Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 4931413K12Rik-201ENSMUST00000142068 1282 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Col6a6Q8C6K9 Gm5456-201ENSMUST00000170706 844 ntBASIC6.25□□□□□ -1.41
Col6a6Q8C6K9 Gm17045-201ENSMUST00000178600 844 ntBASIC6.25□□□□□ -1.41
Col6a6Q8C6K9 Gm26654-201ENSMUST00000180455 256 ntTSL 3 BASIC6.25□□□□□ -1.41
Col6a6Q8C6K9 Gm9167-201ENSMUST00000182469 962 ntBASIC6.25□□□□□ -1.41
Col6a6Q8C6K9 Scgb1b21-202ENSMUST00000182901 278 ntTSL 5 BASIC6.25□□□□□ -1.41
Col6a6Q8C6K9 Rian-215ENSMUST00000183180 633 ntTSL 5 BASIC6.25□□□□□ -1.41
Col6a6Q8C6K9 7530428D23Rik-201ENSMUST00000191725 765 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Col6a6Q8C6K9 Gm43838-201ENSMUST00000196357 348 ntTSL 3 BASIC6.25□□□□□ -1.41
Col6a6Q8C6K9 1700015C17Rik-201ENSMUST00000197297 239 ntTSL 5 BASIC6.25□□□□□ -1.41
Col6a6Q8C6K9 n-TStga1-201ENSMUST00000199903 109 ntBASIC6.25□□□□□ -1.41
Col6a6Q8C6K9 Gm7492-201ENSMUST00000201745 725 ntBASIC6.25□□□□□ -1.41
Col6a6Q8C6K9 Gm18995-201ENSMUST00000202981 520 ntBASIC6.25□□□□□ -1.41
Col6a6Q8C6K9 Gm43867-201ENSMUST00000203860 525 ntBASIC6.25□□□□□ -1.41
Col6a6Q8C6K9 Olrf445-ps1-201ENSMUST00000204960 314 ntBASIC6.25□□□□□ -1.41
Col6a6Q8C6K9 Gm4803-201ENSMUST00000218729 1279 ntBASIC6.25□□□□□ -1.41
Col6a6Q8C6K9 Gm6575-201ENSMUST00000222946 697 ntBASIC6.25□□□□□ -1.41
Col6a6Q8C6K9 AC126554.3-201ENSMUST00000223131 493 ntBASIC6.25□□□□□ -1.41
Col6a6Q8C6K9 AC113031.6-202ENSMUST00000228468 1145 ntBASIC6.25□□□□□ -1.41
Col6a6Q8C6K9 Tas2r143-201ENSMUST00000057398 882 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
Col6a6Q8C6K9 Defb42-201ENSMUST00000067990 618 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Col6a6Q8C6K9 Gm22865-201ENSMUST00000083949 214 ntBASIC6.25□□□□□ -1.41
Col6a6Q8C6K9 Olfr1012-201ENSMUST00000099916 936 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
Col6a6Q8C6K9 Gm26555-202ENSMUST00000180882 3726 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Col6a6Q8C6K9 Apbb1ip-201ENSMUST00000014290 2773 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Col6a6Q8C6K9 Vmn1r184-205ENSMUST00000227790 4334 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
Col6a6Q8C6K9 Magi2-215ENSMUST00000208219 3266 ntTSL 5 BASIC6.25□□□□□ -1.41
Col6a6Q8C6K9 Fbxw20-201ENSMUST00000079548 1511 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Col6a6Q8C6K9 Rbm6-ps1-201ENSMUST00000186192 2870 ntBASIC6.25□□□□□ -1.41
Col6a6Q8C6K9 Trappc13-201ENSMUST00000022224 2342 ntAPPRIS P4 TSL 1 (best) BASIC6.25□□□□□ -1.41
Col6a6Q8C6K9 Ces1c-201ENSMUST00000034189 1828 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Col6a6Q8C6K9 Tarm1-202ENSMUST00000203020 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
Col6a6Q8C6K9 Trbv12-2-201ENSMUST00000103269 385 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Col6a6Q8C6K9 Gm11462-201ENSMUST00000117749 562 ntBASIC6.24□□□□□ -1.41
Col6a6Q8C6K9 Gm16095-201ENSMUST00000128235 253 ntTSL 5 BASIC6.24□□□□□ -1.41
Col6a6Q8C6K9 AF067063-201ENSMUST00000179455 590 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Col6a6Q8C6K9 Gm27210-201ENSMUST00000184263 402 ntBASIC6.24□□□□□ -1.41
Col6a6Q8C6K9 Gm18447-201ENSMUST00000187501 307 ntBASIC6.24□□□□□ -1.41
Col6a6Q8C6K9 Gm8883-201ENSMUST00000187594 454 ntTSL 3 BASIC6.24□□□□□ -1.41
Col6a6Q8C6K9 Gm38022-201ENSMUST00000191762 403 ntBASIC6.24□□□□□ -1.41
Col6a6Q8C6K9 Ass-ps1-201ENSMUST00000197717 761 ntBASIC6.24□□□□□ -1.41
Col6a6Q8C6K9 Gm44911-201ENSMUST00000208436 1062 ntBASIC6.24□□□□□ -1.41
Col6a6Q8C6K9 AC154219.1-201ENSMUST00000220764 1262 ntBASIC6.24□□□□□ -1.41
Col6a6Q8C6K9 AC127242.4-201ENSMUST00000221242 470 ntBASIC6.24□□□□□ -1.41
Col6a6Q8C6K9 AC154324.1-201ENSMUST00000226711 814 ntBASIC6.24□□□□□ -1.41
Col6a6Q8C6K9 AC138765.3-201ENSMUST00000227981 423 ntBASIC6.24□□□□□ -1.41
Col6a6Q8C6K9 Snora21-201ENSMUST00000082967 137 ntBASIC6.24□□□□□ -1.41
Col6a6Q8C6K9 Zfp874a-201ENSMUST00000057241 2210 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Col6a6Q8C6K9 Gm44121-201ENSMUST00000205169 2006 ntBASIC6.24□□□□□ -1.41
Col6a6Q8C6K9 Mageb18-202ENSMUST00000113955 2163 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Col6a6Q8C6K9 Nlrp3-202ENSMUST00000101148 4021 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Col6a6Q8C6K9 Gm20560-201ENSMUST00000204577 3513 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Col6a6Q8C6K9 Wars2-201ENSMUST00000004343 4410 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Col6a6Q8C6K9 AC124516.2-201ENSMUST00000221455 1829 ntBASIC6.24□□□□□ -1.41
Col6a6Q8C6K9 Gm44130-201ENSMUST00000205157 3004 ntBASIC6.24□□□□□ -1.41
Col6a6Q8C6K9 Gm6249-201ENSMUST00000211142 3314 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Col6a6Q8C6K9 CT571245.1-201ENSMUST00000218642 3465 ntBASIC6.24□□□□□ -1.41
Col6a6Q8C6K9 Slc6a18-203ENSMUST00000109680 4052 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Col6a6Q8C6K9 Gm43311-201ENSMUST00000200016 2377 ntBASIC6.24□□□□□ -1.41
Col6a6Q8C6K9 Gm44101-201ENSMUST00000203951 2221 ntBASIC6.24□□□□□ -1.41
Col6a6Q8C6K9 Vmn1r50-203ENSMUST00000226577 2240 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Col6a6Q8C6K9 Slco6b1-202ENSMUST00000178359 1778 ntBASIC6.24□□□□□ -1.41
Col6a6Q8C6K9 C2cd3-202ENSMUST00000098259 6602 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
Col6a6Q8C6K9 Gm14418-201ENSMUST00000108955 1415 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Col6a6Q8C6K9 Olfr1364-203ENSMUST00000213912 3119 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Col6a6Q8C6K9 Trav19-201ENSMUST00000103674 446 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Col6a6Q8C6K9 Gm24434-201ENSMUST00000104081 132 ntBASIC6.24□□□□□ -1.41
Col6a6Q8C6K9 Gm15967-201ENSMUST00000120027 1116 ntBASIC6.24□□□□□ -1.41
Col6a6Q8C6K9 Olfr349-ps1-201ENSMUST00000121879 609 ntBASIC6.24□□□□□ -1.41
Col6a6Q8C6K9 Zfp783-203ENSMUST00000130463 537 ntTSL 2 BASIC6.24□□□□□ -1.41
Col6a6Q8C6K9 Gm8837-201ENSMUST00000161037 1107 ntBASIC6.24□□□□□ -1.41
Col6a6Q8C6K9 Gm25246-201ENSMUST00000175476 69 ntBASIC6.24□□□□□ -1.41
Col6a6Q8C6K9 Olr1-203ENSMUST00000182784 570 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
Col6a6Q8C6K9 Gm27849-201ENSMUST00000183673 125 ntBASIC6.24□□□□□ -1.41
Col6a6Q8C6K9 2610027F03Rik-201ENSMUST00000185443 530 ntTSL 5 BASIC6.24□□□□□ -1.41
Col6a6Q8C6K9 1700025B11Rik-201ENSMUST00000190233 553 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Col6a6Q8C6K9 Rps4x-ps-201ENSMUST00000199852 793 ntBASIC6.24□□□□□ -1.41
Col6a6Q8C6K9 Gm43233-201ENSMUST00000200491 616 ntBASIC6.24□□□□□ -1.41
Col6a6Q8C6K9 Olfr396-ps1-202ENSMUST00000205791 633 ntBASIC6.24□□□□□ -1.41
Col6a6Q8C6K9 Gm45064-201ENSMUST00000208619 443 ntTSL 5 BASIC6.24□□□□□ -1.41
Col6a6Q8C6K9 CT025685.1-201ENSMUST00000213716 150 ntBASIC6.24□□□□□ -1.41
Col6a6Q8C6K9 AC163651.1-201ENSMUST00000222500 372 ntBASIC6.24□□□□□ -1.41
Col6a6Q8C6K9 Sprr2k-201ENSMUST00000067102 637 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Col6a6Q8C6K9 AW822073-201ENSMUST00000075305 555 ntBASIC6.24□□□□□ -1.41
Col6a6Q8C6K9 Olfr519-201ENSMUST00000084752 960 ntBASIC6.24□□□□□ -1.41
Col6a6Q8C6K9 Olfr1199-204ENSMUST00000213138 2657 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Col6a6Q8C6K9 Efr3a-213ENSMUST00000211878 2541 ntTSL 5 BASIC6.24□□□□□ -1.41
Col6a6Q8C6K9 Brca1-201ENSMUST00000017290 6572 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Col6a6Q8C6K9 Wdr37-202ENSMUST00000054251 4626 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Col6a6Q8C6K9 Polk-204ENSMUST00000221645 1644 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
Col6a6Q8C6K9 Olfr859-203ENSMUST00000217280 9596 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Col6a6Q8C6K9 Gm37785-201ENSMUST00000195783 2408 ntBASIC6.24□□□□□ -1.41
Col6a6Q8C6K9 Zmat4-201ENSMUST00000042352 4182 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Col6a6Q8C6K9 Nfia-201ENSMUST00000052018 9249 ntTSL 5 BASIC6.23□□□□□ -1.41
Col6a6Q8C6K9 Gm10439-201ENSMUST00000101181 1977 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Col6a6Q8C6K9 Obox3-206ENSMUST00000174443 1979 ntAPPRIS P1 TSL 2 BASIC6.23□□□□□ -1.41
Col6a6Q8C6K9 Mat2a-206ENSMUST00000206692 1400 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Col6a6Q8C6K9 Esrrg-201ENSMUST00000027906 5293 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
Col6a6Q8C6K9 Gm37948-201ENSMUST00000192846 2169 ntTSL 5 BASIC6.23□□□□□ -1.41
Col6a6Q8C6K9 Gm973-201ENSMUST00000114243 3595 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 76.9 ms