Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Gm39075-201ENSMUST00000206031 512 ntTSL 5 BASIC6.69□□□□□ -1.34
Sox3P53784 Gm45024-201ENSMUST00000208274 623 ntTSL 3 BASIC6.69□□□□□ -1.34
Sox3P53784 Cd209d-202ENSMUST00000209176 672 ntAPPRIS ALT2 TSL 1 (best) BASIC6.69□□□□□ -1.34
Sox3P53784 Gm45782-201ENSMUST00000212670 366 ntBASIC6.69□□□□□ -1.34
Sox3P53784 Gm30853-201ENSMUST00000218367 810 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Sox3P53784 4930563J15Rik-202ENSMUST00000219752 560 ntTSL 3 BASIC6.69□□□□□ -1.34
Sox3P53784 1700011B04Rik-207ENSMUST00000221256 800 ntTSL 5 BASIC6.69□□□□□ -1.34
Sox3P53784 1700011B04Rik-208ENSMUST00000221261 628 ntTSL 5 BASIC6.69□□□□□ -1.34
Sox3P53784 AC132954.2-201ENSMUST00000222400 403 ntBASIC6.69□□□□□ -1.34
Sox3P53784 1700011B04Rik-210ENSMUST00000222668 821 ntTSL 5 BASIC6.69□□□□□ -1.34
Sox3P53784 AC131187.2-201ENSMUST00000223936 994 ntBASIC6.69□□□□□ -1.34
Sox3P53784 AC154642.1-201ENSMUST00000224173 740 ntBASIC6.69□□□□□ -1.34
Sox3P53784 AC110176.1-201ENSMUST00000226219 504 ntBASIC6.69□□□□□ -1.34
Sox3P53784 AC158954.1-201ENSMUST00000228272 1006 ntBASIC6.69□□□□□ -1.34
Sox3P53784 Olfr1386-201ENSMUST00000071905 1128 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
Sox3P53784 Gm7361-201ENSMUST00000074148 2995 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Sox3P53784 Olfr1427-201ENSMUST00000087825 938 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
Sox3P53784 CT010577.1-202ENSMUST00000226187 1903 ntBASIC6.69□□□□□ -1.34
Sox3P53784 Heph-201ENSMUST00000033553 4743 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Sox3P53784 AC115760.1-201ENSMUST00000225160 1327 ntBASIC6.69□□□□□ -1.34
Sox3P53784 AC156645.1-201ENSMUST00000223066 5194 ntBASIC6.69□□□□□ -1.34
Sox3P53784 Olfr452-203ENSMUST00000215719 2728 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
Sox3P53784 Nostrin-201ENSMUST00000041865 1808 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Sox3P53784 Gm35439-201ENSMUST00000200051 4809 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Sox3P53784 Gm12511-201ENSMUST00000135987 1603 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Sox3P53784 Gm1698-201ENSMUST00000136749 2313 ntTSL 2 BASIC6.68□□□□□ -1.34
Sox3P53784 Gm42546-201ENSMUST00000201584 2592 ntBASIC6.68□□□□□ -1.34
Sox3P53784 Gjc3-201ENSMUST00000077119 4002 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Sox3P53784 Sprr2a3-202ENSMUST00000193337 2880 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Sox3P53784 Mef2c-228ENSMUST00000199450 2862 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Sox3P53784 Cep57l1-210ENSMUST00000190022 1949 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Sox3P53784 Cxcr1-202ENSMUST00000190313 1451 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
Sox3P53784 Sirpb1b-201ENSMUST00000091319 1499 ntAPPRIS P2 TSL 1 (best) BASIC6.68□□□□□ -1.34
Sox3P53784 Btn2a2-201ENSMUST00000041541 2226 ntTSL 2 BASIC6.68□□□□□ -1.34
Sox3P53784 Gm4952-201ENSMUST00000092931 2212 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Sox3P53784 Cntn4-206ENSMUST00000113264 5262 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
Sox3P53784 Gm7265-201ENSMUST00000192735 3502 ntBASIC6.68□□□□□ -1.34
Sox3P53784 Gja6-201ENSMUST00000069417 2017 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Sox3P53784 1700007E05Rik-201ENSMUST00000186196 1513 ntBASIC6.68□□□□□ -1.34
Sox3P53784 Igkv1-122-201ENSMUST00000103314 383 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
Sox3P53784 Gm25311-201ENSMUST00000104136 132 ntBASIC6.68□□□□□ -1.34
Sox3P53784 Gm15048-201ENSMUST00000118201 954 ntBASIC6.68□□□□□ -1.34
Sox3P53784 Gm14727-201ENSMUST00000118526 525 ntBASIC6.68□□□□□ -1.34
Sox3P53784 Gm14721-201ENSMUST00000121381 525 ntBASIC6.68□□□□□ -1.34
Sox3P53784 Gm15164-201ENSMUST00000122203 271 ntBASIC6.68□□□□□ -1.34
Sox3P53784 Gm12833-201ENSMUST00000136112 477 ntBASIC6.68□□□□□ -1.34
Sox3P53784 Gm14022-201ENSMUST00000143857 691 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Sox3P53784 G930045G22Rik-202ENSMUST00000161723 673 ntTSL 3 BASIC6.68□□□□□ -1.34
Sox3P53784 Gm3208-201ENSMUST00000168281 427 ntBASIC6.68□□□□□ -1.34
Sox3P53784 1700122D07Rik-201ENSMUST00000186973 421 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Sox3P53784 Gm28556-201ENSMUST00000187489 673 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Sox3P53784 Gm37072-201ENSMUST00000194570 837 ntBASIC6.68□□□□□ -1.34
Sox3P53784 Gm43656-201ENSMUST00000197882 434 ntBASIC6.68□□□□□ -1.34
Sox3P53784 Gm34583-203ENSMUST00000202586 454 ntBASIC6.68□□□□□ -1.34
Sox3P53784 4930518I17Rik-201ENSMUST00000203902 656 ntBASIC6.68□□□□□ -1.34
Sox3P53784 Gm44091-201ENSMUST00000205212 649 ntBASIC6.68□□□□□ -1.34
Sox3P53784 Tgm4-206ENSMUST00000215247 951 ntTSL 2 BASIC6.68□□□□□ -1.34
Sox3P53784 AC124184.1-201ENSMUST00000218167 283 ntBASIC6.68□□□□□ -1.34
Sox3P53784 AC192091.1-201ENSMUST00000218668 439 ntBASIC6.68□□□□□ -1.34
Sox3P53784 AV026068-229ENSMUST00000225516 595 ntBASIC6.68□□□□□ -1.34
Sox3P53784 AC151730.1-201ENSMUST00000226106 448 ntBASIC6.68□□□□□ -1.34
Sox3P53784 AC123917.1-201ENSMUST00000228063 1048 ntBASIC6.68□□□□□ -1.34
Sox3P53784 AC135086.1-201ENSMUST00000228621 817 ntBASIC6.68□□□□□ -1.34
Sox3P53784 Olfr90-203ENSMUST00000215195 3060 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
Sox3P53784 Vmn2r15-201ENSMUST00000167133 2568 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
Sox3P53784 BC028471-203ENSMUST00000202022 4113 ntTSL 2 BASIC6.68□□□□□ -1.34
Sox3P53784 Lrrc6-201ENSMUST00000023006 2084 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Sox3P53784 Elovl6-201ENSMUST00000071402 5951 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Sox3P53784 Slc15a1-201ENSMUST00000088386 3121 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Sox3P53784 Gm6640-201ENSMUST00000120629 1587 ntBASIC6.68□□□□□ -1.34
Sox3P53784 Tmem167-203ENSMUST00000161568 8689 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Sox3P53784 Itga1-201ENSMUST00000061673 10967 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Sox3P53784 Olfr1418-202ENSMUST00000214796 4046 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
Sox3P53784 Dnah10-201ENSMUST00000058440 14038 ntAPPRIS P2 TSL 5 BASIC6.68□□□□□ -1.34
Sox3P53784 Prkacb-203ENSMUST00000106137 4061 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Sox3P53784 Zfp263-207ENSMUST00000162207 2452 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Sox3P53784 4921534H16Rik-201ENSMUST00000162370 1392 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Sox3P53784 5830432E09Rik-201ENSMUST00000180693 3569 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Sox3P53784 4833413G10Rik-201ENSMUST00000199632 1946 ntBASIC6.68□□□□□ -1.34
Sox3P53784 Fam107a-203ENSMUST00000121887 3333 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Sox3P53784 Abca17-202ENSMUST00000121226 5317 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
Sox3P53784 AC132465.2-201ENSMUST00000218673 2728 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Sox3P53784 Stab2-201ENSMUST00000035288 8228 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Sox3P53784 Cyp4a30b-201ENSMUST00000119958 1527 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
Sox3P53784 Evi5-201ENSMUST00000112642 5849 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Sox3P53784 Ube4a-204ENSMUST00000138559 3374 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Sox3P53784 Rlim-201ENSMUST00000070705 7429 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Sox3P53784 Tcf4-202ENSMUST00000078486 7147 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
Sox3P53784 Gm23748-201ENSMUST00000104227 131 ntBASIC6.67□□□□□ -1.34
Sox3P53784 Klhl10-202ENSMUST00000107395 932 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Sox3P53784 4930578G10Rik-202ENSMUST00000107984 762 ntAPPRIS P1 TSL 2 BASIC6.67□□□□□ -1.34
Sox3P53784 Ppp1r1c-203ENSMUST00000111780 708 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Sox3P53784 Gm12439-201ENSMUST00000117162 365 ntBASIC6.67□□□□□ -1.34
Sox3P53784 Rps12-ps10-201ENSMUST00000117447 399 ntBASIC6.67□□□□□ -1.34
Sox3P53784 Rps12-ps16-201ENSMUST00000118529 399 ntBASIC6.67□□□□□ -1.34
Sox3P53784 Gm16056-201ENSMUST00000119293 135 ntBASIC6.67□□□□□ -1.34
Sox3P53784 Gm7189-201ENSMUST00000119811 429 ntBASIC6.67□□□□□ -1.34
Sox3P53784 Tctex1d1-203ENSMUST00000125417 859 ntAPPRIS ALT2 TSL 5 BASIC6.67□□□□□ -1.34
Sox3P53784 Prlr-204ENSMUST00000128450 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
Sox3P53784 Gm15407-201ENSMUST00000136919 634 ntTSL 3 BASIC6.67□□□□□ -1.34
Retrieved 100 of 76,532 protein–RNA pairs in 97.4 ms