Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Zc3h12b-201ENSMUST00000082183 2831 ntAPPRIS P1 TSL 5 BASIC8.18□□□□□ -1.1
Vps53Q8CCB4 Mroh4-201ENSMUST00000023271 3583 ntAPPRIS P2 TSL 1 (best) BASIC8.18□□□□□ -1.1
Vps53Q8CCB4 Gm8276-201ENSMUST00000192231 1812 ntBASIC8.18□□□□□ -1.1
Vps53Q8CCB4 Ssbp1-202ENSMUST00000114779 4398 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Vps53Q8CCB4 Vmn1r44-204ENSMUST00000226171 1877 ntBASIC8.18□□□□□ -1.1
Vps53Q8CCB4 Trbv13-3-201ENSMUST00000103271 340 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
Vps53Q8CCB4 Igkv4-81-201ENSMUST00000103340 290 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
Vps53Q8CCB4 Ighv1-18-201ENSMUST00000103504 306 ntAPPRIS ALT2 BASIC8.18□□□□□ -1.1
Vps53Q8CCB4 Gm15484-201ENSMUST00000118871 828 ntBASIC8.18□□□□□ -1.1
Vps53Q8CCB4 Gm13900-201ENSMUST00000119402 498 ntBASIC8.18□□□□□ -1.1
Vps53Q8CCB4 Gm13221-201ENSMUST00000121712 430 ntBASIC8.18□□□□□ -1.1
Vps53Q8CCB4 Hmgb4os-201ENSMUST00000131581 518 ntTSL 5 BASIC8.18□□□□□ -1.1
Vps53Q8CCB4 Phf11d-203ENSMUST00000161031 1130 ntAPPRIS ALT2 TSL 2 BASIC8.18□□□□□ -1.1
Vps53Q8CCB4 Slc25a5-ps-201ENSMUST00000162199 826 ntBASIC8.18□□□□□ -1.1
Vps53Q8CCB4 Gm23139-201ENSMUST00000179454 132 ntBASIC8.18□□□□□ -1.1
Vps53Q8CCB4 Gm26901-201ENSMUST00000181554 1193 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Vps53Q8CCB4 Mir7084-201ENSMUST00000183876 70 ntBASIC8.18□□□□□ -1.1
Vps53Q8CCB4 Mir8105-201ENSMUST00000184718 89 ntBASIC8.18□□□□□ -1.1
Vps53Q8CCB4 Gm37973-201ENSMUST00000195767 1289 ntBASIC8.18□□□□□ -1.1
Vps53Q8CCB4 Fabp7-201ENSMUST00000020024 804 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Vps53Q8CCB4 Zfp799-203ENSMUST00000201876 632 ntTSL 3 BASIC8.18□□□□□ -1.1
Vps53Q8CCB4 Gm44983-201ENSMUST00000208121 463 ntTSL 3 BASIC8.18□□□□□ -1.1
Vps53Q8CCB4 Gm44833-201ENSMUST00000208368 331 ntBASIC8.18□□□□□ -1.1
Vps53Q8CCB4 Gm35021-202ENSMUST00000210289 961 ntTSL 5 BASIC8.18□□□□□ -1.1
Vps53Q8CCB4 Gm4247-201ENSMUST00000211441 1042 ntBASIC8.18□□□□□ -1.1
Vps53Q8CCB4 Gm45497-201ENSMUST00000211701 740 ntBASIC8.18□□□□□ -1.1
Vps53Q8CCB4 AC133948.2-201ENSMUST00000217850 378 ntBASIC8.18□□□□□ -1.1
Vps53Q8CCB4 AC156574.1-201ENSMUST00000227084 452 ntBASIC8.18□□□□□ -1.1
Vps53Q8CCB4 Olfr684-201ENSMUST00000060893 939 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
Vps53Q8CCB4 4933400A11Rik-202ENSMUST00000068894 1217 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Vps53Q8CCB4 Gm24924-201ENSMUST00000084007 164 ntBASIC8.18□□□□□ -1.1
Vps53Q8CCB4 Gm10693-201ENSMUST00000144146 2037 ntBASIC8.18□□□□□ -1.1
Vps53Q8CCB4 4921534H16Rik-201ENSMUST00000162370 1392 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Vps53Q8CCB4 9330199G10Rik-201ENSMUST00000221601 2072 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Vps53Q8CCB4 Gm13102-202ENSMUST00000097800 2293 ntAPPRIS ALT2 TSL 5 BASIC8.18□□□□□ -1.1
Vps53Q8CCB4 Itgae-201ENSMUST00000006101 3845 ntAPPRIS P4 TSL 1 (best) BASIC8.18□□□□□ -1.1
Vps53Q8CCB4 Gm42820-201ENSMUST00000200084 3063 ntBASIC8.18□□□□□ -1.1
Vps53Q8CCB4 Gm37142-201ENSMUST00000193718 3110 ntBASIC8.18□□□□□ -1.1
Vps53Q8CCB4 Olfr435-202ENSMUST00000215565 2491 ntAPPRIS P1 TSL 5 BASIC8.18□□□□□ -1.1
Vps53Q8CCB4 Phc1-208ENSMUST00000160696 4213 ntAPPRIS P3 TSL 1 (best) BASIC8.18□□□□□ -1.1
Vps53Q8CCB4 Gm11217-201ENSMUST00000141162 1729 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Vps53Q8CCB4 Nckap5-201ENSMUST00000057846 5334 ntAPPRIS ALT2 TSL 5 BASIC8.17□□□□□ -1.1
Vps53Q8CCB4 Macrod2os2-201ENSMUST00000143227 3566 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Vps53Q8CCB4 Olfr675-204ENSMUST00000215899 3737 ntTSL 5 BASIC8.17□□□□□ -1.1
Vps53Q8CCB4 CT010470.1-201ENSMUST00000225364 1876 ntBASIC8.17□□□□□ -1.1
Vps53Q8CCB4 Zfp239-201ENSMUST00000079405 3158 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Vps53Q8CCB4 Mdm4-ps-201ENSMUST00000121299 6514 ntBASIC8.17□□□□□ -1.1
Vps53Q8CCB4 AC164437.5-201ENSMUST00000227235 4414 ntBASIC8.17□□□□□ -1.1
Vps53Q8CCB4 Vmn1r58-204ENSMUST00000228728 9991 ntAPPRIS P1 BASIC8.17□□□□□ -1.1
Vps53Q8CCB4 Gm11338-201ENSMUST00000120086 1160 ntBASIC8.17□□□□□ -1.1
Vps53Q8CCB4 6430710C18Rik-202ENSMUST00000125746 509 ntTSL 5 BASIC8.17□□□□□ -1.1
Vps53Q8CCB4 Gm2735-201ENSMUST00000136133 277 ntBASIC8.17□□□□□ -1.1
Vps53Q8CCB4 Gm11626-201ENSMUST00000142107 333 ntTSL 3 BASIC8.17□□□□□ -1.1
Vps53Q8CCB4 Gm22882-201ENSMUST00000157749 124 ntBASIC8.17□□□□□ -1.1
Vps53Q8CCB4 Gm8305-201ENSMUST00000180022 1195 ntBASIC8.17□□□□□ -1.1
Vps53Q8CCB4 Mir6357-201ENSMUST00000184246 104 ntBASIC8.17□□□□□ -1.1
Vps53Q8CCB4 Gm28070-201ENSMUST00000191502 445 ntBASIC8.17□□□□□ -1.1
Vps53Q8CCB4 Fcer1g-203ENSMUST00000193973 683 ntTSL 3 BASIC8.17□□□□□ -1.1
Vps53Q8CCB4 Gm43192-201ENSMUST00000198002 637 ntTSL 3 BASIC8.17□□□□□ -1.1
Vps53Q8CCB4 Gm43725-201ENSMUST00000200122 369 ntBASIC8.17□□□□□ -1.1
Vps53Q8CCB4 Gm43124-201ENSMUST00000201878 278 ntBASIC8.17□□□□□ -1.1
Vps53Q8CCB4 Gpn1-206ENSMUST00000202394 631 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Vps53Q8CCB4 AC102582.2-201ENSMUST00000214658 1137 ntTSL 5 BASIC8.17□□□□□ -1.1
Vps53Q8CCB4 Tespa1-202ENSMUST00000217702 1102 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Vps53Q8CCB4 AC151901.1-201ENSMUST00000218274 180 ntBASIC8.17□□□□□ -1.1
Vps53Q8CCB4 Gm34552-201ENSMUST00000223381 636 ntTSL 5 BASIC8.17□□□□□ -1.1
Vps53Q8CCB4 AC154515.3-201ENSMUST00000225081 1159 ntBASIC8.17□□□□□ -1.1
Vps53Q8CCB4 Fxyd4-201ENSMUST00000005114 1199 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
Vps53Q8CCB4 Olfr610-201ENSMUST00000063109 948 ntAPPRIS P1 BASIC8.17□□□□□ -1.1
Vps53Q8CCB4 Olfr845-201ENSMUST00000071259 942 ntAPPRIS P1 BASIC8.17□□□□□ -1.1
Vps53Q8CCB4 Prom1-201ENSMUST00000030973 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC8.17□□□□□ -1.1
Vps53Q8CCB4 Gm37891-201ENSMUST00000195585 1326 ntBASIC8.17□□□□□ -1.1
Vps53Q8CCB4 Gm37161-201ENSMUST00000191994 2697 ntBASIC8.17□□□□□ -1.1
Vps53Q8CCB4 Gm45175-201ENSMUST00000208295 1375 ntTSL 5 BASIC8.17□□□□□ -1.1
Vps53Q8CCB4 Sec24c-202ENSMUST00000223751 4196 ntBASIC8.17□□□□□ -1.1
Vps53Q8CCB4 Gm7961-201ENSMUST00000201338 1436 ntBASIC8.17□□□□□ -1.1
Vps53Q8CCB4 Gm10568-201ENSMUST00000193244 1634 ntBASIC8.17□□□□□ -1.1
Vps53Q8CCB4 Rad21l-202ENSMUST00000180195 1659 ntAPPRIS P2 TSL 1 (best) BASIC8.17□□□□□ -1.1
Vps53Q8CCB4 Gm12021-201ENSMUST00000121061 1746 ntBASIC8.17□□□□□ -1.1
Vps53Q8CCB4 Gm20706-201ENSMUST00000175985 2023 ntBASIC8.17□□□□□ -1.1
Vps53Q8CCB4 D5Ertd577e-202ENSMUST00000202481 2469 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Vps53Q8CCB4 AC154597.1-201ENSMUST00000224095 2713 ntBASIC8.16□□□□□ -1.1
Vps53Q8CCB4 Gm15169-201ENSMUST00000126095 2753 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Vps53Q8CCB4 Olfr615-203ENSMUST00000215673 3469 ntAPPRIS P1 TSL 5 BASIC8.16□□□□□ -1.1
Vps53Q8CCB4 Speer5-ps1-203ENSMUST00000217649 7431 ntTSL 5 BASIC8.16□□□□□ -1.1
Vps53Q8CCB4 Smad5-202ENSMUST00000109874 4534 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Vps53Q8CCB4 Gm12653-201ENSMUST00000117778 561 ntBASIC8.16□□□□□ -1.1
Vps53Q8CCB4 Gm11858-201ENSMUST00000117935 838 ntBASIC8.16□□□□□ -1.1
Vps53Q8CCB4 Gm16420-201ENSMUST00000120258 856 ntBASIC8.16□□□□□ -1.1
Vps53Q8CCB4 9530046B11Rik-201ENSMUST00000149413 1157 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Vps53Q8CCB4 Gm16138-201ENSMUST00000159341 821 ntBASIC8.16□□□□□ -1.1
Vps53Q8CCB4 Gm16113-201ENSMUST00000159629 372 ntBASIC8.16□□□□□ -1.1
Vps53Q8CCB4 Vmn2r55-201ENSMUST00000167771 1407 ntTSL 5 BASIC8.16□□□□□ -1.1
Vps53Q8CCB4 Gm19840-201ENSMUST00000169624 882 ntBASIC8.16□□□□□ -1.1
Vps53Q8CCB4 Gm5726-201ENSMUST00000173886 924 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
Vps53Q8CCB4 Gm8677-201ENSMUST00000174637 924 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
Vps53Q8CCB4 Gm25617-201ENSMUST00000179548 133 ntBASIC8.16□□□□□ -1.1
Vps53Q8CCB4 Sbp-202ENSMUST00000181985 920 ntAPPRIS P1 TSL 3 BASIC8.16□□□□□ -1.1
Vps53Q8CCB4 Gm28416-201ENSMUST00000188334 292 ntBASIC8.16□□□□□ -1.1
Vps53Q8CCB4 Gm37349-201ENSMUST00000194205 624 ntBASIC8.16□□□□□ -1.1
Retrieved 100 of 76,532 protein–RNA pairs in 67.9 ms