Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 St18-212ENSMUST00000151281 3533 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Ccdc28bQ8CEG5 Hivep3-202ENSMUST00000106307 11838 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Ccdc28bQ8CEG5 Mgam-206ENSMUST00000202779 3821 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Ccdc28bQ8CEG5 Slc9a4-201ENSMUST00000027233 3962 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Ccdc28bQ8CEG5 Atp8b4-202ENSMUST00000040149 3986 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Ccdc28bQ8CEG5 BC053393-201ENSMUST00000050937 2020 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Ccdc28bQ8CEG5 F830016B08Rik-201ENSMUST00000171297 3297 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Ccdc28bQ8CEG5 Rfx4-203ENSMUST00000095388 3274 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Ccdc28bQ8CEG5 Macrod2os2-201ENSMUST00000143227 3566 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Ccdc28bQ8CEG5 Gm14615-201ENSMUST00000117575 1816 ntBASIC6.8□□□□□ -1.32
Ccdc28bQ8CEG5 Tbp-211ENSMUST00000162505 12794 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Ccdc28bQ8CEG5 Gm38257-201ENSMUST00000195881 2761 ntBASIC6.8□□□□□ -1.32
Ccdc28bQ8CEG5 Grm8-202ENSMUST00000115323 3856 ntAPPRIS P3 TSL 1 (best) BASIC6.8□□□□□ -1.32
Ccdc28bQ8CEG5 Spata22-201ENSMUST00000117445 3200 ntAPPRIS P1 TSL 2 BASIC6.8□□□□□ -1.32
Ccdc28bQ8CEG5 Ptprc-204ENSMUST00000182755 4611 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
Ccdc28bQ8CEG5 Sytl2-206ENSMUST00000190731 3838 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
Ccdc28bQ8CEG5 Gm12258-202ENSMUST00000139337 4100 ntAPPRIS P1 TSL 2 BASIC6.8□□□□□ -1.32
Ccdc28bQ8CEG5 Serpinb1c-201ENSMUST00000021834 1633 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
Ccdc28bQ8CEG5 Stat1-201ENSMUST00000070968 5151 ntAPPRIS P2 TSL 1 (best) BASIC6.8□□□□□ -1.32
Ccdc28bQ8CEG5 Spic-201ENSMUST00000004473 1763 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Ccdc28bQ8CEG5 Zscan18-201ENSMUST00000046245 3626 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
Ccdc28bQ8CEG5 Msantd4-202ENSMUST00000212075 2800 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Ccdc28bQ8CEG5 4932435O22Rik-202ENSMUST00000148405 3406 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Ccdc28bQ8CEG5 Qsox2-202ENSMUST00000091263 4011 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Ccdc28bQ8CEG5 Ighv5-15-201ENSMUST00000103457 350 ntAPPRIS ALT2 BASIC6.8□□□□□ -1.32
Ccdc28bQ8CEG5 Zfp966-202ENSMUST00000109018 733 ntTSL 3 BASIC6.8□□□□□ -1.32
Ccdc28bQ8CEG5 Zfp968-202ENSMUST00000109048 733 ntTSL 3 BASIC6.8□□□□□ -1.32
Ccdc28bQ8CEG5 Gm14053-201ENSMUST00000121662 470 ntBASIC6.8□□□□□ -1.32
Ccdc28bQ8CEG5 Spag17os-202ENSMUST00000145279 3219 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Ccdc28bQ8CEG5 BC046251-201ENSMUST00000154632 3653 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Ccdc28bQ8CEG5 Gm4835-201ENSMUST00000155839 972 ntBASIC6.8□□□□□ -1.32
Ccdc28bQ8CEG5 Gm26486-201ENSMUST00000158021 110 ntBASIC6.8□□□□□ -1.32
Ccdc28bQ8CEG5 Gm22670-201ENSMUST00000158724 143 ntBASIC6.8□□□□□ -1.32
Ccdc28bQ8CEG5 Rpl29-ps1-201ENSMUST00000161849 508 ntBASIC6.8□□□□□ -1.32
Ccdc28bQ8CEG5 Slc25a5-ps-201ENSMUST00000162199 826 ntBASIC6.8□□□□□ -1.32
Ccdc28bQ8CEG5 Obox3-ps4-201ENSMUST00000176026 1005 ntBASIC6.8□□□□□ -1.32
Ccdc28bQ8CEG5 Mir6415-201ENSMUST00000184064 100 ntBASIC6.8□□□□□ -1.32
Ccdc28bQ8CEG5 Gm18033-201ENSMUST00000186678 550 ntBASIC6.8□□□□□ -1.32
Ccdc28bQ8CEG5 Gm37382-201ENSMUST00000193032 1596 ntBASIC6.8□□□□□ -1.32
Ccdc28bQ8CEG5 Ighv5-1-201ENSMUST00000193324 353 ntBASIC6.8□□□□□ -1.32
Ccdc28bQ8CEG5 Gm37273-201ENSMUST00000195132 539 ntTSL 2 BASIC6.8□□□□□ -1.32
Ccdc28bQ8CEG5 Gm43088-201ENSMUST00000197530 2347 ntBASIC6.8□□□□□ -1.32
Ccdc28bQ8CEG5 Gm42734-201ENSMUST00000201656 878 ntBASIC6.8□□□□□ -1.32
Ccdc28bQ8CEG5 Mypopos-203ENSMUST00000206304 441 ntTSL 3 BASIC6.8□□□□□ -1.32
Ccdc28bQ8CEG5 Gm7151-201ENSMUST00000211511 954 ntBASIC6.8□□□□□ -1.32
Ccdc28bQ8CEG5 Rps2-ps12-201ENSMUST00000214262 785 ntBASIC6.8□□□□□ -1.32
Ccdc28bQ8CEG5 Olfr55-203ENSMUST00000214891 4428 ntTSL 5 BASIC6.8□□□□□ -1.32
Ccdc28bQ8CEG5 Gm40645-202ENSMUST00000219828 874 ntTSL 5 BASIC6.8□□□□□ -1.32
Ccdc28bQ8CEG5 AC134869.2-201ENSMUST00000225788 421 ntBASIC6.8□□□□□ -1.32
Ccdc28bQ8CEG5 AC138765.3-201ENSMUST00000227981 423 ntBASIC6.8□□□□□ -1.32
Ccdc28bQ8CEG5 Rhox4b-201ENSMUST00000096458 887 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Ccdc28bQ8CEG5 Cd274-201ENSMUST00000016640 3622 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Ccdc28bQ8CEG5 Gm37530-201ENSMUST00000191759 4932 ntBASIC6.8□□□□□ -1.32
Ccdc28bQ8CEG5 Psg16-202ENSMUST00000118367 2282 ntAPPRIS P3 TSL 1 (best) BASIC6.8□□□□□ -1.32
Ccdc28bQ8CEG5 Bmp10-201ENSMUST00000032125 4490 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Ccdc28bQ8CEG5 Amer1-201ENSMUST00000084535 8496 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Ccdc28bQ8CEG5 Scn1a-201ENSMUST00000077489 8116 ntAPPRIS P3 TSL 5 BASIC6.8□□□□□ -1.32
Ccdc28bQ8CEG5 Zkscan7-204ENSMUST00000214957 5650 ntTSL 2 BASIC6.8□□□□□ -1.32
Ccdc28bQ8CEG5 Olfr596-202ENSMUST00000214577 3392 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
Ccdc28bQ8CEG5 Zc4h2-201ENSMUST00000044382 2219 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Ccdc28bQ8CEG5 BC080695-202ENSMUST00000105774 2095 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Ccdc28bQ8CEG5 Olfr527-202ENSMUST00000214143 3094 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
Ccdc28bQ8CEG5 4921534A09Rik-201ENSMUST00000213976 2495 ntBASIC6.79□□□□□ -1.32
Ccdc28bQ8CEG5 Olfr90-205ENSMUST00000216488 3188 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
Ccdc28bQ8CEG5 AC121094.1-201ENSMUST00000224766 1345 ntBASIC6.79□□□□□ -1.32
Ccdc28bQ8CEG5 Xrn1-201ENSMUST00000034981 5499 ntAPPRIS P3 TSL 1 (best) BASIC6.79□□□□□ -1.32
Ccdc28bQ8CEG5 Fap-209ENSMUST00000174448 2271 ntAPPRIS ALT2 TSL 5 BASIC6.79□□□□□ -1.32
Ccdc28bQ8CEG5 Pde1c-208ENSMUST00000170774 2132 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Ccdc28bQ8CEG5 Olfr1115-202ENSMUST00000213513 3604 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
Ccdc28bQ8CEG5 Olfr1353-201ENSMUST00000039718 1992 ntAPPRIS P1 TSL 2 BASIC6.79□□□□□ -1.32
Ccdc28bQ8CEG5 Zbtb37-206ENSMUST00000172044 3883 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Ccdc28bQ8CEG5 Ccdc186-201ENSMUST00000076085 2754 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Ccdc28bQ8CEG5 Gm1587-201ENSMUST00000100372 372 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Ccdc28bQ8CEG5 Gm23701-201ENSMUST00000103893 110 ntBASIC6.79□□□□□ -1.32
Ccdc28bQ8CEG5 Fancl-202ENSMUST00000109509 1187 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Ccdc28bQ8CEG5 Gm11462-201ENSMUST00000117749 562 ntBASIC6.79□□□□□ -1.32
Ccdc28bQ8CEG5 Gm12740-201ENSMUST00000118794 308 ntBASIC6.79□□□□□ -1.32
Ccdc28bQ8CEG5 Gm12642-201ENSMUST00000121098 876 ntBASIC6.79□□□□□ -1.32
Ccdc28bQ8CEG5 Apol11a-201ENSMUST00000172191 1132 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
Ccdc28bQ8CEG5 Lemd1-209ENSMUST00000191418 726 ntAPPRIS ALT2 TSL 2 BASIC6.79□□□□□ -1.32
Ccdc28bQ8CEG5 Pilrb2-202ENSMUST00000196162 969 ntAPPRIS ALT2 TSL 1 (best) BASIC6.79□□□□□ -1.32
Ccdc28bQ8CEG5 Gm42431-201ENSMUST00000196880 323 ntBASIC6.79□□□□□ -1.32
Ccdc28bQ8CEG5 AI506816-201ENSMUST00000197153 474 ntTSL 5 BASIC6.79□□□□□ -1.32
Ccdc28bQ8CEG5 U90926-202ENSMUST00000201332 524 ntAPPRIS P5 TSL 1 (best) BASIC6.79□□□□□ -1.32
Ccdc28bQ8CEG5 Olfr1284-202ENSMUST00000209096 1064 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
Ccdc28bQ8CEG5 4930567H12Rik-202ENSMUST00000212512 766 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Ccdc28bQ8CEG5 Gm18292-201ENSMUST00000216673 919 ntBASIC6.79□□□□□ -1.32
Ccdc28bQ8CEG5 Gm31497-201ENSMUST00000216981 638 ntTSL 5 BASIC6.79□□□□□ -1.32
Ccdc28bQ8CEG5 AC163041.1-201ENSMUST00000221984 133 ntBASIC6.79□□□□□ -1.32
Ccdc28bQ8CEG5 Cacna2d3-208ENSMUST00000225985 918 ntBASIC6.79□□□□□ -1.32
Ccdc28bQ8CEG5 AC159267.1-201ENSMUST00000226702 678 ntBASIC6.79□□□□□ -1.32
Ccdc28bQ8CEG5 Tmem253-204ENSMUST00000228408 415 ntAPPRIS ALT2 BASIC6.79□□□□□ -1.32
Ccdc28bQ8CEG5 Gm8186-201ENSMUST00000053575 386 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
Ccdc28bQ8CEG5 Snora21-201ENSMUST00000082967 137 ntBASIC6.79□□□□□ -1.32
Ccdc28bQ8CEG5 n-R5s60-201ENSMUST00000083299 119 ntBASIC6.79□□□□□ -1.32
Ccdc28bQ8CEG5 Sorbs2-209ENSMUST00000132139 4644 ntAPPRIS ALT2 TSL 5 BASIC6.79□□□□□ -1.32
Ccdc28bQ8CEG5 Fcrl5-202ENSMUST00000166297 1527 ntAPPRIS ALT2 TSL 5 BASIC6.79□□□□□ -1.32
Ccdc28bQ8CEG5 Myt1l-202ENSMUST00000049784 7202 ntAPPRIS P4 TSL 1 (best) BASIC6.79□□□□□ -1.32
Ccdc28bQ8CEG5 Psd3-201ENSMUST00000038959 11319 ntAPPRIS ALT2 TSL 5 BASIC6.79□□□□□ -1.32
Ccdc28bQ8CEG5 AC130217.2-201ENSMUST00000224009 2990 ntBASIC6.79□□□□□ -1.32
Retrieved 100 of 76,532 protein–RNA pairs in 57.6 ms