Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Pde10a-206ENSMUST00000115720 3328 ntAPPRIS ALT2 TSL 1 (best) BASIC8.07□□□□□ -1.12
Col1a1P11087 4930545L23Rik-201ENSMUST00000138303 2502 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Col1a1P11087 Gm44021-201ENSMUST00000203055 3516 ntBASIC8.07□□□□□ -1.12
Col1a1P11087 Gm32036-201ENSMUST00000221484 2638 ntTSL 2 BASIC8.07□□□□□ -1.12
Col1a1P11087 Irak3-205ENSMUST00000145665 2869 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Col1a1P11087 Gm29154-258ENSMUST00000217560 1733 ntTSL 5 BASIC8.07□□□□□ -1.12
Col1a1P11087 Star-201ENSMUST00000033979 4046 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Col1a1P11087 Vmn1r4-202ENSMUST00000176838 2235 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Col1a1P11087 Hnrnpc-207ENSMUST00000227536 1301 ntBASIC8.07□□□□□ -1.12
Col1a1P11087 Vmn2r-ps115-201ENSMUST00000177393 1809 ntBASIC8.07□□□□□ -1.12
Col1a1P11087 Lrrc6-201ENSMUST00000023006 2084 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Col1a1P11087 C230057A21Rik-201ENSMUST00000194944 3331 ntBASIC8.07□□□□□ -1.12
Col1a1P11087 Vmn2r44-201ENSMUST00000166499 3660 ntAPPRIS P1 TSL 5 BASIC8.07□□□□□ -1.12
Col1a1P11087 Usp17lc-201ENSMUST00000079348 1697 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Col1a1P11087 Rufy3-201ENSMUST00000031229 4049 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Col1a1P11087 Dach2-203ENSMUST00000113379 2512 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Col1a1P11087 Olfr1063-ps1-201ENSMUST00000118807 942 ntBASIC8.06□□□□□ -1.12
Col1a1P11087 Gm14712-201ENSMUST00000120195 772 ntBASIC8.06□□□□□ -1.12
Col1a1P11087 4933405E24Rik-201ENSMUST00000131019 1078 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Col1a1P11087 Gm15122-201ENSMUST00000135434 462 ntTSL 2 BASIC8.06□□□□□ -1.12
Col1a1P11087 Gm23225-201ENSMUST00000158121 114 ntBASIC8.06□□□□□ -1.12
Col1a1P11087 Gm22701-201ENSMUST00000175371 291 ntBASIC8.06□□□□□ -1.12
Col1a1P11087 Raet1e-202ENSMUST00000178026 1218 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Col1a1P11087 Gm5225-201ENSMUST00000178572 324 ntAPPRIS P1 BASIC8.06□□□□□ -1.12
Col1a1P11087 Rpl31-ps23-201ENSMUST00000180440 388 ntBASIC8.06□□□□□ -1.12
Col1a1P11087 Gm6931-201ENSMUST00000183103 371 ntBASIC8.06□□□□□ -1.12
Col1a1P11087 1110008L16Rik-203ENSMUST00000183654 943 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Col1a1P11087 Mir7211-201ENSMUST00000184071 63 ntBASIC8.06□□□□□ -1.12
Col1a1P11087 Gm27210-201ENSMUST00000184263 402 ntBASIC8.06□□□□□ -1.12
Col1a1P11087 Gm38097-201ENSMUST00000192936 439 ntBASIC8.06□□□□□ -1.12
Col1a1P11087 Gm43383-201ENSMUST00000195981 469 ntBASIC8.06□□□□□ -1.12
Col1a1P11087 Ghrl-207ENSMUST00000204533 323 ntTSL 2 BASIC8.06□□□□□ -1.12
Col1a1P11087 Gm33178-201ENSMUST00000212090 257 ntBASIC8.06□□□□□ -1.12
Col1a1P11087 Gm32005-201ENSMUST00000212446 959 ntTSL 5 BASIC8.06□□□□□ -1.12
Col1a1P11087 AC156790.1-201ENSMUST00000226572 559 ntBASIC8.06□□□□□ -1.12
Col1a1P11087 Oosp3-201ENSMUST00000069760 807 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Col1a1P11087 Raet1d-201ENSMUST00000095795 1271 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Col1a1P11087 Olfr1079-201ENSMUST00000099882 948 ntAPPRIS P2 BASIC8.06□□□□□ -1.12
Col1a1P11087 Cebpz-201ENSMUST00000024885 4074 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Col1a1P11087 Agtpbp1-201ENSMUST00000022040 8174 ntAPPRIS P3 TSL 1 (best) BASIC8.06□□□□□ -1.12
Col1a1P11087 Olfr303-205ENSMUST00000216409 4106 ntAPPRIS P1 TSL 5 BASIC8.06□□□□□ -1.12
Col1a1P11087 Gm37633-201ENSMUST00000192858 2700 ntBASIC8.06□□□□□ -1.12
Col1a1P11087 Pcyt1a-203ENSMUST00000115137 4244 ntTSL 5 BASIC8.06□□□□□ -1.12
Col1a1P11087 Gm42397-201ENSMUST00000207472 2002 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Col1a1P11087 Fbxw28-202ENSMUST00000112040 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC8.06□□□□□ -1.12
Col1a1P11087 Itpr1-201ENSMUST00000032192 9870 ntAPPRIS P2 TSL 1 (best) BASIC8.06□□□□□ -1.12
Col1a1P11087 Cdc42bpa-203ENSMUST00000097453 6704 ntTSL 5 BASIC8.06□□□□□ -1.12
Col1a1P11087 Gm14548-201ENSMUST00000070639 2128 ntAPPRIS P1 TSL 5 BASIC8.06□□□□□ -1.12
Col1a1P11087 Entpd5-202ENSMUST00000072061 4858 ntTSL 5 BASIC8.06□□□□□ -1.12
Col1a1P11087 Depdc5-204ENSMUST00000119705 7929 ntAPPRIS P2 TSL 1 (best) BASIC8.06□□□□□ -1.12
Col1a1P11087 Gm32568-201ENSMUST00000212782 1421 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Col1a1P11087 Pcmtd2-202ENSMUST00000108754 3499 ntAPPRIS ALT2 TSL 1 (best) BASIC8.06□□□□□ -1.12
Col1a1P11087 Mtpap-201ENSMUST00000025077 2651 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Col1a1P11087 Gm43497-201ENSMUST00000201137 2316 ntBASIC8.06□□□□□ -1.12
Col1a1P11087 Osbpl3-202ENSMUST00000090019 4039 ntAPPRIS ALT1 TSL 5 BASIC8.06□□□□□ -1.12
Col1a1P11087 Fbxo7-204ENSMUST00000130320 5388 ntAPPRIS P3 TSL 1 (best) BASIC8.06□□□□□ -1.12
Col1a1P11087 Gm13301-201ENSMUST00000121728 2446 ntBASIC8.06□□□□□ -1.12
Col1a1P11087 Olfr1426-205ENSMUST00000219155 2503 ntAPPRIS P1 TSL 5 BASIC8.06□□□□□ -1.12
Col1a1P11087 Trappc13-203ENSMUST00000141557 3502 ntAPPRIS ALT1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Col1a1P11087 Igkv4-79-201ENSMUST00000103342 358 ntAPPRIS P1 BASIC8.06□□□□□ -1.12
Col1a1P11087 Gm26422-201ENSMUST00000104276 132 ntBASIC8.06□□□□□ -1.12
Col1a1P11087 Gm11256-201ENSMUST00000118109 829 ntBASIC8.06□□□□□ -1.12
Col1a1P11087 Gm11504-201ENSMUST00000120211 173 ntBASIC8.06□□□□□ -1.12
Col1a1P11087 D830026I12Rik-201ENSMUST00000124434 935 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Col1a1P11087 Gm26162-201ENSMUST00000157793 132 ntBASIC8.06□□□□□ -1.12
Col1a1P11087 Ccl27b-201ENSMUST00000177785 425 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Col1a1P11087 Gm36939-201ENSMUST00000194889 439 ntBASIC8.06□□□□□ -1.12
Col1a1P11087 Gm43212-201ENSMUST00000198208 394 ntBASIC8.06□□□□□ -1.12
Col1a1P11087 Rpl9-ps8-201ENSMUST00000198343 562 ntBASIC8.06□□□□□ -1.12
Col1a1P11087 U90926-202ENSMUST00000201332 524 ntAPPRIS P5 TSL 1 (best) BASIC8.06□□□□□ -1.12
Col1a1P11087 4930563H07Rik-201ENSMUST00000203494 628 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Col1a1P11087 Gm38584-201ENSMUST00000207361 517 ntTSL 5 BASIC8.06□□□□□ -1.12
Col1a1P11087 Gm45734-201ENSMUST00000211916 411 ntBASIC8.06□□□□□ -1.12
Col1a1P11087 Olfr1240-201ENSMUST00000215362 1074 ntAPPRIS P1 BASIC8.06□□□□□ -1.12
Col1a1P11087 AC163651.1-201ENSMUST00000222500 372 ntBASIC8.06□□□□□ -1.12
Col1a1P11087 Gm46379-201ENSMUST00000222551 265 ntBASIC8.06□□□□□ -1.12
Col1a1P11087 CT009515.3-201ENSMUST00000226509 671 ntBASIC8.06□□□□□ -1.12
Col1a1P11087 Msantd4-202ENSMUST00000212075 2800 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Col1a1P11087 AC124516.2-201ENSMUST00000221455 1829 ntBASIC8.06□□□□□ -1.12
Col1a1P11087 Ankrd6-203ENSMUST00000084749 4573 ntAPPRIS P2 TSL 5 BASIC8.06□□□□□ -1.12
Col1a1P11087 Mospd2-202ENSMUST00000112247 2479 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Col1a1P11087 Snhg17-209ENSMUST00000186993 3144 ntBASIC8.06□□□□□ -1.12
Col1a1P11087 B230354K17Rik-201ENSMUST00000181149 4897 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Col1a1P11087 Cnot2-210ENSMUST00000168036 2693 ntTSL 5 BASIC8.05□□□□□ -1.12
Col1a1P11087 AC122828.2-201ENSMUST00000222511 2880 ntBASIC8.05□□□□□ -1.12
Col1a1P11087 4930431P03Rik-204ENSMUST00000228169 1967 ntBASIC8.05□□□□□ -1.12
Col1a1P11087 5330413P13Rik-203ENSMUST00000150466 2173 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Col1a1P11087 Adgre1-202ENSMUST00000086763 3245 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Col1a1P11087 Trrap-215ENSMUST00000213013 12398 ntAPPRIS ALT2 TSL 5 BASIC8.05□□□□□ -1.12
Col1a1P11087 Gm38244-201ENSMUST00000191737 2586 ntBASIC8.05□□□□□ -1.12
Col1a1P11087 Ccdc191-206ENSMUST00000178400 3643 ntAPPRIS P2 TSL 5 BASIC8.05□□□□□ -1.12
Col1a1P11087 Msn-201ENSMUST00000117399 3842 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Col1a1P11087 Dlg2-201ENSMUST00000074273 5278 ntAPPRIS ALT2 TSL 5 BASIC8.05□□□□□ -1.12
Col1a1P11087 Phc1-208ENSMUST00000160696 4213 ntAPPRIS P3 TSL 1 (best) BASIC8.05□□□□□ -1.12
Col1a1P11087 Serpina12-201ENSMUST00000043915 3690 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Col1a1P11087 AC165260.6-205ENSMUST00000224190 9762 ntBASIC8.05□□□□□ -1.12
Col1a1P11087 Acad11-201ENSMUST00000047799 3444 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Col1a1P11087 Cep290-210ENSMUST00000220346 8211 ntAPPRIS P1 TSL 5 BASIC8.05□□□□□ -1.12
Col1a1P11087 Ppp1r1c-203ENSMUST00000111780 708 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Col1a1P11087 Gm13598-201ENSMUST00000147939 625 ntTSL 5 BASIC8.05□□□□□ -1.12
Retrieved 100 of 76,532 protein–RNA pairs in 89.2 ms