Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Armc2-203ENSMUST00000160262 4810 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Scrt1Q99M85 Gcsam-201ENSMUST00000023339 3315 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
Scrt1Q99M85 Gm44116-201ENSMUST00000204269 1525 ntBASIC6.16□□□□□ -1.42
Scrt1Q99M85 Kcnj16-201ENSMUST00000106635 3671 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Scrt1Q99M85 Gtf2h1-202ENSMUST00000107644 2187 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Scrt1Q99M85 Dsg1c-201ENSMUST00000054128 4088 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Scrt1Q99M85 Gm39321-203ENSMUST00000217090 1575 ntTSL 5 BASIC6.16□□□□□ -1.42
Scrt1Q99M85 Gm13986-202ENSMUST00000148587 3469 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Scrt1Q99M85 Ttc17-201ENSMUST00000055081 3163 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Scrt1Q99M85 Gm25311-201ENSMUST00000104136 132 ntBASIC6.16□□□□□ -1.42
Scrt1Q99M85 Gm24519-201ENSMUST00000104507 132 ntBASIC6.16□□□□□ -1.42
Scrt1Q99M85 Eri2-203ENSMUST00000106523 973 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Scrt1Q99M85 Gm12439-201ENSMUST00000117162 365 ntBASIC6.16□□□□□ -1.42
Scrt1Q99M85 Gm16221-201ENSMUST00000117331 393 ntBASIC6.16□□□□□ -1.42
Scrt1Q99M85 Rpl22-ps1-201ENSMUST00000118652 386 ntBASIC6.16□□□□□ -1.42
Scrt1Q99M85 Gm12879-201ENSMUST00000120003 1182 ntBASIC6.16□□□□□ -1.42
Scrt1Q99M85 Gm13622-201ENSMUST00000120658 433 ntBASIC6.16□□□□□ -1.42
Scrt1Q99M85 4933405E24Rik-201ENSMUST00000131019 1078 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Scrt1Q99M85 1700027A07Rik-201ENSMUST00000150472 458 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Scrt1Q99M85 Gm10177-201ENSMUST00000160052 444 ntBASIC6.16□□□□□ -1.42
Scrt1Q99M85 Mpped2-201ENSMUST00000016530 1217 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Scrt1Q99M85 Gm9286-201ENSMUST00000173586 508 ntBASIC6.16□□□□□ -1.42
Scrt1Q99M85 Gm5261-201ENSMUST00000185860 713 ntBASIC6.16□□□□□ -1.42
Scrt1Q99M85 Gm29043-201ENSMUST00000186371 623 ntTSL 5 BASIC6.16□□□□□ -1.42
Scrt1Q99M85 Gm28991-201ENSMUST00000186584 543 ntTSL 5 BASIC6.16□□□□□ -1.42
Scrt1Q99M85 Gm28147-201ENSMUST00000187133 621 ntTSL 5 BASIC6.16□□□□□ -1.42
Scrt1Q99M85 Gm29206-201ENSMUST00000189321 827 ntTSL 5 BASIC6.16□□□□□ -1.42
Scrt1Q99M85 Gm29363-201ENSMUST00000189365 621 ntTSL 5 BASIC6.16□□□□□ -1.42
Scrt1Q99M85 2310046K23Rik-201ENSMUST00000193521 677 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Scrt1Q99M85 AC122844.1-201ENSMUST00000195971 107 ntBASIC6.16□□□□□ -1.42
Scrt1Q99M85 Gm42752-201ENSMUST00000198394 1106 ntBASIC6.16□□□□□ -1.42
Scrt1Q99M85 Gm43377-201ENSMUST00000201640 455 ntBASIC6.16□□□□□ -1.42
Scrt1Q99M85 Gm19065-201ENSMUST00000203269 788 ntTSL 5 BASIC6.16□□□□□ -1.42
Scrt1Q99M85 Gm44442-201ENSMUST00000204298 422 ntTSL 3 BASIC6.16□□□□□ -1.42
Scrt1Q99M85 Gm18562-201ENSMUST00000209949 915 ntBASIC6.16□□□□□ -1.42
Scrt1Q99M85 Olfr221-203ENSMUST00000214342 1062 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Scrt1Q99M85 Gm4042-201ENSMUST00000216946 637 ntBASIC6.16□□□□□ -1.42
Scrt1Q99M85 4930545H06Rik-201ENSMUST00000218225 763 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Scrt1Q99M85 Gm7413-201ENSMUST00000219498 462 ntBASIC6.16□□□□□ -1.42
Scrt1Q99M85 Olfr930-201ENSMUST00000058789 1101 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Scrt1Q99M85 Eri2-202ENSMUST00000063902 1241 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Scrt1Q99M85 Unc80-201ENSMUST00000061620 13613 ntAPPRIS P2 TSL 1 (best) BASIC6.16□□□□□ -1.42
Scrt1Q99M85 Olfr1294-202ENSMUST00000208675 1983 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
Scrt1Q99M85 Gucy2g-201ENSMUST00000069183 3690 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Scrt1Q99M85 Trim60-201ENSMUST00000048565 2670 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Scrt1Q99M85 Gm42549-201ENSMUST00000202392 7004 ntBASIC6.16□□□□□ -1.42
Scrt1Q99M85 4930553P18Rik-201ENSMUST00000201164 1659 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Scrt1Q99M85 Ppp3r2-201ENSMUST00000029991 3026 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Scrt1Q99M85 Vmn1r22-206ENSMUST00000228905 2394 ntBASIC6.16□□□□□ -1.42
Scrt1Q99M85 Ston2-201ENSMUST00000052969 9896 ntAPPRIS P2 TSL 1 (best) BASIC6.16□□□□□ -1.42
Scrt1Q99M85 B930025P03Rik-201ENSMUST00000207718 3085 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Scrt1Q99M85 Dcdc5-201ENSMUST00000037284 3093 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Scrt1Q99M85 Gm11853-201ENSMUST00000119687 1384 ntBASIC6.16□□□□□ -1.42
Scrt1Q99M85 Slc7a12-201ENSMUST00000037321 1741 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Scrt1Q99M85 Cep170-201ENSMUST00000057037 6930 ntAPPRIS P2 TSL 5 BASIC6.16□□□□□ -1.42
Scrt1Q99M85 Anks4b-201ENSMUST00000033201 3900 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Scrt1Q99M85 Cpeb4-202ENSMUST00000109412 6303 ntAPPRIS ALT1 TSL 5 BASIC6.15□□□□□ -1.42
Scrt1Q99M85 Tnik-202ENSMUST00000159308 3831 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.42
Scrt1Q99M85 Gm44022-201ENSMUST00000203708 5429 ntBASIC6.15□□□□□ -1.42
Scrt1Q99M85 4930432O09Rik-201ENSMUST00000219710 1986 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Scrt1Q99M85 Lilra6-202ENSMUST00000090689 1977 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Scrt1Q99M85 AC122356.1-202ENSMUST00000227328 2758 ntBASIC6.15□□□□□ -1.42
Scrt1Q99M85 Zfp473-204ENSMUST00000120798 3559 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.42
Scrt1Q99M85 Gal3st2c-201ENSMUST00000097632 9667 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Scrt1Q99M85 Elmo1-202ENSMUST00000180626 2020 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Scrt1Q99M85 Gm3139-203ENSMUST00000202642 2048 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Scrt1Q99M85 Hao2-201ENSMUST00000029464 2049 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Scrt1Q99M85 Mapk8-205ENSMUST00000111945 5756 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Scrt1Q99M85 Gm43750-201ENSMUST00000199027 2493 ntBASIC6.15□□□□□ -1.42
Scrt1Q99M85 Tek-201ENSMUST00000071168 4176 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.42
Scrt1Q99M85 Cast-202ENSMUST00000220738 1653 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Scrt1Q99M85 Ighv1-39-201ENSMUST00000103515 351 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
Scrt1Q99M85 Gm42674-201ENSMUST00000107330 446 ntAPPRIS P1 TSL 3 BASIC6.15□□□□□ -1.42
Scrt1Q99M85 Slc35a5-202ENSMUST00000114600 679 ntTSL 3 BASIC6.15□□□□□ -1.42
Scrt1Q99M85 Olfr602-ps1-201ENSMUST00000118403 948 ntBASIC6.15□□□□□ -1.42
Scrt1Q99M85 Gm14727-201ENSMUST00000118526 525 ntBASIC6.15□□□□□ -1.42
Scrt1Q99M85 Gm14869-201ENSMUST00000119007 884 ntBASIC6.15□□□□□ -1.42
Scrt1Q99M85 Gm12593-201ENSMUST00000120981 743 ntBASIC6.15□□□□□ -1.42
Scrt1Q99M85 Gm14721-201ENSMUST00000121381 525 ntBASIC6.15□□□□□ -1.42
Scrt1Q99M85 Gm4886-201ENSMUST00000121874 1176 ntBASIC6.15□□□□□ -1.42
Scrt1Q99M85 Gm11341-201ENSMUST00000122316 447 ntBASIC6.15□□□□□ -1.42
Scrt1Q99M85 Gm11267-201ENSMUST00000137477 1071 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Scrt1Q99M85 Gm15501-202ENSMUST00000140687 625 ntBASIC6.15□□□□□ -1.42
Scrt1Q99M85 Gm13963-201ENSMUST00000143525 892 ntTSL 3 BASIC6.15□□□□□ -1.42
Scrt1Q99M85 Gm14343-201ENSMUST00000154524 731 ntTSL 3 BASIC6.15□□□□□ -1.42
Scrt1Q99M85 Gm25117-201ENSMUST00000157194 144 ntBASIC6.15□□□□□ -1.42
Scrt1Q99M85 Gm22518-201ENSMUST00000158267 68 ntBASIC6.15□□□□□ -1.42
Scrt1Q99M85 Gm22428-201ENSMUST00000158554 132 ntBASIC6.15□□□□□ -1.42
Scrt1Q99M85 Gm15898-201ENSMUST00000162213 627 ntTSL 3 BASIC6.15□□□□□ -1.42
Scrt1Q99M85 Gm28586-201ENSMUST00000189857 456 ntBASIC6.15□□□□□ -1.42
Scrt1Q99M85 Nanog-ps2-201ENSMUST00000190988 529 ntBASIC6.15□□□□□ -1.42
Scrt1Q99M85 Gm38068-201ENSMUST00000192546 540 ntBASIC6.15□□□□□ -1.42
Scrt1Q99M85 Gm19211-201ENSMUST00000200251 1206 ntBASIC6.15□□□□□ -1.42
Scrt1Q99M85 Gm44411-201ENSMUST00000204172 349 ntBASIC6.15□□□□□ -1.42
Scrt1Q99M85 Gm45485-201ENSMUST00000211229 357 ntBASIC6.15□□□□□ -1.42
Scrt1Q99M85 Gm45486-201ENSMUST00000211767 1109 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Scrt1Q99M85 AC153847.1-201ENSMUST00000214524 353 ntBASIC6.15□□□□□ -1.42
Scrt1Q99M85 Cma2-202ENSMUST00000228263 857 ntBASIC6.15□□□□□ -1.42
Scrt1Q99M85 Olfr1502-201ENSMUST00000074221 951 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
Scrt1Q99M85 Reg1-201ENSMUST00000079926 769 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 62.4 ms