Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Il15ra-214ENSMUST00000138349 1936 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Trim42Q9D2H5 Olfr332-201ENSMUST00000180165 3426 ntAPPRIS P1 TSL 2 BASIC7.8□□□□□ -1.16
Trim42Q9D2H5 Btbd3-201ENSMUST00000075410 4940 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Trim42Q9D2H5 Mllt10-202ENSMUST00000114669 3865 ntTSL 5 BASIC7.79□□□□□ -1.16
Trim42Q9D2H5 Ganab-201ENSMUST00000096246 3862 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Trim42Q9D2H5 Slc18b1-201ENSMUST00000119597 2837 ntAPPRIS P1 TSL 5 BASIC7.79□□□□□ -1.16
Trim42Q9D2H5 1810053B23Rik-204ENSMUST00000185971 1309 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Trim42Q9D2H5 Gm28583-201ENSMUST00000188903 2141 ntBASIC7.79□□□□□ -1.16
Trim42Q9D2H5 Ftx-203ENSMUST00000130063 4275 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Trim42Q9D2H5 Crisp3-201ENSMUST00000026499 1417 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Trim42Q9D2H5 Skap1-201ENSMUST00000071510 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC7.79□□□□□ -1.16
Trim42Q9D2H5 Cnot2-210ENSMUST00000168036 2693 ntTSL 5 BASIC7.79□□□□□ -1.16
Trim42Q9D2H5 Gm19028-201ENSMUST00000189614 1873 ntBASIC7.79□□□□□ -1.16
Trim42Q9D2H5 Gm45470-201ENSMUST00000209685 7044 ntTSL 5 BASIC7.79□□□□□ -1.16
Trim42Q9D2H5 Unc13c-202ENSMUST00000184666 8796 ntAPPRIS P1 TSL 5 BASIC7.79□□□□□ -1.16
Trim42Q9D2H5 Rlim-201ENSMUST00000070705 7429 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Trim42Q9D2H5 Virma-202ENSMUST00000059914 6506 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Trim42Q9D2H5 Bank1-201ENSMUST00000041577 3268 ntAPPRIS P3 TSL 1 (best) BASIC7.79□□□□□ -1.16
Trim42Q9D2H5 Hmgn2-202ENSMUST00000102552 676 ntAPPRIS P2 TSL 2 BASIC7.79□□□□□ -1.16
Trim42Q9D2H5 Smim8-203ENSMUST00000108132 864 ntAPPRIS P1 TSL 3 BASIC7.79□□□□□ -1.16
Trim42Q9D2H5 Cd59b-203ENSMUST00000111131 555 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Trim42Q9D2H5 Rfc4-203ENSMUST00000115338 1279 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Trim42Q9D2H5 Gm12393-201ENSMUST00000117084 848 ntBASIC7.79□□□□□ -1.16
Trim42Q9D2H5 Gm12038-201ENSMUST00000117322 207 ntBASIC7.79□□□□□ -1.16
Trim42Q9D2H5 Gm15923-201ENSMUST00000119300 1169 ntBASIC7.79□□□□□ -1.16
Trim42Q9D2H5 Gm16428-201ENSMUST00000121193 723 ntBASIC7.79□□□□□ -1.16
Trim42Q9D2H5 Gm14903-201ENSMUST00000122435 537 ntBASIC7.79□□□□□ -1.16
Trim42Q9D2H5 Gm23111-201ENSMUST00000122652 105 ntBASIC7.79□□□□□ -1.16
Trim42Q9D2H5 Gm15656-201ENSMUST00000132076 615 ntTSL 3 BASIC7.79□□□□□ -1.16
Trim42Q9D2H5 Gm15627-201ENSMUST00000140421 437 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Trim42Q9D2H5 Gm14376-201ENSMUST00000145297 297 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Trim42Q9D2H5 Rrm2b-207ENSMUST00000146821 420 ntTSL 5 BASIC7.79□□□□□ -1.16
Trim42Q9D2H5 Gm13661-201ENSMUST00000154297 318 ntTSL 3 BASIC7.79□□□□□ -1.16
Trim42Q9D2H5 Gm23827-201ENSMUST00000157116 145 ntBASIC7.79□□□□□ -1.16
Trim42Q9D2H5 Mir1964-201ENSMUST00000158514 83 ntBASIC7.79□□□□□ -1.16
Trim42Q9D2H5 Olfr1381-201ENSMUST00000167248 936 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
Trim42Q9D2H5 Gm2951-201ENSMUST00000169447 490 ntBASIC7.79□□□□□ -1.16
Trim42Q9D2H5 Gm2930-201ENSMUST00000170403 474 ntBASIC7.79□□□□□ -1.16
Trim42Q9D2H5 Gm25306-201ENSMUST00000175288 117 ntBASIC7.79□□□□□ -1.16
Trim42Q9D2H5 Gm20655-201ENSMUST00000176132 473 ntTSL 3 BASIC7.79□□□□□ -1.16
Trim42Q9D2H5 Gm27199-201ENSMUST00000185026 623 ntTSL 2 BASIC7.79□□□□□ -1.16
Trim42Q9D2H5 Rpl23a-ps7-201ENSMUST00000185437 460 ntBASIC7.79□□□□□ -1.16
Trim42Q9D2H5 1700016G22Rik-202ENSMUST00000186843 594 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Trim42Q9D2H5 Gm29145-201ENSMUST00000189914 456 ntBASIC7.79□□□□□ -1.16
Trim42Q9D2H5 Gm28133-202ENSMUST00000191344 1158 ntTSL 5 BASIC7.79□□□□□ -1.16
Trim42Q9D2H5 Gm37622-201ENSMUST00000192162 285 ntTSL 5 BASIC7.79□□□□□ -1.16
Trim42Q9D2H5 Obox4-ps7-201ENSMUST00000196144 505 ntBASIC7.79□□□□□ -1.16
Trim42Q9D2H5 4933417G07Rik-201ENSMUST00000199681 1137 ntBASIC7.79□□□□□ -1.16
Trim42Q9D2H5 9230114K14Rik-204ENSMUST00000199805 695 ntTSL 3 BASIC7.79□□□□□ -1.16
Trim42Q9D2H5 Gm43782-201ENSMUST00000202790 229 ntTSL 3 BASIC7.79□□□□□ -1.16
Trim42Q9D2H5 Gm6308-201ENSMUST00000203226 313 ntBASIC7.79□□□□□ -1.16
Trim42Q9D2H5 Minpp1-ps-201ENSMUST00000203344 946 ntBASIC7.79□□□□□ -1.16
Trim42Q9D2H5 Gm6072-201ENSMUST00000203989 496 ntBASIC7.79□□□□□ -1.16
Trim42Q9D2H5 4933432K03Rik-201ENSMUST00000205739 1247 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Trim42Q9D2H5 Gm17909-201ENSMUST00000207587 907 ntBASIC7.79□□□□□ -1.16
Trim42Q9D2H5 Gm12691-202ENSMUST00000222516 918 ntTSL 5 BASIC7.79□□□□□ -1.16
Trim42Q9D2H5 AC158981.1-201ENSMUST00000226943 1205 ntBASIC7.79□□□□□ -1.16
Trim42Q9D2H5 Olfr1444-201ENSMUST00000059675 1129 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
Trim42Q9D2H5 Tex37-201ENSMUST00000063456 814 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Trim42Q9D2H5 Gm17541-201ENSMUST00000080062 525 ntBASIC7.79□□□□□ -1.16
Trim42Q9D2H5 Olfr767-201ENSMUST00000082131 1086 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
Trim42Q9D2H5 Gm24150-201ENSMUST00000082759 104 ntBASIC7.79□□□□□ -1.16
Trim42Q9D2H5 Snora74a-201ENSMUST00000083715 196 ntBASIC7.79□□□□□ -1.16
Trim42Q9D2H5 Cbx3-ps4-201ENSMUST00000091531 549 ntBASIC7.79□□□□□ -1.16
Trim42Q9D2H5 Cbx3-ps5-201ENSMUST00000091545 544 ntBASIC7.79□□□□□ -1.16
Trim42Q9D2H5 Zc3h11a-201ENSMUST00000027736 4395 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Trim42Q9D2H5 Magea5-201ENSMUST00000069556 1360 ntAPPRIS P1 TSL 3 BASIC7.79□□□□□ -1.16
Trim42Q9D2H5 Birc2-202ENSMUST00000074246 3130 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Trim42Q9D2H5 C2cd3-201ENSMUST00000051777 7803 ntAPPRIS P2 TSL 5 BASIC7.79□□□□□ -1.16
Trim42Q9D2H5 Gm9125-201ENSMUST00000178458 2233 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
Trim42Q9D2H5 Vmn1r35-203ENSMUST00000227354 2319 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
Trim42Q9D2H5 Vps39-202ENSMUST00000102501 4384 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Trim42Q9D2H5 Itih5-201ENSMUST00000026886 7900 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Trim42Q9D2H5 Tmem35b-202ENSMUST00000106097 1762 ntAPPRIS ALT2 TSL 2 BASIC7.79□□□□□ -1.16
Trim42Q9D2H5 Sp1-201ENSMUST00000001326 7754 ntAPPRIS P2 TSL 1 (best) BASIC7.79□□□□□ -1.16
Trim42Q9D2H5 Dmd-202ENSMUST00000113992 1858 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Trim42Q9D2H5 Gm34184-201ENSMUST00000216477 2713 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Trim42Q9D2H5 AC156645.1-201ENSMUST00000223066 5194 ntBASIC7.79□□□□□ -1.16
Trim42Q9D2H5 Trpm7-201ENSMUST00000028843 6985 ntAPPRIS ALT1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Trim42Q9D2H5 Chn1-202ENSMUST00000102677 3760 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Trim42Q9D2H5 Muc5b-201ENSMUST00000165147 14964 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
Trim42Q9D2H5 Fmo9-202ENSMUST00000148677 2462 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Trim42Q9D2H5 Dctn5-201ENSMUST00000033156 1532 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Trim42Q9D2H5 Cntn5-204ENSMUST00000162484 3606 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Trim42Q9D2H5 Gm5084-202ENSMUST00000224064 3609 ntBASIC7.78□□□□□ -1.16
Trim42Q9D2H5 Gm3669-201ENSMUST00000126712 1846 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Trim42Q9D2H5 Gm2165-202ENSMUST00000129963 1846 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Trim42Q9D2H5 Gm2101-203ENSMUST00000133794 1846 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Trim42Q9D2H5 Gm2117-203ENSMUST00000147993 1846 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Trim42Q9D2H5 Gm35147-201ENSMUST00000208383 1820 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Trim42Q9D2H5 2010110K18Rik-201ENSMUST00000181453 2400 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Trim42Q9D2H5 Focad-201ENSMUST00000097992 5791 ntAPPRIS P2 TSL 5 BASIC7.78□□□□□ -1.16
Trim42Q9D2H5 Rpl22-201ENSMUST00000103191 474 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Trim42Q9D2H5 Igkv6-25-201ENSMUST00000103383 380 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
Trim42Q9D2H5 1700015F17Rik-201ENSMUST00000115447 710 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Trim42Q9D2H5 Msn-201ENSMUST00000117399 3842 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Trim42Q9D2H5 Gm14336-201ENSMUST00000117491 475 ntBASIC7.78□□□□□ -1.16
Trim42Q9D2H5 Gm15539-201ENSMUST00000118452 566 ntBASIC7.78□□□□□ -1.16
Trim42Q9D2H5 Gm2003-201ENSMUST00000118537 636 ntBASIC7.78□□□□□ -1.16
Trim42Q9D2H5 Gm15040-201ENSMUST00000118561 1241 ntBASIC7.78□□□□□ -1.16
Retrieved 100 of 76,532 protein–RNA pairs in 82.2 ms