Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Olfr1315-ps1-201ENSMUST00000207542 1230 ntAPPRIS P5 TSL 5 BASIC7.45□□□□□ -1.22
Shmt1P50431 Gm2975-201ENSMUST00000209710 820 ntBASIC7.45□□□□□ -1.22
Shmt1P50431 Olfr1245-201ENSMUST00000214870 1062 ntAPPRIS P1 BASIC7.45□□□□□ -1.22
Shmt1P50431 1700124M09Rik-201ENSMUST00000217047 305 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Shmt1P50431 Gm1000-201ENSMUST00000220520 801 ntTSL 3 BASIC7.45□□□□□ -1.22
Shmt1P50431 1700003H04Rik-201ENSMUST00000047110 1040 ntAPPRIS ALT2 TSL 5 BASIC7.45□□□□□ -1.22
Shmt1P50431 Olfr517-201ENSMUST00000084753 1055 ntAPPRIS P1 BASIC7.45□□□□□ -1.22
Shmt1P50431 Mbnl2-202ENSMUST00000167459 4534 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Shmt1P50431 AC111010.1-203ENSMUST00000227287 1548 ntBASIC7.45□□□□□ -1.22
Shmt1P50431 Fmo9-202ENSMUST00000148677 2462 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Shmt1P50431 Kars-ps1-201ENSMUST00000122077 1767 ntBASIC7.45□□□□□ -1.22
Shmt1P50431 Olfr1045-202ENSMUST00000215763 2960 ntAPPRIS P1 TSL 3 BASIC7.45□□□□□ -1.22
Shmt1P50431 Nat8f4-201ENSMUST00000095757 3019 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Shmt1P50431 Gm26518-201ENSMUST00000181328 3270 ntTSL 5 BASIC7.45□□□□□ -1.22
Shmt1P50431 Kcne4-202ENSMUST00000187432 1813 ntTSL 5 BASIC7.45□□□□□ -1.22
Shmt1P50431 Zfp397-201ENSMUST00000060762 5472 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Shmt1P50431 Gbp3-202ENSMUST00000106221 2682 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Shmt1P50431 Hspg2-203ENSMUST00000171332 14176 ntAPPRIS P2 TSL 5 BASIC7.44□□□□□ -1.22
Shmt1P50431 Gm20749-201ENSMUST00000186319 3492 ntBASIC7.44□□□□□ -1.22
Shmt1P50431 Zfp934-208ENSMUST00000222429 1653 ntTSL 3 BASIC7.44□□□□□ -1.22
Shmt1P50431 Ncoa4-202ENSMUST00000163336 4065 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Shmt1P50431 Lilra6-202ENSMUST00000090689 1977 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
Shmt1P50431 Gm45174-201ENSMUST00000208884 3065 ntBASIC7.44□□□□□ -1.22
Shmt1P50431 Nsd2-203ENSMUST00000075812 7142 ntAPPRIS P4 TSL 5 BASIC7.44□□□□□ -1.22
Shmt1P50431 Gm44417-201ENSMUST00000203298 3359 ntBASIC7.44□□□□□ -1.22
Shmt1P50431 Slc15a1-201ENSMUST00000088386 3121 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Shmt1P50431 A530017D24Rik-201ENSMUST00000101077 2315 ntTSL 5 BASIC7.44□□□□□ -1.22
Shmt1P50431 A830010M20Rik-204ENSMUST00000112671 6756 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
Shmt1P50431 Gm45805-201ENSMUST00000212695 2066 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
Shmt1P50431 Rnase4-201ENSMUST00000022428 1518 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Shmt1P50431 Rgs22-203ENSMUST00000172831 4006 ntAPPRIS P1 TSL 5 BASIC7.44□□□□□ -1.22
Shmt1P50431 Gm18248-201ENSMUST00000191164 1846 ntBASIC7.44□□□□□ -1.22
Shmt1P50431 Lin54-204ENSMUST00000137750 4056 ntTSL 5 BASIC7.44□□□□□ -1.22
Shmt1P50431 A930038B10Rik-201ENSMUST00000180412 4084 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
Shmt1P50431 Gm24519-201ENSMUST00000104507 132 ntBASIC7.44□□□□□ -1.22
Shmt1P50431 Gm12468-201ENSMUST00000116189 404 ntBASIC7.44□□□□□ -1.22
Shmt1P50431 Mir1192-201ENSMUST00000116976 121 ntBASIC7.44□□□□□ -1.22
Shmt1P50431 Gm14893-201ENSMUST00000117904 282 ntBASIC7.44□□□□□ -1.22
Shmt1P50431 Gm11889-201ENSMUST00000118402 1079 ntBASIC7.44□□□□□ -1.22
Shmt1P50431 Vamp7-ps-201ENSMUST00000120334 655 ntBASIC7.44□□□□□ -1.22
Shmt1P50431 Smim26-201ENSMUST00000136628 471 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Shmt1P50431 Gm25969-201ENSMUST00000157166 132 ntBASIC7.44□□□□□ -1.22
Shmt1P50431 Rsl24d1-204ENSMUST00000169399 841 ntTSL 3 BASIC7.44□□□□□ -1.22
Shmt1P50431 Gm37349-201ENSMUST00000194205 624 ntBASIC7.44□□□□□ -1.22
Shmt1P50431 Gatad1-204ENSMUST00000196304 704 ntTSL 3 BASIC7.44□□□□□ -1.22
Shmt1P50431 4930599N24Rik-201ENSMUST00000198822 1003 ntBASIC7.44□□□□□ -1.22
Shmt1P50431 Gm3511-201ENSMUST00000199823 204 ntBASIC7.44□□□□□ -1.22
Shmt1P50431 Gm42963-201ENSMUST00000202943 1217 ntBASIC7.44□□□□□ -1.22
Shmt1P50431 Gm45078-201ENSMUST00000205343 546 ntBASIC7.44□□□□□ -1.22
Shmt1P50431 Scoc-209ENSMUST00000212905 798 ntAPPRIS P3 TSL 3 BASIC7.44□□□□□ -1.22
Shmt1P50431 AC123830.1-201ENSMUST00000217156 609 ntTSL 3 BASIC7.44□□□□□ -1.22
Shmt1P50431 AC153529.1-201ENSMUST00000217818 370 ntBASIC7.44□□□□□ -1.22
Shmt1P50431 4930555G07Rik-201ENSMUST00000218226 634 ntTSL 3 BASIC7.44□□□□□ -1.22
Shmt1P50431 Gm19095-201ENSMUST00000220533 730 ntBASIC7.44□□□□□ -1.22
Shmt1P50431 Hmgb1-ps11-201ENSMUST00000221749 621 ntBASIC7.44□□□□□ -1.22
Shmt1P50431 Zfp850-201ENSMUST00000099111 941 ntBASIC7.44□□□□□ -1.22
Shmt1P50431 Rbms3-202ENSMUST00000068962 3320 ntAPPRIS P3 TSL 1 (best) BASIC7.44□□□□□ -1.22
Shmt1P50431 Gm26807-201ENSMUST00000181132 4363 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
Shmt1P50431 Evi2a-205ENSMUST00000170799 2289 ntAPPRIS P1 TSL 2 BASIC7.44□□□□□ -1.22
Shmt1P50431 Nfib-202ENSMUST00000064770 8429 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
Shmt1P50431 Irgm2-203ENSMUST00000209079 3528 ntAPPRIS ALT2 TSL 2 BASIC7.44□□□□□ -1.22
Shmt1P50431 Ggta1-202ENSMUST00000079424 3254 ntAPPRIS ALT2 TSL 5 BASIC7.44□□□□□ -1.22
Shmt1P50431 Gm18451-201ENSMUST00000196759 1719 ntBASIC7.44□□□□□ -1.22
Shmt1P50431 Slc6a19-201ENSMUST00000022048 3936 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Shmt1P50431 Slamf1-201ENSMUST00000015460 2693 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Shmt1P50431 Gimd1-203ENSMUST00000212594 1432 ntAPPRIS P1 TSL 5 BASIC7.44□□□□□ -1.22
Shmt1P50431 9230020A06Rik-201ENSMUST00000151841 2051 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Shmt1P50431 Gcc2-207ENSMUST00000162041 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC7.43□□□□□ -1.22
Shmt1P50431 4930444G20Rik-201ENSMUST00000092672 1773 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
Shmt1P50431 Cpeb4-202ENSMUST00000109412 6303 ntAPPRIS ALT1 TSL 5 BASIC7.43□□□□□ -1.22
Shmt1P50431 Cct8-203ENSMUST00000175977 1470 ntTSL 5 BASIC7.43□□□□□ -1.22
Shmt1P50431 Olfr239-203ENSMUST00000214406 3773 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
Shmt1P50431 Nif3l1-201ENSMUST00000087521 3769 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Shmt1P50431 4931406B18Rik-203ENSMUST00000163619 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC7.43□□□□□ -1.22
Shmt1P50431 Cyp2c39-201ENSMUST00000025968 1817 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Shmt1P50431 Gm15509-201ENSMUST00000162615 2162 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Shmt1P50431 Cdh8-203ENSMUST00000128860 4594 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Shmt1P50431 Gm37653-201ENSMUST00000195401 3578 ntBASIC7.43□□□□□ -1.22
Shmt1P50431 Gm26555-202ENSMUST00000180882 3726 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Shmt1P50431 Fchsd2-201ENSMUST00000032931 4453 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Shmt1P50431 Hspg2-201ENSMUST00000030547 14187 ntAPPRIS ALT2 TSL 5 BASIC7.43□□□□□ -1.22
Shmt1P50431 Agtpbp1-201ENSMUST00000022040 8174 ntAPPRIS P3 TSL 1 (best) BASIC7.43□□□□□ -1.22
Shmt1P50431 Rpl23a-ps2-201ENSMUST00000119375 474 ntBASIC7.43□□□□□ -1.22
Shmt1P50431 Gm15007-201ENSMUST00000119982 710 ntBASIC7.43□□□□□ -1.22
Shmt1P50431 Gm6142-201ENSMUST00000120290 325 ntBASIC7.43□□□□□ -1.22
Shmt1P50431 Gm14489-201ENSMUST00000120868 901 ntBASIC7.43□□□□□ -1.22
Shmt1P50431 Gm16224-201ENSMUST00000127711 412 ntTSL 3 BASIC7.43□□□□□ -1.22
Shmt1P50431 1700025D23Rik-201ENSMUST00000129365 846 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Shmt1P50431 4931413K12Rik-201ENSMUST00000142068 1282 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Shmt1P50431 Rpp14-202ENSMUST00000180369 477 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
Shmt1P50431 Gm27042-201ENSMUST00000181109 1097 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Shmt1P50431 Gm27360-201ENSMUST00000183487 80 ntBASIC7.43□□□□□ -1.22
Shmt1P50431 Mir8105-201ENSMUST00000184718 89 ntBASIC7.43□□□□□ -1.22
Shmt1P50431 1700003C15Rik-202ENSMUST00000188236 710 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Shmt1P50431 Gm28801-201ENSMUST00000188761 449 ntBASIC7.43□□□□□ -1.22
Shmt1P50431 Gm37950-201ENSMUST00000191616 364 ntTSL 3 BASIC7.43□□□□□ -1.22
Shmt1P50431 Gm37231-201ENSMUST00000191716 621 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Shmt1P50431 Gm37024-201ENSMUST00000192224 868 ntBASIC7.43□□□□□ -1.22
Shmt1P50431 Gm37679-201ENSMUST00000192868 1192 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Shmt1P50431 Gm38159-202ENSMUST00000194145 621 ntTSL 5 BASIC7.43□□□□□ -1.22
Retrieved 100 of 76,532 protein–RNA pairs in 66.4 ms