Protein–RNA interactions for Protein: Q99LF4

Rtcb, tRNA-splicing ligase RtcB homolog, mousemouse

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcbQ99LF4 Mir3473g-201ENSMUST00000183494 136 ntBASIC9.04□□□□□ -0.96
RtcbQ99LF4 Gm5268-201ENSMUST00000189212 940 ntBASIC9.04□□□□□ -0.96
RtcbQ99LF4 2310046K23Rik-201ENSMUST00000193521 677 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
RtcbQ99LF4 Gm40155-201ENSMUST00000198291 818 ntTSL 3 BASIC9.04□□□□□ -0.96
RtcbQ99LF4 Gm43895-201ENSMUST00000203219 855 ntBASIC9.04□□□□□ -0.96
RtcbQ99LF4 Gm44411-201ENSMUST00000204172 349 ntBASIC9.04□□□□□ -0.96
RtcbQ99LF4 Smarcad1-215ENSMUST00000205118 600 ntTSL 2 BASIC9.04□□□□□ -0.96
RtcbQ99LF4 AC157085.1-201ENSMUST00000216343 162 ntBASIC9.04□□□□□ -0.96
RtcbQ99LF4 Gm46124-202ENSMUST00000217260 860 ntTSL 5 BASIC9.04□□□□□ -0.96
RtcbQ99LF4 4930545H06Rik-201ENSMUST00000218225 763 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
RtcbQ99LF4 4930555G07Rik-201ENSMUST00000218226 634 ntTSL 3 BASIC9.04□□□□□ -0.96
RtcbQ99LF4 Gm2089-201ENSMUST00000218294 479 ntBASIC9.04□□□□□ -0.96
RtcbQ99LF4 Gm4928-201ENSMUST00000219622 850 ntBASIC9.04□□□□□ -0.96
RtcbQ99LF4 Gm18620-201ENSMUST00000222295 324 ntBASIC9.04□□□□□ -0.96
RtcbQ99LF4 AC134917.2-201ENSMUST00000223354 124 ntBASIC9.04□□□□□ -0.96
RtcbQ99LF4 AC132833.4-201ENSMUST00000228313 203 ntBASIC9.04□□□□□ -0.96
RtcbQ99LF4 Eri2-202ENSMUST00000063902 1241 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
RtcbQ99LF4 Olfr898-201ENSMUST00000076504 951 ntAPPRIS P2 BASIC9.04□□□□□ -0.96
RtcbQ99LF4 Mir106b-201ENSMUST00000083580 82 ntBASIC9.04□□□□□ -0.96
RtcbQ99LF4 Olfr1160-201ENSMUST00000099839 960 ntBASIC9.04□□□□□ -0.96
RtcbQ99LF4 Gm26939-201ENSMUST00000177146 2261 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
RtcbQ99LF4 Liph-202ENSMUST00000074230 3703 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
RtcbQ99LF4 Prrg1-202ENSMUST00000114025 3964 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
RtcbQ99LF4 Asb14-201ENSMUST00000090337 2062 ntAPPRIS P1 TSL 5 BASIC9.04□□□□□ -0.96
RtcbQ99LF4 Selenoi-203ENSMUST00000145167 6803 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
RtcbQ99LF4 Gm44116-201ENSMUST00000204269 1525 ntBASIC9.04□□□□□ -0.96
RtcbQ99LF4 Large1-201ENSMUST00000004497 3669 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
RtcbQ99LF4 Naca-202ENSMUST00000092048 6745 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
RtcbQ99LF4 1700093K21Rik-204ENSMUST00000169264 1320 ntAPPRIS P1 TSL 5 BASIC9.04□□□□□ -0.96
RtcbQ99LF4 Rxfp1-201ENSMUST00000078527 5382 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
RtcbQ99LF4 Gm8798-202ENSMUST00000213048 2357 ntTSL 5 BASIC9.04□□□□□ -0.96
RtcbQ99LF4 Gm43189-201ENSMUST00000196040 3069 ntBASIC9.03□□□□□ -0.96
RtcbQ99LF4 Scn11a-202ENSMUST00000215718 5899 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
RtcbQ99LF4 Ttc41-203ENSMUST00000217747 1949 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
RtcbQ99LF4 AC154522.1-201ENSMUST00000224647 1903 ntBASIC9.03□□□□□ -0.96
RtcbQ99LF4 Gm37510-201ENSMUST00000194151 4762 ntBASIC9.03□□□□□ -0.96
RtcbQ99LF4 AC187103.1-201ENSMUST00000224641 1475 ntBASIC9.03□□□□□ -0.96
RtcbQ99LF4 Ccdc114-203ENSMUST00000210602 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
RtcbQ99LF4 Nadk-201ENSMUST00000030939 2946 ntAPPRIS P2 TSL 1 (best) BASIC9.03□□□□□ -0.96
RtcbQ99LF4 Clcn3-202ENSMUST00000056508 5684 ntAPPRIS P4 TSL 1 (best) BASIC9.03□□□□□ -0.96
RtcbQ99LF4 Olfr181-201ENSMUST00000075361 1391 ntAPPRIS P1 TSL 2 BASIC9.03□□□□□ -0.96
RtcbQ99LF4 Prcp-202ENSMUST00000207594 2245 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
RtcbQ99LF4 AC101875.1-201ENSMUST00000222666 2223 ntBASIC9.03□□□□□ -0.96
RtcbQ99LF4 Gm26429-201ENSMUST00000104829 110 ntBASIC9.03□□□□□ -0.96
RtcbQ99LF4 Zfp973-201ENSMUST00000108985 1295 ntAPPRIS P1 TSL 5 BASIC9.03□□□□□ -0.96
RtcbQ99LF4 Gm12844-201ENSMUST00000119463 582 ntBASIC9.03□□□□□ -0.96
RtcbQ99LF4 Sult1b1-203ENSMUST00000120150 1213 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
RtcbQ99LF4 Gm11472-201ENSMUST00000121305 556 ntBASIC9.03□□□□□ -0.96
RtcbQ99LF4 Gm14435-202ENSMUST00000127687 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
RtcbQ99LF4 Gm2709-201ENSMUST00000142979 350 ntBASIC9.03□□□□□ -0.96
RtcbQ99LF4 Gm15934-201ENSMUST00000162062 525 ntTSL 2 BASIC9.03□□□□□ -0.96
RtcbQ99LF4 Gm2916-201ENSMUST00000178392 384 ntAPPRIS P1 TSL 5 BASIC9.03□□□□□ -0.96
RtcbQ99LF4 Gm10410-201ENSMUST00000180138 384 ntBASIC9.03□□□□□ -0.96
RtcbQ99LF4 Gm26898-201ENSMUST00000181678 384 ntBASIC9.03□□□□□ -0.96
RtcbQ99LF4 Gm27804-201ENSMUST00000185135 119 ntBASIC9.03□□□□□ -0.96
RtcbQ99LF4 Gm29206-201ENSMUST00000189321 827 ntTSL 5 BASIC9.03□□□□□ -0.96
RtcbQ99LF4 Gm19002-201ENSMUST00000192649 1012 ntBASIC9.03□□□□□ -0.96
RtcbQ99LF4 Gm38039-201ENSMUST00000195328 443 ntTSL 5 BASIC9.03□□□□□ -0.96
RtcbQ99LF4 Gm42593-201ENSMUST00000198469 377 ntBASIC9.03□□□□□ -0.96
RtcbQ99LF4 Gm7663-201ENSMUST00000201151 1240 ntBASIC9.03□□□□□ -0.96
RtcbQ99LF4 Fxyd4-204ENSMUST00000203433 670 ntTSL 3 BASIC9.03□□□□□ -0.96
RtcbQ99LF4 Gm44566-201ENSMUST00000207638 304 ntBASIC9.03□□□□□ -0.96
RtcbQ99LF4 Gm2221-201ENSMUST00000209342 418 ntBASIC9.03□□□□□ -0.96
RtcbQ99LF4 Olfr574-202ENSMUST00000211329 1039 ntAPPRIS ALT2 BASIC9.03□□□□□ -0.96
RtcbQ99LF4 Gm20234-201ENSMUST00000214134 717 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
RtcbQ99LF4 AC153955.1-201ENSMUST00000217458 663 ntTSL 3 BASIC9.03□□□□□ -0.96
RtcbQ99LF4 AC159242.1-201ENSMUST00000225832 194 ntBASIC9.03□□□□□ -0.96
RtcbQ99LF4 AC123665.3-201ENSMUST00000228735 1216 ntBASIC9.03□□□□□ -0.96
RtcbQ99LF4 Dlgap5-201ENSMUST00000043296 2964 ntAPPRIS P2 TSL 1 (best) BASIC9.03□□□□□ -0.96
RtcbQ99LF4 Olfr574-201ENSMUST00000052997 1041 ntAPPRIS P2 BASIC9.03□□□□□ -0.96
RtcbQ99LF4 Olfr1145-201ENSMUST00000079711 945 ntAPPRIS ALT2 BASIC9.03□□□□□ -0.96
RtcbQ99LF4 Zfp790-201ENSMUST00000032796 3376 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
RtcbQ99LF4 Knstrn-206ENSMUST00000134661 4602 ntAPPRIS P2 TSL 1 (best) BASIC9.03□□□□□ -0.96
RtcbQ99LF4 Gm37150-201ENSMUST00000193900 2754 ntBASIC9.03□□□□□ -0.96
RtcbQ99LF4 Gm37902-201ENSMUST00000192839 1683 ntBASIC9.03□□□□□ -0.96
RtcbQ99LF4 Gm44581-201ENSMUST00000206227 1693 ntTSL 5 BASIC9.03□□□□□ -0.96
RtcbQ99LF4 Tmc2-202ENSMUST00000166774 2667 ntAPPRIS P1 TSL 2 BASIC9.03□□□□□ -0.96
RtcbQ99LF4 Rab39b-201ENSMUST00000033545 3401 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
RtcbQ99LF4 Paqr7-202ENSMUST00000095074 3550 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
RtcbQ99LF4 Pfkfb2-203ENSMUST00000169659 2849 ntAPPRIS P3 TSL 1 (best) BASIC9.03□□□□□ -0.96
RtcbQ99LF4 Gm38302-201ENSMUST00000191676 2076 ntBASIC9.03□□□□□ -0.96
RtcbQ99LF4 Gm3669-201ENSMUST00000126712 1846 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
RtcbQ99LF4 Gm2165-202ENSMUST00000129963 1846 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
RtcbQ99LF4 Gm2101-203ENSMUST00000133794 1846 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
RtcbQ99LF4 Gm2117-203ENSMUST00000147993 1846 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
RtcbQ99LF4 Kcne4-202ENSMUST00000187432 1813 ntTSL 5 BASIC9.03□□□□□ -0.96
RtcbQ99LF4 Gm42514-201ENSMUST00000196636 1832 ntBASIC9.03□□□□□ -0.96
RtcbQ99LF4 Zfp317-201ENSMUST00000079042 1824 ntAPPRIS P1 TSL 2 BASIC9.03□□□□□ -0.96
RtcbQ99LF4 Gm26645-201ENSMUST00000181076 1316 ntBASIC9.03□□□□□ -0.96
RtcbQ99LF4 Pomk-201ENSMUST00000061850 3613 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
RtcbQ99LF4 4930528G23Rik-201ENSMUST00000124575 1723 ntTSL 1 (best) BASIC9.02□□□□□ -0.96
RtcbQ99LF4 Ctsm-201ENSMUST00000099451 1457 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.96
RtcbQ99LF4 Gsdmc-202ENSMUST00000173503 2375 ntAPPRIS ALT2 TSL 5 BASIC9.02□□□□□ -0.96
RtcbQ99LF4 Tubgcp5-201ENSMUST00000032627 3905 ntAPPRIS P2 TSL 1 (best) BASIC9.02□□□□□ -0.96
RtcbQ99LF4 Crnn-203ENSMUST00000195515 1863 ntAPPRIS P1 TSL 5 BASIC9.02□□□□□ -0.96
RtcbQ99LF4 Meis1-201ENSMUST00000068264 3196 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.96
RtcbQ99LF4 Smc5-201ENSMUST00000087556 5683 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.97
RtcbQ99LF4 Ms4a6b-205ENSMUST00000163078 2680 ntAPPRIS P1 TSL 5 BASIC9.02□□□□□ -0.97
RtcbQ99LF4 Vmn1r51-213ENSMUST00000228880 4353 ntAPPRIS P1 BASIC9.02□□□□□ -0.97
RtcbQ99LF4 Pogz-203ENSMUST00000107266 4100 ntAPPRIS ALT2 TSL 5 BASIC9.02□□□□□ -0.97
Retrieved 100 of 76,532 protein–RNA pairs in 163.7 ms