Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 4930449A18Rik-201ENSMUST00000094228 2071 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Tpm1P58771 Ccdc66-201ENSMUST00000050480 2457 ntAPPRIS ALT2 TSL 1 (best) BASIC7.56□□□□□ -1.2
Tpm1P58771 Olfr1106-202ENSMUST00000213781 2569 ntAPPRIS P1 TSL 5 BASIC7.56□□□□□ -1.2
Tpm1P58771 Olfr1106-203ENSMUST00000217650 2573 ntAPPRIS P1 TSL 5 BASIC7.56□□□□□ -1.2
Tpm1P58771 Ccp110-201ENSMUST00000038650 4716 ntAPPRIS P1 TSL 5 BASIC7.56□□□□□ -1.2
Tpm1P58771 Gm12292-201ENSMUST00000122911 2433 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Tpm1P58771 Mtus1-205ENSMUST00000118835 6426 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Tpm1P58771 Vmn1r77-202ENSMUST00000226525 8252 ntAPPRIS ALT2 BASIC7.55□□□□□ -1.2
Tpm1P58771 Vmn1r8-202ENSMUST00000227706 1563 ntAPPRIS P1 BASIC7.55□□□□□ -1.2
Tpm1P58771 Inpp4b-202ENSMUST00000109851 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC7.55□□□□□ -1.2
Tpm1P58771 RMST_1.1-210ENSMUST00000219606 2891 ntTSL 5 BASIC7.55□□□□□ -1.2
Tpm1P58771 Plekhg1-201ENSMUST00000042438 7190 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Tpm1P58771 Crispld1-202ENSMUST00000159958 3117 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Tpm1P58771 Gm43577-201ENSMUST00000197090 3344 ntBASIC7.55□□□□□ -1.2
Tpm1P58771 Gm15217-201ENSMUST00000111826 733 ntAPPRIS P5 TSL 2 BASIC7.55□□□□□ -1.2
Tpm1P58771 Smim24-202ENSMUST00000118206 949 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Tpm1P58771 Gm11558-201ENSMUST00000118454 459 ntBASIC7.55□□□□□ -1.2
Tpm1P58771 Gm15188-201ENSMUST00000121264 704 ntBASIC7.55□□□□□ -1.2
Tpm1P58771 Plxna4os3-202ENSMUST00000143328 277 ntTSL 3 BASIC7.55□□□□□ -1.2
Tpm1P58771 Gm15642-201ENSMUST00000148057 311 ntTSL 5 BASIC7.55□□□□□ -1.2
Tpm1P58771 Mir6919-201ENSMUST00000185146 62 ntBASIC7.55□□□□□ -1.2
Tpm1P58771 Gm28888-201ENSMUST00000186556 316 ntTSL 3 BASIC7.55□□□□□ -1.2
Tpm1P58771 1810026B05Rik-208ENSMUST00000190028 590 ntTSL 3 BASIC7.55□□□□□ -1.2
Tpm1P58771 Gm38079-201ENSMUST00000195603 154 ntBASIC7.55□□□□□ -1.2
Tpm1P58771 Gm30692-201ENSMUST00000208709 801 ntTSL 5 BASIC7.55□□□□□ -1.2
Tpm1P58771 Gm16475-202ENSMUST00000209033 528 ntBASIC7.55□□□□□ -1.2
Tpm1P58771 Gm6213-201ENSMUST00000209966 638 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Tpm1P58771 AC131795.1-201ENSMUST00000219632 426 ntBASIC7.55□□□□□ -1.2
Tpm1P58771 AC158535.1-201ENSMUST00000221487 769 ntTSL 5 BASIC7.55□□□□□ -1.2
Tpm1P58771 Cypt4-201ENSMUST00000053956 629 ntAPPRIS P1 BASIC7.55□□□□□ -1.2
Tpm1P58771 Olfr1510-201ENSMUST00000079459 1014 ntAPPRIS P1 BASIC7.55□□□□□ -1.2
Tpm1P58771 Sry-201ENSMUST00000091178 1188 ntAPPRIS P1 BASIC7.55□□□□□ -1.2
Tpm1P58771 Abcc2-201ENSMUST00000026208 8027 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Tpm1P58771 Kif9-203ENSMUST00000197248 3184 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Tpm1P58771 Il15ra-210ENSMUST00000128156 1624 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Tpm1P58771 Them5-202ENSMUST00000198083 1378 ntTSL 5 BASIC7.55□□□□□ -1.2
Tpm1P58771 Triml1-201ENSMUST00000059692 1850 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Tpm1P58771 Dcun1d4-202ENSMUST00000087181 4117 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Tpm1P58771 Rbms3-205ENSMUST00000111772 2234 ntAPPRIS ALT2 TSL 1 (best) BASIC7.55□□□□□ -1.2
Tpm1P58771 Gm44093-201ENSMUST00000204381 1802 ntBASIC7.55□□□□□ -1.2
Tpm1P58771 Il7r-204ENSMUST00000228782 3516 ntAPPRIS ALT2 BASIC7.55□□□□□ -1.2
Tpm1P58771 AC159006.2-201ENSMUST00000228734 4144 ntBASIC7.54□□□□□ -1.2
Tpm1P58771 Gm28874-201ENSMUST00000190917 3134 ntBASIC7.54□□□□□ -1.2
Tpm1P58771 Ctps2-202ENSMUST00000101095 1665 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
Tpm1P58771 Gm46136-202ENSMUST00000217053 6329 ntTSL 5 BASIC7.54□□□□□ -1.2
Tpm1P58771 Olfr348-204ENSMUST00000215199 3557 ntAPPRIS P1 TSL 3 BASIC7.54□□□□□ -1.2
Tpm1P58771 Bnc2-201ENSMUST00000102820 4133 ntAPPRIS ALT2 TSL 5 BASIC7.54□□□□□ -1.2
Tpm1P58771 Eif4a2-203ENSMUST00000115341 1875 ntAPPRIS ALT1 TSL 5 BASIC7.54□□□□□ -1.2
Tpm1P58771 Gm31822-201ENSMUST00000216096 2572 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
Tpm1P58771 Xrn1-201ENSMUST00000034981 5499 ntAPPRIS P3 TSL 1 (best) BASIC7.54□□□□□ -1.2
Tpm1P58771 Olfr305-202ENSMUST00000213255 3749 ntAPPRIS P1 TSL 5 BASIC7.54□□□□□ -1.2
Tpm1P58771 Fam47c-201ENSMUST00000105110 1639 ntAPPRIS P1 BASIC7.54□□□□□ -1.2
Tpm1P58771 Gm22152-201ENSMUST00000116966 125 ntBASIC7.54□□□□□ -1.2
Tpm1P58771 Gm15484-201ENSMUST00000118871 828 ntBASIC7.54□□□□□ -1.2
Tpm1P58771 Gm15160-201ENSMUST00000120553 907 ntBASIC7.54□□□□□ -1.2
Tpm1P58771 Cd48-201ENSMUST00000015499 922 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
Tpm1P58771 Gm24735-201ENSMUST00000158859 118 ntBASIC7.54□□□□□ -1.2
Tpm1P58771 Rbx1-ps-201ENSMUST00000173786 327 ntBASIC7.54□□□□□ -1.2
Tpm1P58771 Gm29197-201ENSMUST00000185922 702 ntBASIC7.54□□□□□ -1.2
Tpm1P58771 Gm29195-201ENSMUST00000189038 379 ntBASIC7.54□□□□□ -1.2
Tpm1P58771 Gm37678-201ENSMUST00000192908 1146 ntBASIC7.54□□□□□ -1.2
Tpm1P58771 Gm37825-201ENSMUST00000193141 904 ntTSL 5 BASIC7.54□□□□□ -1.2
Tpm1P58771 Gm24826-202ENSMUST00000197298 216 ntBASIC7.54□□□□□ -1.2
Tpm1P58771 Gm18430-201ENSMUST00000197534 682 ntBASIC7.54□□□□□ -1.2
Tpm1P58771 Gm5149-202ENSMUST00000199980 1250 ntTSL 2 BASIC7.54□□□□□ -1.2
Tpm1P58771 Gm6290-201ENSMUST00000207666 1158 ntBASIC7.54□□□□□ -1.2
Tpm1P58771 Gm19228-201ENSMUST00000214030 717 ntBASIC7.54□□□□□ -1.2
Tpm1P58771 Cryab-205ENSMUST00000216755 836 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Tpm1P58771 AC151971.2-201ENSMUST00000217540 909 ntBASIC7.54□□□□□ -1.2
Tpm1P58771 AC166258.1-201ENSMUST00000219823 893 ntTSL 3 BASIC7.54□□□□□ -1.2
Tpm1P58771 CT030166.4-201ENSMUST00000220640 404 ntBASIC7.54□□□□□ -1.2
Tpm1P58771 Cinp-209ENSMUST00000222457 723 ntTSL 2 BASIC7.54□□□□□ -1.2
Tpm1P58771 Zfp874a-208ENSMUST00000225479 1092 ntBASIC7.54□□□□□ -1.2
Tpm1P58771 Gm5528-201ENSMUST00000076314 480 ntBASIC7.54□□□□□ -1.2
Tpm1P58771 Itih2-201ENSMUST00000042290 3100 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Tpm1P58771 Nsun4-206ENSMUST00000165493 3920 ntTSL 2 BASIC7.54□□□□□ -1.2
Tpm1P58771 AC122305.1-201ENSMUST00000214803 3921 ntBASIC7.54□□□□□ -1.2
Tpm1P58771 Gm15731-201ENSMUST00000146887 2195 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
Tpm1P58771 Lef1-203ENSMUST00000098611 2298 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
Tpm1P58771 Tank-205ENSMUST00000112502 2016 ntAPPRIS ALT2 TSL 5 BASIC7.54□□□□□ -1.2
Tpm1P58771 Tank-201ENSMUST00000078074 2018 ntAPPRIS P3 TSL 1 (best) BASIC7.54□□□□□ -1.2
Tpm1P58771 AL450321.1-201ENSMUST00000220600 3550 ntBASIC7.54□□□□□ -1.2
Tpm1P58771 Otc-201ENSMUST00000049910 2319 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Tpm1P58771 Olfr600-202ENSMUST00000215042 3527 ntAPPRIS P1 TSL 5 BASIC7.53□□□□□ -1.2
Tpm1P58771 Depdc1a-202ENSMUST00000106041 1971 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Tpm1P58771 Liph-202ENSMUST00000074230 3703 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Tpm1P58771 Vmn1r181-203ENSMUST00000226978 4371 ntAPPRIS P1 BASIC7.53□□□□□ -1.2
Tpm1P58771 Pcdh15-211ENSMUST00000126920 6866 ntAPPRIS ALT2 TSL 5 BASIC7.53□□□□□ -1.2
Tpm1P58771 AC153143.2-201ENSMUST00000220999 1804 ntBASIC7.53□□□□□ -1.2
Tpm1P58771 Gm40518-202ENSMUST00000214538 4080 ntTSL 5 BASIC7.53□□□□□ -1.2
Tpm1P58771 Mir763-201ENSMUST00000103249 120 ntBASIC7.53□□□□□ -1.2
Tpm1P58771 Gm17170-201ENSMUST00000112785 316 ntBASIC7.53□□□□□ -1.2
Tpm1P58771 Tvp23bos-201ENSMUST00000148598 1011 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Tpm1P58771 Gm13179-202ENSMUST00000151994 978 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Tpm1P58771 Gm25455-201ENSMUST00000157946 325 ntBASIC7.53□□□□□ -1.2
Tpm1P58771 Gm7991-201ENSMUST00000168668 591 ntBASIC7.53□□□□□ -1.2
Tpm1P58771 Gm6536-201ENSMUST00000171180 615 ntBASIC7.53□□□□□ -1.2
Tpm1P58771 Gm8893-201ENSMUST00000172146 1242 ntBASIC7.53□□□□□ -1.2
Tpm1P58771 Gm26662-201ENSMUST00000181129 548 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Tpm1P58771 Gm28941-201ENSMUST00000185536 1017 ntBASIC7.53□□□□□ -1.2
Retrieved 100 of 76,532 protein–RNA pairs in 56 ms