Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Gm11407-201ENSMUST00000120362 1058 ntBASIC8.13□□□□□ -1.11
Clp1Q99LI9 Olfr990-ps1-201ENSMUST00000120485 904 ntBASIC8.13□□□□□ -1.11
Clp1Q99LI9 Gm14383-201ENSMUST00000121637 386 ntBASIC8.13□□□□□ -1.11
Clp1Q99LI9 Gm13610-201ENSMUST00000128298 951 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Clp1Q99LI9 Spdya-203ENSMUST00000144142 933 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Clp1Q99LI9 Gm25669-201ENSMUST00000157699 112 ntBASIC8.13□□□□□ -1.11
Clp1Q99LI9 Gm22847-201ENSMUST00000157707 105 ntBASIC8.13□□□□□ -1.11
Clp1Q99LI9 Gm18397-201ENSMUST00000176704 587 ntBASIC8.13□□□□□ -1.11
Clp1Q99LI9 Gm27684-201ENSMUST00000183778 80 ntBASIC8.13□□□□□ -1.11
Clp1Q99LI9 Gm27159-201ENSMUST00000185132 432 ntTSL 5 BASIC8.13□□□□□ -1.11
Clp1Q99LI9 Gm18501-201ENSMUST00000185363 664 ntBASIC8.13□□□□□ -1.11
Clp1Q99LI9 Gm28817-201ENSMUST00000187598 830 ntTSL 5 BASIC8.13□□□□□ -1.11
Clp1Q99LI9 C430002N11Rik-202ENSMUST00000189067 1029 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Clp1Q99LI9 Gm31123-201ENSMUST00000192094 666 ntBASIC8.13□□□□□ -1.11
Clp1Q99LI9 Gm38102-202ENSMUST00000196428 174 ntTSL 5 BASIC8.13□□□□□ -1.11
Clp1Q99LI9 1700113A16Rik-202ENSMUST00000197172 776 ntTSL 2 BASIC8.13□□□□□ -1.11
Clp1Q99LI9 4933417G07Rik-202ENSMUST00000199732 964 ntBASIC8.13□□□□□ -1.11
Clp1Q99LI9 Olfr519-202ENSMUST00000202706 945 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
Clp1Q99LI9 Gm44785-202ENSMUST00000208294 932 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Clp1Q99LI9 AC122301.1-201ENSMUST00000219625 507 ntBASIC8.13□□□□□ -1.11
Clp1Q99LI9 Gm6150-202ENSMUST00000219888 2977 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Clp1Q99LI9 AC069562.1-201ENSMUST00000224206 434 ntBASIC8.13□□□□□ -1.11
Clp1Q99LI9 Morn5-201ENSMUST00000028256 714 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Clp1Q99LI9 Serpina3h-201ENSMUST00000049922 1239 ntTSL 5 BASIC8.13□□□□□ -1.11
Clp1Q99LI9 Olfr957-201ENSMUST00000051653 936 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
Clp1Q99LI9 Mup14-202ENSMUST00000075206 925 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Clp1Q99LI9 Olfr1014-201ENSMUST00000076250 918 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
Clp1Q99LI9 Krtap6-1-201ENSMUST00000076906 594 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
Clp1Q99LI9 Mup21-201ENSMUST00000077719 677 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Clp1Q99LI9 Gm22444-201ENSMUST00000093693 108 ntBASIC8.13□□□□□ -1.11
Clp1Q99LI9 Defb18-201ENSMUST00000097818 258 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Clp1Q99LI9 1700026J12Rik-201ENSMUST00000098226 1127 ntTSL 5 BASIC8.13□□□□□ -1.11
Clp1Q99LI9 Pvt1-202ENSMUST00000181416 3319 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Clp1Q99LI9 Zfp408-202ENSMUST00000111333 3740 ntAPPRIS P3 TSL 1 (best) BASIC8.13□□□□□ -1.11
Clp1Q99LI9 Gm37304-201ENSMUST00000193833 2886 ntBASIC8.13□□□□□ -1.11
Clp1Q99LI9 Gm9750-201ENSMUST00000142025 2017 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Clp1Q99LI9 Gm36401-201ENSMUST00000194255 2028 ntBASIC8.13□□□□□ -1.11
Clp1Q99LI9 Meis1-201ENSMUST00000068264 3196 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Clp1Q99LI9 Hrh1-203ENSMUST00000160780 2782 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
Clp1Q99LI9 Wdr27-206ENSMUST00000228330 2759 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
Clp1Q99LI9 Wdr76-202ENSMUST00000099473 2315 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Clp1Q99LI9 AC160562.1-201ENSMUST00000216170 3468 ntTSL 5 BASIC8.13□□□□□ -1.11
Clp1Q99LI9 Gm26790-201ENSMUST00000181078 2291 ntTSL 5 BASIC8.13□□□□□ -1.11
Clp1Q99LI9 Olfr43-204ENSMUST00000215550 1854 ntAPPRIS P1 TSL 3 BASIC8.13□□□□□ -1.11
Clp1Q99LI9 Clip4-201ENSMUST00000024854 4055 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Clp1Q99LI9 Gcsam-201ENSMUST00000023339 3315 ntAPPRIS P3 TSL 1 (best) BASIC8.13□□□□□ -1.11
Clp1Q99LI9 Cfap58-201ENSMUST00000066308 3345 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Clp1Q99LI9 Nphp3-207ENSMUST00000194774 4722 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
Clp1Q99LI9 Pramef20-201ENSMUST00000121109 1434 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
Clp1Q99LI9 Gm17076-201ENSMUST00000165185 1401 ntBASIC8.12□□□□□ -1.11
Clp1Q99LI9 Gm3159-202ENSMUST00000167245 1797 ntAPPRIS P5 TSL 5 BASIC8.12□□□□□ -1.11
Clp1Q99LI9 Myh10-202ENSMUST00000092984 7759 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Clp1Q99LI9 Csf3r-201ENSMUST00000030673 3160 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
Clp1Q99LI9 Cdh23-201ENSMUST00000073242 10688 ntAPPRIS ALT2 TSL 5 BASIC8.12□□□□□ -1.11
Clp1Q99LI9 Olfr806-202ENSMUST00000213239 3724 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
Clp1Q99LI9 Ociad1-203ENSMUST00000166823 3354 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Clp1Q99LI9 Chrna1-201ENSMUST00000028515 4386 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Clp1Q99LI9 Ltn1-201ENSMUST00000039449 7737 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Clp1Q99LI9 Gm43528-201ENSMUST00000199492 1674 ntBASIC8.12□□□□□ -1.11
Clp1Q99LI9 Olfr376-202ENSMUST00000120401 3342 ntAPPRIS P3 TSL 2 BASIC8.12□□□□□ -1.11
Clp1Q99LI9 Mast4-212ENSMUST00000171791 7647 ntAPPRIS ALT2 TSL 5 BASIC8.12□□□□□ -1.11
Clp1Q99LI9 Gm40778-201ENSMUST00000217825 1344 ntBASIC8.12□□□□□ -1.11
Clp1Q99LI9 AC125487.2-201ENSMUST00000219810 1300 ntBASIC8.12□□□□□ -1.11
Clp1Q99LI9 Gm42645-201ENSMUST00000201573 1627 ntBASIC8.12□□□□□ -1.11
Clp1Q99LI9 Rgn-201ENSMUST00000023832 1607 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Clp1Q99LI9 Sim1-201ENSMUST00000020071 7355 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Clp1Q99LI9 Gm43523-201ENSMUST00000197397 2878 ntBASIC8.12□□□□□ -1.11
Clp1Q99LI9 Gm25647-201ENSMUST00000101832 78 ntBASIC8.12□□□□□ -1.11
Clp1Q99LI9 Gm25823-201ENSMUST00000101995 78 ntBASIC8.12□□□□□ -1.11
Clp1Q99LI9 Ighv5-16-201ENSMUST00000103458 350 ntAPPRIS ALT2 BASIC8.12□□□□□ -1.11
Clp1Q99LI9 Rpl31-ps10-201ENSMUST00000116034 378 ntBASIC8.12□□□□□ -1.11
Clp1Q99LI9 Rpl31-ps11-201ENSMUST00000119898 377 ntBASIC8.12□□□□□ -1.11
Clp1Q99LI9 Rpl31-ps12-201ENSMUST00000119957 375 ntBASIC8.12□□□□□ -1.11
Clp1Q99LI9 Dmrtc1a-203ENSMUST00000120808 1061 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Clp1Q99LI9 Gm13221-201ENSMUST00000121712 430 ntBASIC8.12□□□□□ -1.11
Clp1Q99LI9 Gm15227-201ENSMUST00000121844 399 ntBASIC8.12□□□□□ -1.11
Clp1Q99LI9 Cbx5-203ENSMUST00000122182 1146 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Clp1Q99LI9 Gm11575-201ENSMUST00000122243 228 ntBASIC8.12□□□□□ -1.11
Clp1Q99LI9 Gm12027-201ENSMUST00000146531 949 ntTSL 5 BASIC8.12□□□□□ -1.11
Clp1Q99LI9 Gm24682-201ENSMUST00000158764 137 ntBASIC8.12□□□□□ -1.11
Clp1Q99LI9 Gm24220-201ENSMUST00000177753 79 ntBASIC8.12□□□□□ -1.11
Clp1Q99LI9 Gm25988-201ENSMUST00000177759 79 ntBASIC8.12□□□□□ -1.11
Clp1Q99LI9 Gm23471-201ENSMUST00000177886 79 ntBASIC8.12□□□□□ -1.11
Clp1Q99LI9 Gm26488-201ENSMUST00000178225 79 ntBASIC8.12□□□□□ -1.11
Clp1Q99LI9 Gm23449-201ENSMUST00000179208 79 ntBASIC8.12□□□□□ -1.11
Clp1Q99LI9 Gm25221-201ENSMUST00000180051 79 ntBASIC8.12□□□□□ -1.11
Clp1Q99LI9 Rpl31-ps25-201ENSMUST00000181557 379 ntBASIC8.12□□□□□ -1.11
Clp1Q99LI9 Rpl31-ps8-201ENSMUST00000181935 378 ntBASIC8.12□□□□□ -1.11
Clp1Q99LI9 Gm27155-201ENSMUST00000183716 898 ntBASIC8.12□□□□□ -1.11
Clp1Q99LI9 Mir8120-201ENSMUST00000185035 139 ntBASIC8.12□□□□□ -1.11
Clp1Q99LI9 Gm29008-201ENSMUST00000189387 298 ntBASIC8.12□□□□□ -1.11
Clp1Q99LI9 Gm29369-201ENSMUST00000190674 615 ntBASIC8.12□□□□□ -1.11
Clp1Q99LI9 Gm28548-201ENSMUST00000191599 409 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Clp1Q99LI9 Rpl31-206ENSMUST00000195123 356 ntTSL 3 BASIC8.12□□□□□ -1.11
Clp1Q99LI9 Gm38079-201ENSMUST00000195603 154 ntBASIC8.12□□□□□ -1.11
Clp1Q99LI9 Gm43396-201ENSMUST00000197506 706 ntBASIC8.12□□□□□ -1.11
Clp1Q99LI9 Gm43848-201ENSMUST00000198060 1247 ntBASIC8.12□□□□□ -1.11
Clp1Q99LI9 Gm44258-201ENSMUST00000204925 301 ntBASIC8.12□□□□□ -1.11
Clp1Q99LI9 AC172194.1-201ENSMUST00000214246 1020 ntTSL 5 BASIC8.12□□□□□ -1.11
Clp1Q99LI9 Gm39336-201ENSMUST00000214933 260 ntTSL 3 BASIC8.12□□□□□ -1.11
Retrieved 100 of 76,532 protein–RNA pairs in 82.6 ms