Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 Zfp663-202ENSMUST00000103085 3451 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Lire1P11260 Nsd1-207ENSMUST00000224973 9905 ntBASIC6.85□□□□□ -1.31
Lire1P11260 Lrp2bp-203ENSMUST00000110381 3421 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Lire1P11260 Gm37530-201ENSMUST00000191759 4932 ntBASIC6.85□□□□□ -1.31
Lire1P11260 Gm43164-201ENSMUST00000202529 2128 ntBASIC6.85□□□□□ -1.31
Lire1P11260 Scn3b-203ENSMUST00000171835 4024 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Lire1P11260 Poln-201ENSMUST00000042954 2897 ntAPPRIS P3 TSL 1 (best) BASIC6.85□□□□□ -1.31
Lire1P11260 Ttk-201ENSMUST00000070326 2871 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Lire1P11260 Sec22a-201ENSMUST00000043521 3992 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Lire1P11260 Tnr-202ENSMUST00000192069 12202 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Lire1P11260 Gm12851-201ENSMUST00000117920 421 ntBASIC6.85□□□□□ -1.31
Lire1P11260 Gm15007-201ENSMUST00000119982 710 ntBASIC6.85□□□□□ -1.31
Lire1P11260 4930519F16Rik-202ENSMUST00000127012 685 ntTSL 3 BASIC6.85□□□□□ -1.31
Lire1P11260 Sp3os-203ENSMUST00000137941 628 ntTSL 2 BASIC6.85□□□□□ -1.31
Lire1P11260 Gm13598-201ENSMUST00000147939 625 ntTSL 5 BASIC6.85□□□□□ -1.31
Lire1P11260 Gm11423-202ENSMUST00000152784 686 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Lire1P11260 Gm24685-201ENSMUST00000157764 285 ntBASIC6.85□□□□□ -1.31
Lire1P11260 Gm21293-201ENSMUST00000170919 864 ntTSL 5 BASIC6.85□□□□□ -1.31
Lire1P11260 Vmn2r-ps81-201ENSMUST00000172519 838 ntBASIC6.85□□□□□ -1.31
Lire1P11260 Paip1-206ENSMUST00000173627 1233 ntTSL 5 BASIC6.85□□□□□ -1.31
Lire1P11260 Gm5698-201ENSMUST00000178317 724 ntBASIC6.85□□□□□ -1.31
Lire1P11260 Gm28821-201ENSMUST00000185637 610 ntTSL 3 BASIC6.85□□□□□ -1.31
Lire1P11260 4931428L18Rik-203ENSMUST00000187659 423 ntAPPRIS ALT2 TSL 1 (best) BASIC6.85□□□□□ -1.31
Lire1P11260 Gm28980-201ENSMUST00000187877 219 ntBASIC6.85□□□□□ -1.31
Lire1P11260 Gm28528-201ENSMUST00000188560 857 ntTSL 5 BASIC6.85□□□□□ -1.31
Lire1P11260 A930005N03Rik-201ENSMUST00000194920 1247 ntBASIC6.85□□□□□ -1.31
Lire1P11260 Gm19739-201ENSMUST00000195941 153 ntBASIC6.85□□□□□ -1.31
Lire1P11260 Gm43560-201ENSMUST00000198100 773 ntBASIC6.85□□□□□ -1.31
Lire1P11260 2010309G21Rik-201ENSMUST00000198927 458 ntTSL 3 BASIC6.85□□□□□ -1.31
Lire1P11260 Gm4605-201ENSMUST00000203148 625 ntBASIC6.85□□□□□ -1.31
Lire1P11260 Gm8921-201ENSMUST00000204306 649 ntBASIC6.85□□□□□ -1.31
Lire1P11260 Gm19254-201ENSMUST00000204828 294 ntBASIC6.85□□□□□ -1.31
Lire1P11260 AC105169.1-201ENSMUST00000218912 1294 ntBASIC6.85□□□□□ -1.31
Lire1P11260 Gm18112-201ENSMUST00000219862 1195 ntBASIC6.85□□□□□ -1.31
Lire1P11260 Gm46317-201ENSMUST00000221103 393 ntBASIC6.85□□□□□ -1.31
Lire1P11260 Gm46323-201ENSMUST00000223136 628 ntTSL 5 BASIC6.85□□□□□ -1.31
Lire1P11260 Gcnt2-204ENSMUST00000223570 335 ntBASIC6.85□□□□□ -1.31
Lire1P11260 Cthrc1-204ENSMUST00000226433 596 ntBASIC6.85□□□□□ -1.31
Lire1P11260 AC122251.2-201ENSMUST00000227341 603 ntBASIC6.85□□□□□ -1.31
Lire1P11260 Spink6-201ENSMUST00000068473 587 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Lire1P11260 5430427O19Rik-201ENSMUST00000113976 3754 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Lire1P11260 Acaca-202ENSMUST00000103201 9513 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
Lire1P11260 Xcr1-201ENSMUST00000182350 4453 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Lire1P11260 Siae-202ENSMUST00000213126 2306 ntAPPRIS ALT2 TSL 5 BASIC6.85□□□□□ -1.31
Lire1P11260 Zbtb14-202ENSMUST00000112674 3743 ntAPPRIS P1 TSL 3 BASIC6.85□□□□□ -1.31
Lire1P11260 Cpsf6-201ENSMUST00000069168 6526 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Lire1P11260 Cyp2j6-201ENSMUST00000030303 3605 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Lire1P11260 Gm19028-201ENSMUST00000189614 1873 ntBASIC6.85□□□□□ -1.31
Lire1P11260 Cyp2j8-201ENSMUST00000124729 1512 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
Lire1P11260 Vmn1r9-203ENSMUST00000228714 4573 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
Lire1P11260 Olfr1247-203ENSMUST00000216424 2164 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
Lire1P11260 Gatad2b-203ENSMUST00000197988 1815 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Lire1P11260 Gm44249-201ENSMUST00000204538 1805 ntBASIC6.85□□□□□ -1.31
Lire1P11260 Catsperg2-209ENSMUST00000209126 3438 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Lire1P11260 Lrtm1-201ENSMUST00000055662 7321 ntAPPRIS P2 TSL 1 (best) BASIC6.85□□□□□ -1.31
Lire1P11260 Gm46136-202ENSMUST00000217053 6329 ntTSL 5 BASIC6.85□□□□□ -1.31
Lire1P11260 Tshr-202ENSMUST00000021346 4311 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Lire1P11260 Gm15930-201ENSMUST00000156603 2037 ntBASIC6.84□□□□□ -1.31
Lire1P11260 Lpin2-203ENSMUST00000126681 4167 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Lire1P11260 Rbms3-205ENSMUST00000111772 2234 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.31
Lire1P11260 Gm28867-201ENSMUST00000190194 2166 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Lire1P11260 Cyld-202ENSMUST00000098519 7954 ntAPPRIS ALT1 TSL 5 BASIC6.84□□□□□ -1.31
Lire1P11260 Mob1b-202ENSMUST00000113229 8967 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Lire1P11260 Trbv1-201ENSMUST00000103262 417 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
Lire1P11260 Ggact-202ENSMUST00000110679 686 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Lire1P11260 Amelx-203ENSMUST00000112119 841 ntAPPRIS ALT2 TSL 5 BASIC6.84□□□□□ -1.31
Lire1P11260 Gm13768-201ENSMUST00000116469 929 ntBASIC6.84□□□□□ -1.31
Lire1P11260 Gm5390-201ENSMUST00000119069 1230 ntBASIC6.84□□□□□ -1.31
Lire1P11260 Gm13915-201ENSMUST00000119314 931 ntBASIC6.84□□□□□ -1.31
Lire1P11260 Dmrtc1a-203ENSMUST00000120808 1061 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Lire1P11260 Gm15786-201ENSMUST00000121079 450 ntBASIC6.84□□□□□ -1.31
Lire1P11260 Gm22206-201ENSMUST00000158612 116 ntBASIC6.84□□□□□ -1.31
Lire1P11260 Gm8164-201ENSMUST00000169120 1192 ntBASIC6.84□□□□□ -1.31
Lire1P11260 Gm22702-201ENSMUST00000175372 69 ntBASIC6.84□□□□□ -1.31
Lire1P11260 Gm498-203ENSMUST00000179036 990 ntTSL 5 BASIC6.84□□□□□ -1.31
Lire1P11260 Trav6d-4-202ENSMUST00000183820 338 ntAPPRIS ALT2 BASIC6.84□□□□□ -1.31
Lire1P11260 Gm28869-201ENSMUST00000187199 811 ntTSL 3 BASIC6.84□□□□□ -1.31
Lire1P11260 Gm5251-201ENSMUST00000188959 472 ntBASIC6.84□□□□□ -1.31
Lire1P11260 Gm29072-201ENSMUST00000191149 678 ntBASIC6.84□□□□□ -1.31
Lire1P11260 Gm43057-201ENSMUST00000196789 429 ntTSL 5 BASIC6.84□□□□□ -1.31
Lire1P11260 Gm40304-201ENSMUST00000202154 268 ntTSL 3 BASIC6.84□□□□□ -1.31
Lire1P11260 Gm21048-201ENSMUST00000202470 1166 ntBASIC6.84□□□□□ -1.31
Lire1P11260 Cnot2-201ENSMUST00000020374 1059 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Lire1P11260 Gm45181-201ENSMUST00000207878 449 ntTSL 3 BASIC6.84□□□□□ -1.31
Lire1P11260 Gm45299-201ENSMUST00000210199 420 ntBASIC6.84□□□□□ -1.31
Lire1P11260 Tbc1d7-204ENSMUST00000220787 892 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Lire1P11260 AC099629.1-201ENSMUST00000226778 464 ntBASIC6.84□□□□□ -1.31
Lire1P11260 AC125539.1-201ENSMUST00000227423 622 ntBASIC6.84□□□□□ -1.31
Lire1P11260 Tex37-201ENSMUST00000063456 814 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Lire1P11260 A730045E13Rik-201ENSMUST00000066740 854 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Lire1P11260 Grxcr1-201ENSMUST00000094715 1071 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Lire1P11260 Gm43845-201ENSMUST00000202462 1820 ntBASIC6.84□□□□□ -1.31
Lire1P11260 Nlrp1c-ps-201ENSMUST00000171546 3457 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Lire1P11260 Gm17540-201ENSMUST00000181617 1528 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Lire1P11260 Rbm46-202ENSMUST00000182637 2058 ntTSL 5 BASIC6.84□□□□□ -1.31
Lire1P11260 Tdrkh-201ENSMUST00000045245 2642 ntAPPRIS P2 TSL 1 (best) BASIC6.84□□□□□ -1.31
Lire1P11260 Zfp27-202ENSMUST00000159920 3381 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
Lire1P11260 Olfr734-203ENSMUST00000217152 4416 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
Lire1P11260 Gm13106-201ENSMUST00000119045 1443 ntBASIC6.84□□□□□ -1.32
Lire1P11260 Rnf146-205ENSMUST00000162335 1434 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.32
Retrieved 100 of 76,532 protein–RNA pairs in 53.3 ms