Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Olfr1325-201ENSMUST00000054541 948 ntAPPRIS P2 BASIC6.7□□□□□ -1.34
Pcdh1F7BJK1 Olfr1255-201ENSMUST00000057369 933 ntBASIC6.7□□□□□ -1.34
Pcdh1F7BJK1 Ube2e2-201ENSMUST00000076133 606 ntAPPRIS P1 TSL 3 BASIC6.7□□□□□ -1.34
Pcdh1F7BJK1 Olfr742-201ENSMUST00000089836 1120 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
Pcdh1F7BJK1 Olfr259-201ENSMUST00000099862 939 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
Pcdh1F7BJK1 Mbd5-202ENSMUST00000112745 6037 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Pcdh1F7BJK1 Gm26873-201ENSMUST00000181390 2368 ntTSL 5 BASIC6.7□□□□□ -1.34
Pcdh1F7BJK1 Gm37510-201ENSMUST00000194151 4762 ntBASIC6.7□□□□□ -1.34
Pcdh1F7BJK1 Erbin-202ENSMUST00000053927 6103 ntAPPRIS ALT2 TSL 5 BASIC6.7□□□□□ -1.34
Pcdh1F7BJK1 Sspo-206ENSMUST00000212740 15408 ntAPPRIS ALT2 TSL 5 BASIC6.7□□□□□ -1.34
Pcdh1F7BJK1 4930550L24Rik-202ENSMUST00000118305 1684 ntAPPRIS P1 TSL 3 BASIC6.7□□□□□ -1.34
Pcdh1F7BJK1 Olfr961-202ENSMUST00000219295 3374 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
Pcdh1F7BJK1 Gm43422-201ENSMUST00000199780 3571 ntBASIC6.7□□□□□ -1.34
Pcdh1F7BJK1 Il1f5-201ENSMUST00000028360 2842 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Pcdh1F7BJK1 Chil3-201ENSMUST00000063062 1539 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Pcdh1F7BJK1 Chil4-201ENSMUST00000082219 1539 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Pcdh1F7BJK1 Ptbp2-207ENSMUST00000197464 1742 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Pcdh1F7BJK1 Dnajc18-201ENSMUST00000025208 5169 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Pcdh1F7BJK1 C87499-201ENSMUST00000053304 1901 ntAPPRIS P2 TSL 1 (best) BASIC6.7□□□□□ -1.34
Pcdh1F7BJK1 AC122408.2-201ENSMUST00000217901 1391 ntBASIC6.69□□□□□ -1.34
Pcdh1F7BJK1 AC124675.1-201ENSMUST00000226263 1390 ntBASIC6.69□□□□□ -1.34
Pcdh1F7BJK1 Skint7-201ENSMUST00000055014 1788 ntAPPRIS P3 TSL 1 (best) BASIC6.69□□□□□ -1.34
Pcdh1F7BJK1 Ptprg-202ENSMUST00000119888 2787 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Pcdh1F7BJK1 Clasp1-204ENSMUST00000178710 7566 ntAPPRIS ALT2 TSL 5 BASIC6.69□□□□□ -1.34
Pcdh1F7BJK1 Gm32486-201ENSMUST00000209810 3816 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Pcdh1F7BJK1 Celf2-214ENSMUST00000170438 8856 ntTSL 5 BASIC6.69□□□□□ -1.34
Pcdh1F7BJK1 Gm8276-201ENSMUST00000192231 1812 ntBASIC6.69□□□□□ -1.34
Pcdh1F7BJK1 Sap30bp-203ENSMUST00000140991 3654 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Pcdh1F7BJK1 Phc3-204ENSMUST00000108255 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC6.69□□□□□ -1.34
Pcdh1F7BJK1 Gm13986-202ENSMUST00000148587 3469 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Pcdh1F7BJK1 Parp8-201ENSMUST00000022239 3098 ntTSL 5 BASIC6.69□□□□□ -1.34
Pcdh1F7BJK1 Yy2-201ENSMUST00000065806 2867 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
Pcdh1F7BJK1 Kng1-201ENSMUST00000023589 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC6.69□□□□□ -1.34
Pcdh1F7BJK1 Frs2-201ENSMUST00000020381 6420 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Pcdh1F7BJK1 Trmt10b-201ENSMUST00000044673 2064 ntAPPRIS P2 TSL 1 (best) BASIC6.69□□□□□ -1.34
Pcdh1F7BJK1 Atrx-201ENSMUST00000101305 2903 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Pcdh1F7BJK1 Dst-209ENSMUST00000182697 2704 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Pcdh1F7BJK1 Lrp2-201ENSMUST00000080953 15460 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
Pcdh1F7BJK1 Gm17106-201ENSMUST00000105610 459 ntTSL 5 BASIC6.69□□□□□ -1.34
Pcdh1F7BJK1 Gm14305-201ENSMUST00000108980 1167 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Pcdh1F7BJK1 Rgs8-204ENSMUST00000111814 678 ntTSL 3 BASIC6.69□□□□□ -1.34
Pcdh1F7BJK1 Gm14576-201ENSMUST00000118073 1111 ntBASIC6.69□□□□□ -1.34
Pcdh1F7BJK1 Gm4918-201ENSMUST00000119420 1084 ntBASIC6.69□□□□□ -1.34
Pcdh1F7BJK1 Cyp4a30-ps-201ENSMUST00000120813 1020 ntBASIC6.69□□□□□ -1.34
Pcdh1F7BJK1 Mgst1-207ENSMUST00000140932 742 ntTSL 3 BASIC6.69□□□□□ -1.34
Pcdh1F7BJK1 Defa-ps3-201ENSMUST00000142705 282 ntBASIC6.69□□□□□ -1.34
Pcdh1F7BJK1 Gm22143-201ENSMUST00000157401 203 ntBASIC6.69□□□□□ -1.34
Pcdh1F7BJK1 Mir1968-201ENSMUST00000157429 68 ntBASIC6.69□□□□□ -1.34
Pcdh1F7BJK1 Gm22811-201ENSMUST00000157468 154 ntBASIC6.69□□□□□ -1.34
Pcdh1F7BJK1 Gm26355-201ENSMUST00000158220 105 ntBASIC6.69□□□□□ -1.34
Pcdh1F7BJK1 Gm22949-201ENSMUST00000158562 105 ntBASIC6.69□□□□□ -1.34
Pcdh1F7BJK1 Gm15775-201ENSMUST00000159796 538 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Pcdh1F7BJK1 Gm18415-201ENSMUST00000177464 647 ntBASIC6.69□□□□□ -1.34
Pcdh1F7BJK1 Astx6-201ENSMUST00000180281 1150 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Pcdh1F7BJK1 Gm26801-201ENSMUST00000180591 1219 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Pcdh1F7BJK1 9330179D12Rik-202ENSMUST00000180811 1001 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Pcdh1F7BJK1 Gm26980-201ENSMUST00000183321 395 ntBASIC6.69□□□□□ -1.34
Pcdh1F7BJK1 Gm29015-201ENSMUST00000187147 207 ntTSL 5 BASIC6.69□□□□□ -1.34
Pcdh1F7BJK1 1700021A07Rik-202ENSMUST00000187763 485 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Pcdh1F7BJK1 Gm28145-201ENSMUST00000189742 380 ntBASIC6.69□□□□□ -1.34
Pcdh1F7BJK1 Gstp3-202ENSMUST00000189808 708 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Pcdh1F7BJK1 Krtdap-209ENSMUST00000190990 403 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Pcdh1F7BJK1 Gm38063-201ENSMUST00000193990 342 ntBASIC6.69□□□□□ -1.34
Pcdh1F7BJK1 Gm37021-201ENSMUST00000195835 663 ntTSL 5 BASIC6.69□□□□□ -1.34
Pcdh1F7BJK1 Gm43390-201ENSMUST00000196614 421 ntBASIC6.69□□□□□ -1.34
Pcdh1F7BJK1 4933401H06Rik-201ENSMUST00000199058 827 ntTSL 3 BASIC6.69□□□□□ -1.34
Pcdh1F7BJK1 Gm42824-201ENSMUST00000199361 247 ntBASIC6.69□□□□□ -1.34
Pcdh1F7BJK1 Gm42603-201ENSMUST00000199893 2146 ntBASIC6.69□□□□□ -1.34
Pcdh1F7BJK1 Gm43008-201ENSMUST00000202346 286 ntBASIC6.69□□□□□ -1.34
Pcdh1F7BJK1 Gm6064-201ENSMUST00000203999 454 ntBASIC6.69□□□□□ -1.34
Pcdh1F7BJK1 Bsph1-202ENSMUST00000204715 707 ntAPPRIS ALT2 TSL 1 (best) BASIC6.69□□□□□ -1.34
Pcdh1F7BJK1 AC132474.3-201ENSMUST00000213244 383 ntTSL 5 BASIC6.69□□□□□ -1.34
Pcdh1F7BJK1 Gm35454-202ENSMUST00000214817 1101 ntTSL 5 BASIC6.69□□□□□ -1.34
Pcdh1F7BJK1 AL772397.1-201ENSMUST00000216707 606 ntBASIC6.69□□□□□ -1.34
Pcdh1F7BJK1 Gm2089-201ENSMUST00000218294 479 ntBASIC6.69□□□□□ -1.34
Pcdh1F7BJK1 AC124537.2-201ENSMUST00000220872 883 ntTSL 5 BASIC6.69□□□□□ -1.34
Pcdh1F7BJK1 AC163660.3-202ENSMUST00000224917 464 ntBASIC6.69□□□□□ -1.34
Pcdh1F7BJK1 Stat4-201ENSMUST00000027277 2982 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Pcdh1F7BJK1 Fgf21-201ENSMUST00000033099 951 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Pcdh1F7BJK1 Olfr218-201ENSMUST00000057548 942 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
Pcdh1F7BJK1 Olfr310-201ENSMUST00000081918 1082 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
Pcdh1F7BJK1 Olfr1188-201ENSMUST00000090701 968 ntAPPRIS P2 BASIC6.69□□□□□ -1.34
Pcdh1F7BJK1 Olfr1107-201ENSMUST00000099865 1109 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
Pcdh1F7BJK1 Slc25a53-214ENSMUST00000171738 2567 ntAPPRIS P1 TSL 2 BASIC6.69□□□□□ -1.34
Pcdh1F7BJK1 Vmn1r57-204ENSMUST00000228062 2365 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
Pcdh1F7BJK1 Pecam1-207ENSMUST00000183610 3006 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Pcdh1F7BJK1 Apbb2-210ENSMUST00000160870 6526 ntAPPRIS ALT2 TSL 1 (best) BASIC6.69□□□□□ -1.34
Pcdh1F7BJK1 Adgrg6-201ENSMUST00000041168 6507 ntAPPRIS P2 TSL 1 (best) BASIC6.69□□□□□ -1.34
Pcdh1F7BJK1 Cyp2j7-201ENSMUST00000162514 1515 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
Pcdh1F7BJK1 Pigc-202ENSMUST00000111594 3290 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Pcdh1F7BJK1 Golgb1-203ENSMUST00000114812 11012 ntAPPRIS ALT2 TSL 5 BASIC6.69□□□□□ -1.34
Pcdh1F7BJK1 Gm26569-201ENSMUST00000181968 1789 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Pcdh1F7BJK1 Gm6999-201ENSMUST00000180427 2658 ntTSL 2 BASIC6.69□□□□□ -1.34
Pcdh1F7BJK1 Gm38416-201ENSMUST00000209648 3565 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Pcdh1F7BJK1 Kcnj15-207ENSMUST00000113861 3385 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Pcdh1F7BJK1 Mapre2-202ENSMUST00000115830 2496 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Pcdh1F7BJK1 AC156645.1-201ENSMUST00000223066 5194 ntBASIC6.69□□□□□ -1.34
Pcdh1F7BJK1 Olfr221-201ENSMUST00000052560 2741 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
Pcdh1F7BJK1 Tpte-201ENSMUST00000077194 2549 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Pcdh1F7BJK1 Gucy1b3-201ENSMUST00000029635 3223 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Retrieved 100 of 76,532 protein–RNA pairs in 59.6 ms