Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Fcer1a-202ENSMUST00000193017 826 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Nup88Q8CEC0 Gm42782-201ENSMUST00000197286 522 ntBASIC8.15□□□□□ -1.1
Nup88Q8CEC0 Klrb1-ps1-202ENSMUST00000203057 414 ntTSL 5 BASIC8.15□□□□□ -1.1
Nup88Q8CEC0 Tecr-214ENSMUST00000212990 648 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Nup88Q8CEC0 Gm5119-201ENSMUST00000215858 634 ntBASIC8.15□□□□□ -1.1
Nup88Q8CEC0 D830013O20Rik-202ENSMUST00000221180 683 ntTSL 2 BASIC8.15□□□□□ -1.1
Nup88Q8CEC0 Gm8075-202ENSMUST00000223088 682 ntTSL 5 BASIC8.15□□□□□ -1.1
Nup88Q8CEC0 Gm26130-201ENSMUST00000083171 138 ntBASIC8.15□□□□□ -1.1
Nup88Q8CEC0 Adgrg4-201ENSMUST00000096431 1137 ntTSL 2 BASIC8.15□□□□□ -1.1
Nup88Q8CEC0 Scyl3-203ENSMUST00000161908 3718 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.1
Nup88Q8CEC0 Pole-201ENSMUST00000007296 7163 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Nup88Q8CEC0 4930594C11Rik-201ENSMUST00000192316 2755 ntBASIC8.15□□□□□ -1.11
Nup88Q8CEC0 A4gnt-201ENSMUST00000042553 2757 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
Nup88Q8CEC0 Mef2c-227ENSMUST00000199432 3498 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
Nup88Q8CEC0 Vcam1-203ENSMUST00000196449 2532 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Nup88Q8CEC0 4930553P18Rik-201ENSMUST00000201164 1659 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Nup88Q8CEC0 AC121286.2-201ENSMUST00000218069 2470 ntBASIC8.14□□□□□ -1.11
Nup88Q8CEC0 Bank1-201ENSMUST00000041577 3268 ntAPPRIS P3 TSL 1 (best) BASIC8.14□□□□□ -1.11
Nup88Q8CEC0 Dthd1-201ENSMUST00000170704 2427 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
Nup88Q8CEC0 Gm21781-201ENSMUST00000178920 4838 ntBASIC8.14□□□□□ -1.11
Nup88Q8CEC0 Ncoa2-202ENSMUST00000068304 8006 ntTSL 5 BASIC8.14□□□□□ -1.11
Nup88Q8CEC0 Vmn1r52-204ENSMUST00000227578 2370 ntBASIC8.14□□□□□ -1.11
Nup88Q8CEC0 Trpm7-201ENSMUST00000028843 6985 ntAPPRIS ALT1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Nup88Q8CEC0 Olfr1247-203ENSMUST00000216424 2164 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
Nup88Q8CEC0 Zfp280d-203ENSMUST00000183410 4200 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
Nup88Q8CEC0 Gm44231-201ENSMUST00000204106 4075 ntBASIC8.14□□□□□ -1.11
Nup88Q8CEC0 Trdv2-2-201ENSMUST00000103678 397 ntAPPRIS P1 BASIC8.14□□□□□ -1.11
Nup88Q8CEC0 Trdv4-201ENSMUST00000103679 444 ntAPPRIS P1 BASIC8.14□□□□□ -1.11
Nup88Q8CEC0 Gm25379-201ENSMUST00000104338 114 ntBASIC8.14□□□□□ -1.11
Nup88Q8CEC0 Krtap9-5-201ENSMUST00000105052 1077 ntAPPRIS P1 BASIC8.14□□□□□ -1.11
Nup88Q8CEC0 Gm15203-201ENSMUST00000117668 455 ntBASIC8.14□□□□□ -1.11
Nup88Q8CEC0 Rps12-ps5-201ENSMUST00000118272 389 ntBASIC8.14□□□□□ -1.11
Nup88Q8CEC0 Gm14727-201ENSMUST00000118526 525 ntBASIC8.14□□□□□ -1.11
Nup88Q8CEC0 Gm14796-201ENSMUST00000121216 959 ntBASIC8.14□□□□□ -1.11
Nup88Q8CEC0 Gm14721-201ENSMUST00000121381 525 ntBASIC8.14□□□□□ -1.11
Nup88Q8CEC0 Speer3-201ENSMUST00000124677 1192 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Nup88Q8CEC0 Gm28070-201ENSMUST00000191502 445 ntBASIC8.14□□□□□ -1.11
Nup88Q8CEC0 Gm37679-201ENSMUST00000192868 1192 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Nup88Q8CEC0 Gm9710-201ENSMUST00000198053 499 ntBASIC8.14□□□□□ -1.11
Nup88Q8CEC0 Gm43849-201ENSMUST00000201086 215 ntBASIC8.14□□□□□ -1.11
Nup88Q8CEC0 Gpn1-206ENSMUST00000202394 631 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Nup88Q8CEC0 Olfr587-ps1-202ENSMUST00000209201 477 ntBASIC8.14□□□□□ -1.11
Nup88Q8CEC0 AC124489.1-201ENSMUST00000225852 526 ntBASIC8.14□□□□□ -1.11
Nup88Q8CEC0 Olfr922-201ENSMUST00000051004 1132 ntAPPRIS P1 BASIC8.14□□□□□ -1.11
Nup88Q8CEC0 Klre1-201ENSMUST00000053708 1294 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Nup88Q8CEC0 Hbb-bh1-201ENSMUST00000063957 613 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Nup88Q8CEC0 Gm24036-201ENSMUST00000082868 156 ntBASIC8.14□□□□□ -1.11
Nup88Q8CEC0 Gm5446-201ENSMUST00000091762 784 ntBASIC8.14□□□□□ -1.11
Nup88Q8CEC0 Gm42630-201ENSMUST00000195908 3448 ntBASIC8.14□□□□□ -1.11
Nup88Q8CEC0 Fam49a-202ENSMUST00000069066 9452 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Nup88Q8CEC0 Gm10568-201ENSMUST00000193244 1634 ntBASIC8.14□□□□□ -1.11
Nup88Q8CEC0 4930548H24Rik-201ENSMUST00000031020 1641 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Nup88Q8CEC0 Nlrp1a-202ENSMUST00000108518 3767 ntAPPRIS P2 TSL 5 BASIC8.14□□□□□ -1.11
Nup88Q8CEC0 Rubcnl-201ENSMUST00000036072 2651 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Nup88Q8CEC0 Vmn1r218-204ENSMUST00000227160 9558 ntAPPRIS ALT2 BASIC8.14□□□□□ -1.11
Nup88Q8CEC0 Chm-202ENSMUST00000113388 4749 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Nup88Q8CEC0 Gm28965-201ENSMUST00000186015 1500 ntTSL 5 BASIC8.13□□□□□ -1.11
Nup88Q8CEC0 Gm15950-201ENSMUST00000162902 1973 ntBASIC8.13□□□□□ -1.11
Nup88Q8CEC0 Nr1h5-203ENSMUST00000196983 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
Nup88Q8CEC0 Ndnf-201ENSMUST00000054351 10101 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Nup88Q8CEC0 Olfr1264-202ENSMUST00000216616 4311 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
Nup88Q8CEC0 Gm44769-201ENSMUST00000206120 2809 ntBASIC8.13□□□□□ -1.11
Nup88Q8CEC0 Mlh3-203ENSMUST00000220854 4699 ntAPPRIS ALT2 TSL 5 BASIC8.13□□□□□ -1.11
Nup88Q8CEC0 Gm29123-201ENSMUST00000185808 3657 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Nup88Q8CEC0 Gm27179-201ENSMUST00000184652 3017 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Nup88Q8CEC0 9930111J21Rik2-202ENSMUST00000101295 5985 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Nup88Q8CEC0 Gm13878-201ENSMUST00000117986 577 ntBASIC8.13□□□□□ -1.11
Nup88Q8CEC0 Gm14158-201ENSMUST00000118409 308 ntBASIC8.13□□□□□ -1.11
Nup88Q8CEC0 Gm13940-201ENSMUST00000121023 301 ntBASIC8.13□□□□□ -1.11
Nup88Q8CEC0 Gm11916-201ENSMUST00000132759 650 ntTSL 2 BASIC8.13□□□□□ -1.11
Nup88Q8CEC0 1700021L23Rik-201ENSMUST00000153719 726 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Nup88Q8CEC0 Gm12863-201ENSMUST00000155069 536 ntTSL 2 BASIC8.13□□□□□ -1.11
Nup88Q8CEC0 Gm18191-201ENSMUST00000174624 824 ntBASIC8.13□□□□□ -1.11
Nup88Q8CEC0 Gm26863-201ENSMUST00000181144 624 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Nup88Q8CEC0 Mir378d-201ENSMUST00000184232 110 ntBASIC8.13□□□□□ -1.11
Nup88Q8CEC0 Gm19480-201ENSMUST00000185547 667 ntBASIC8.13□□□□□ -1.11
Nup88Q8CEC0 Gm29357-201ENSMUST00000186877 698 ntBASIC8.13□□□□□ -1.11
Nup88Q8CEC0 Gm18352-201ENSMUST00000189113 902 ntBASIC8.13□□□□□ -1.11
Nup88Q8CEC0 Gm29605-201ENSMUST00000190800 292 ntBASIC8.13□□□□□ -1.11
Nup88Q8CEC0 Gm44613-201ENSMUST00000205637 877 ntTSL 5 BASIC8.13□□□□□ -1.11
Nup88Q8CEC0 Gm44613-202ENSMUST00000205962 691 ntTSL 3 BASIC8.13□□□□□ -1.11
Nup88Q8CEC0 Rfpl4-203ENSMUST00000208468 1238 ntAPPRIS ALT2 TSL 2 BASIC8.13□□□□□ -1.11
Nup88Q8CEC0 Olfr48-202ENSMUST00000214428 3848 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
Nup88Q8CEC0 Spata31-202ENSMUST00000221202 814 ntTSL 5 BASIC8.13□□□□□ -1.11
Nup88Q8CEC0 Slxl1-201ENSMUST00000088740 730 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Nup88Q8CEC0 Cul5-202ENSMUST00000120122 5945 ntTSL 5 BASIC8.13□□□□□ -1.11
Nup88Q8CEC0 Plce1-203ENSMUST00000182267 7234 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
Nup88Q8CEC0 Abca8b-201ENSMUST00000020948 7423 ntAPPRIS P2 TSL 1 (best) BASIC8.13□□□□□ -1.11
Nup88Q8CEC0 Pln-201ENSMUST00000046221 2334 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Nup88Q8CEC0 Gm5512-202ENSMUST00000220222 1522 ntBASIC8.13□□□□□ -1.11
Nup88Q8CEC0 Wdr35-202ENSMUST00000111113 4312 ntAPPRIS ALT1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Nup88Q8CEC0 Golph3l-207ENSMUST00000177390 2836 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Nup88Q8CEC0 Gm20489-201ENSMUST00000117736 1350 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
Nup88Q8CEC0 Psg18-201ENSMUST00000003597 1659 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Nup88Q8CEC0 Olfr1294-202ENSMUST00000208675 1983 ntAPPRIS P1 TSL 2 BASIC8.12□□□□□ -1.11
Nup88Q8CEC0 Celf2-226ENSMUST00000183209 3852 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Nup88Q8CEC0 Plcb1-201ENSMUST00000070724 3853 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Nup88Q8CEC0 4930405D11Rik-203ENSMUST00000142521 645 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Nup88Q8CEC0 0610043K17Rik-202ENSMUST00000142581 372 ntTSL 2 BASIC8.12□□□□□ -1.11
Nup88Q8CEC0 Gm25617-201ENSMUST00000179548 133 ntBASIC8.12□□□□□ -1.11
Retrieved 100 of 76,532 protein–RNA pairs in 99.4 ms