTSL 5 BASIC9.27□□□□□ -0.93
Nphp4P59240 Dlg2-203ENSMUST00000107193 4910 ntAPPRIS ALT2 TSL 5 BASIC9.27□□□□□ -0.93
Nphp4P59240 Gm43285-201ENSMUST00000196563 3592 ntBASIC9.27□□□□□ -0.93
Nphp4P59240 Cyp2j13-201ENSMUST00000030305 4374 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Nphp4P59240 Dnajc5b-203ENSMUST00000118968 806 ntAPPRIS P1 TSL 2 BASIC9.27□□□□□ -0.93
Nphp4P59240 Gm13299-201ENSMUST00000133644 425 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Nphp4P59240 Gm13307-202ENSMUST00000142990 425 ntTSL 5 BASIC9.27□□□□□ -0.93
Nphp4P59240 Gm27010-201ENSMUST00000182727 863 ntTSL 3 BASIC9.27□□□□□ -0.93
Nphp4P59240 Ly6e-206ENSMUST00000187284 654 ntAPPRIS P1 TSL 5 BASIC9.27□□□□□ -0.93
Nphp4P59240 Cfhr2-202ENSMUST00000194186 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.93
Nphp4P59240 Gm7554-201ENSMUST00000202282 574 ntBASIC9.27□□□□□ -0.93
Nphp4P59240 AC153729.3-201ENSMUST00000213319 781 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Nphp4P59240 Gm39329-201ENSMUST00000215849 798 ntTSL 5 BASIC9.27□□□□□ -0.93
Nphp4P59240 Gm10205-201ENSMUST00000087431 234 ntBASIC9.27□□□□□ -0.93
Nphp4P59240 4931406P16Rik-202ENSMUST00000108074 6224 ntAPPRIS P1 TSL 5 BASIC9.27□□□□□ -0.93
Nphp4P59240 Gm31410-201ENSMUST00000217302 4048 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Nphp4P59240 Gm37790-201ENSMUST00000193136 3346 ntBASIC9.27□□□□□ -0.93
Nphp4P59240 Fbxw7-202ENSMUST00000107675 3599 ntAPPRIS ALT1 TSL 5 BASIC9.27□□□□□ -0.93
Nphp4P59240 Helz2-203ENSMUST00000121484 10063 ntTSL 5 BASIC9.27□□□□□ -0.93
Nphp4P59240 Gm18409-201ENSMUST00000218988 2506 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Nphp4P59240 Cfap44-201ENSMUST00000099742 6583 ntAPPRIS P1 TSL 5 BASIC9.27□□□□□ -0.93
Nphp4P59240 Gm37570-201ENSMUST00000195411 3106 ntBASIC9.27□□□□□ -0.93
Nphp4P59240 Gm43876-201ENSMUST00000203831 3229 ntBASIC9.26□□□□□ -0.93
Nphp4P59240 Gm16344-201ENSMUST00000150084 1567 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Nphp4P59240 Gm42568-201ENSMUST00000195639 1841 ntBASIC9.26□□□□□ -0.93
Nphp4P59240 Olfr1320-203ENSMUST00000214375 1831 ntAPPRIS P1 TSL 5 BASIC9.26□□□□□ -0.93
Nphp4P59240 Neto2-203ENSMUST00000209479 4936 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Nphp4P59240 Gm14147-201ENSMUST00000109888 2681 ntAPPRIS P1 TSL 5 BASIC9.26□□□□□ -0.93
Nphp4P59240 Medag-202ENSMUST00000201083 2669 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Nphp4P59240 Gm12292-201ENSMUST00000122911 2433 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Nphp4P59240 Cdc42bpa-218ENSMUST00000212756 5247 ntTSL 5 BASIC9.26□□□□□ -0.93
Nphp4P59240 Gm24709-201ENSMUST00000104123 132 ntBASIC9.26□□□□□ -0.93
Nphp4P59240 n-R5s178-201ENSMUST00000104249 114 ntBASIC9.26□□□□□ -0.93
Nphp4P59240 Rps12-ps10-201ENSMUST00000117447 399 ntBASIC9.26□□□□□ -0.93
Nphp4P59240 Rps12-ps16-201ENSMUST00000118529 399 ntBASIC9.26□□□□□ -0.93
Nphp4P59240 Gm13930-201ENSMUST00000118569 368 ntBASIC9.26□□□□□ -0.93
Nphp4P59240 Gm12140-201ENSMUST00000121214 544 ntBASIC9.26□□□□□ -0.93
Nphp4P59240 Dnah2os-201ENSMUST00000124108 859 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Nphp4P59240 Gm25550-201ENSMUST00000158079 128 ntBASIC9.26□□□□□ -0.93
Nphp4P59240 Gm25904-201ENSMUST00000158491 143 ntBASIC9.26□□□□□ -0.93
Nphp4P59240 Gm16226-203ENSMUST00000161197 395 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Nphp4P59240 Gm6133-201ENSMUST00000164064 948 ntAPPRIS P1 BASIC9.26□□□□□ -0.93
Nphp4P59240 Gm4152-201ENSMUST00000172675 259 ntBASIC9.26□□□□□ -0.93
Nphp4P59240 Rps12-ps13-201ENSMUST00000178365 399 ntBASIC9.26□□□□□ -0.93
Nphp4P59240 Rps12-ps11-201ENSMUST00000178427 399 ntBASIC9.26□□□□□ -0.93
Nphp4P59240 Rps12-ps12-201ENSMUST00000179020 399 ntBASIC9.26□□□□□ -0.93
Nphp4P59240 Rps12-ps17-201ENSMUST00000179067 399 ntBASIC9.26□□□□□ -0.93
Nphp4P59240 Rps12-ps6-201ENSMUST00000179239 399 ntBASIC9.26□□□□□ -0.93
Nphp4P59240 Rps12-ps14-201ENSMUST00000179356 399 ntBASIC9.26□□□□□ -0.93
Nphp4P59240 Rps12-ps18-201ENSMUST00000179420 399 ntBASIC9.26□□□□□ -0.93
Nphp4P59240 Rps12-ps15-201ENSMUST00000179567 399 ntBASIC9.26□□□□□ -0.93
Nphp4P59240 Gm21304-201ENSMUST00000180568 1185 ntAPPRIS P1 TSL 3 BASIC9.26□□□□□ -0.93
Nphp4P59240 Gm21293-202ENSMUST00000180664 1185 ntAPPRIS P1 TSL 3 BASIC9.26□□□□□ -0.93
Nphp4P59240 Gm21312-203ENSMUST00000181239 1185 ntAPPRIS ALT2 TSL 3 BASIC9.26□□□□□ -0.93
Nphp4P59240 Gm20765-203ENSMUST00000181707 1185 ntAPPRIS ALT2 TSL 3 BASIC9.26□□□□□ -0.93
Nphp4P59240 Rps12l1-201ENSMUST00000183090 399 ntBASIC9.26□□□□□ -0.93
Nphp4P59240 1700006H21Rik-201ENSMUST00000188490 627 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Nphp4P59240 Gm6074-201ENSMUST00000193340 451 ntBASIC9.26□□□□□ -0.93
Nphp4P59240 Gm44226-201ENSMUST00000205203 1195 ntTSL 5 BASIC9.26□□□□□ -0.93
Nphp4P59240 Rps12-ps4-201ENSMUST00000208689 397 ntBASIC9.26□□□□□ -0.93
Nphp4P59240 Olfr195-201ENSMUST00000075381 995 ntAPPRIS P1 BASIC9.26□□□□□ -0.93
Nphp4P59240 Vmn1r219-201ENSMUST00000076180 939 ntAPPRIS P1 BASIC9.26□□□□□ -0.93
Nphp4P59240 Eif4a2-203ENSMUST00000115341 1875 ntAPPRIS ALT1 TSL 5 BASIC9.26□□□□□ -0.93
Nphp4P59240 Gdpd4-202ENSMUST00000170049 1899 ntAPPRIS P1 TSL 5 BASIC9.26□□□□□ -0.93
Nphp4P59240 Mpdz-203ENSMUST00000107262 7518 ntAPPRIS ALT2 TSL 5 BASIC9.26□□□□□ -0.93
Nphp4P59240 Pfkfb3-206ENSMUST00000114846 4634 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Nphp4P59240 Gm232-201ENSMUST00000216549 2559 ntBASIC9.26□□□□□ -0.93
Retrieved 100 of 76,532 protein–RNA pairs in 58.7 ms