Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Gm6536-201ENSMUST00000171180 615 ntBASIC7.31□□□□□ -1.24
Trim43aQ3TL54 Gm4956-202ENSMUST00000178869 672 ntBASIC7.31□□□□□ -1.24
Trim43aQ3TL54 Gm28119-201ENSMUST00000185538 298 ntTSL 5 BASIC7.31□□□□□ -1.24
Trim43aQ3TL54 Gm8883-202ENSMUST00000188258 545 ntTSL 3 BASIC7.31□□□□□ -1.24
Trim43aQ3TL54 Gm37425-201ENSMUST00000193184 432 ntTSL 5 BASIC7.31□□□□□ -1.24
Trim43aQ3TL54 Gm44577-201ENSMUST00000207413 1284 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Trim43aQ3TL54 Gm44692-201ENSMUST00000207441 901 ntTSL 3 BASIC7.31□□□□□ -1.24
Trim43aQ3TL54 Aadat-202ENSMUST00000209338 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC7.31□□□□□ -1.24
Trim43aQ3TL54 Gm45732-201ENSMUST00000212460 586 ntTSL 5 BASIC7.31□□□□□ -1.24
Trim43aQ3TL54 4930434F21Rik-201ENSMUST00000214381 742 ntTSL 5 BASIC7.31□□□□□ -1.24
Trim43aQ3TL54 AC133948.2-201ENSMUST00000217850 378 ntBASIC7.31□□□□□ -1.24
Trim43aQ3TL54 AC079680.1-202ENSMUST00000219835 654 ntTSL 5 BASIC7.31□□□□□ -1.24
Trim43aQ3TL54 AC156576.3-201ENSMUST00000221940 452 ntTSL 5 BASIC7.31□□□□□ -1.24
Trim43aQ3TL54 AC154849.2-201ENSMUST00000223781 974 ntBASIC7.31□□□□□ -1.24
Trim43aQ3TL54 AC118006.3-201ENSMUST00000223948 1176 ntBASIC7.31□□□□□ -1.24
Trim43aQ3TL54 Ly6g-201ENSMUST00000023246 336 ntTSL 5 BASIC7.31□□□□□ -1.24
Trim43aQ3TL54 Wdr7-201ENSMUST00000072726 7109 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Trim43aQ3TL54 Sry-201ENSMUST00000091178 1188 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
Trim43aQ3TL54 Gk-206ENSMUST00000142152 4229 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Trim43aQ3TL54 Soat1-207ENSMUST00000189661 8371 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Trim43aQ3TL54 Cfap54-211ENSMUST00000212902 9516 ntAPPRIS P5 TSL 1 (best) BASIC7.31□□□□□ -1.24
Trim43aQ3TL54 Olfr1106-202ENSMUST00000213781 2569 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
Trim43aQ3TL54 Olfr1106-203ENSMUST00000217650 2573 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
Trim43aQ3TL54 Amot-202ENSMUST00000112836 6957 ntAPPRIS P2 TSL 5 BASIC7.31□□□□□ -1.24
Trim43aQ3TL54 Depdc1a-202ENSMUST00000106041 1971 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Trim43aQ3TL54 Ap2b1-202ENSMUST00000065692 3269 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Trim43aQ3TL54 Ccdc83-203ENSMUST00000107221 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC7.31□□□□□ -1.24
Trim43aQ3TL54 Gm10619-201ENSMUST00000098372 2695 ntTSL 5 BASIC7.31□□□□□ -1.24
Trim43aQ3TL54 Gm43557-201ENSMUST00000197100 2370 ntBASIC7.31□□□□□ -1.24
Trim43aQ3TL54 Krt222-202ENSMUST00000103132 3072 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Trim43aQ3TL54 Atp13a4-202ENSMUST00000057018 4054 ntAPPRIS ALT2 TSL 1 (best) BASIC7.31□□□□□ -1.24
Trim43aQ3TL54 Fam47c-201ENSMUST00000105110 1639 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
Trim43aQ3TL54 Slc6a20a-203ENSMUST00000171647 3894 ntTSL 5 BASIC7.3□□□□□ -1.24
Trim43aQ3TL54 Tarm1-202ENSMUST00000203020 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC7.3□□□□□ -1.24
Trim43aQ3TL54 Amer1-201ENSMUST00000084535 8496 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Trim43aQ3TL54 AC117608.1-201ENSMUST00000225500 3418 ntBASIC7.3□□□□□ -1.24
Trim43aQ3TL54 Bmi1-202ENSMUST00000051929 2747 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Trim43aQ3TL54 Scn1a-202ENSMUST00000094951 5946 ntTSL 5 BASIC7.3□□□□□ -1.24
Trim43aQ3TL54 Ndnf-201ENSMUST00000054351 10101 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Trim43aQ3TL54 Mir697-201ENSMUST00000102316 109 ntBASIC7.3□□□□□ -1.24
Trim43aQ3TL54 Gm25546-201ENSMUST00000103977 132 ntBASIC7.3□□□□□ -1.24
Trim43aQ3TL54 Vgll1-202ENSMUST00000114745 1218 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Trim43aQ3TL54 Gm11926-201ENSMUST00000118520 430 ntBASIC7.3□□□□□ -1.24
Trim43aQ3TL54 Gm11987-201ENSMUST00000118524 381 ntBASIC7.3□□□□□ -1.24
Trim43aQ3TL54 Gm14727-201ENSMUST00000118526 525 ntBASIC7.3□□□□□ -1.24
Trim43aQ3TL54 Gm13463-201ENSMUST00000119020 233 ntBASIC7.3□□□□□ -1.24
Trim43aQ3TL54 Gm12459-201ENSMUST00000120659 356 ntBASIC7.3□□□□□ -1.24
Trim43aQ3TL54 Gm14721-201ENSMUST00000121381 525 ntBASIC7.3□□□□□ -1.24
Trim43aQ3TL54 Gm24228-201ENSMUST00000158829 129 ntBASIC7.3□□□□□ -1.24
Trim43aQ3TL54 Fam47e-207ENSMUST00000176621 746 ntTSL 3 BASIC7.3□□□□□ -1.24
Trim43aQ3TL54 Gm4373-201ENSMUST00000178571 556 ntBASIC7.3□□□□□ -1.24
Trim43aQ3TL54 Mir6357-201ENSMUST00000184246 104 ntBASIC7.3□□□□□ -1.24
Trim43aQ3TL54 Gm29354-201ENSMUST00000187613 696 ntBASIC7.3□□□□□ -1.24
Trim43aQ3TL54 Gm3428-204ENSMUST00000214488 1020 ntTSL 5 BASIC7.3□□□□□ -1.24
Trim43aQ3TL54 4930466K18Rik-201ENSMUST00000219458 906 ntBASIC7.3□□□□□ -1.24
Trim43aQ3TL54 4930563J15Rik-202ENSMUST00000219752 560 ntTSL 3 BASIC7.3□□□□□ -1.24
Trim43aQ3TL54 Gm4796-201ENSMUST00000219802 624 ntBASIC7.3□□□□□ -1.24
Trim43aQ3TL54 AC163354.2-201ENSMUST00000221741 649 ntTSL 3 BASIC7.3□□□□□ -1.24
Trim43aQ3TL54 AC139568.1-201ENSMUST00000222878 486 ntBASIC7.3□□□□□ -1.24
Trim43aQ3TL54 AC165154.2-201ENSMUST00000227310 336 ntBASIC7.3□□□□□ -1.24
Trim43aQ3TL54 AC154806.5-204ENSMUST00000228900 867 ntBASIC7.3□□□□□ -1.24
Trim43aQ3TL54 Npvf-201ENSMUST00000031853 812 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Trim43aQ3TL54 Il22-201ENSMUST00000096691 1110 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Trim43aQ3TL54 Gm43953-201ENSMUST00000203709 2867 ntBASIC7.3□□□□□ -1.24
Trim43aQ3TL54 Rps15a-207ENSMUST00000172457 5130 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Trim43aQ3TL54 Olfr1396-201ENSMUST00000060398 3946 ntAPPRIS P1 TSL 5 BASIC7.3□□□□□ -1.24
Trim43aQ3TL54 Syn3-202ENSMUST00000121789 4006 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Trim43aQ3TL54 Psg18-202ENSMUST00000098783 1783 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Trim43aQ3TL54 Lpin1-204ENSMUST00000221230 4114 ntAPPRIS ALT2 TSL 1 (best) BASIC7.3□□□□□ -1.24
Trim43aQ3TL54 Dip2b-203ENSMUST00000108971 8127 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Trim43aQ3TL54 Spata31d1d-201ENSMUST00000052978 3827 ntAPPRIS P1 TSL 2 BASIC7.3□□□□□ -1.24
Trim43aQ3TL54 Gm45001-201ENSMUST00000208279 2515 ntBASIC7.3□□□□□ -1.24
Trim43aQ3TL54 Olfr1410-203ENSMUST00000217316 7927 ntAPPRIS P1 TSL 5 BASIC7.3□□□□□ -1.24
Trim43aQ3TL54 Gm44956-201ENSMUST00000208277 2887 ntTSL 5 BASIC7.3□□□□□ -1.24
Trim43aQ3TL54 Gm44584-201ENSMUST00000208395 2880 ntBASIC7.3□□□□□ -1.24
Trim43aQ3TL54 Gm38276-201ENSMUST00000192446 1343 ntBASIC7.29□□□□□ -1.24
Trim43aQ3TL54 AC125487.2-201ENSMUST00000219810 1300 ntBASIC7.29□□□□□ -1.24
Trim43aQ3TL54 Gm14245-201ENSMUST00000118939 1843 ntBASIC7.29□□□□□ -1.24
Trim43aQ3TL54 Gm44093-201ENSMUST00000204381 1802 ntBASIC7.29□□□□□ -1.24
Trim43aQ3TL54 Vmn1r50-202ENSMUST00000089417 2059 ntAPPRIS P1 TSL 2 BASIC7.29□□□□□ -1.24
Trim43aQ3TL54 4930449A18Rik-201ENSMUST00000094228 2071 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Trim43aQ3TL54 Sspo-201ENSMUST00000043676 15148 ntAPPRIS ALT2 TSL 5 BASIC7.29□□□□□ -1.24
Trim43aQ3TL54 Ezh1-203ENSMUST00000107285 4193 ntAPPRIS P2 TSL 1 (best) BASIC7.29□□□□□ -1.24
Trim43aQ3TL54 Gm15731-201ENSMUST00000146887 2195 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Trim43aQ3TL54 Gm39139-202ENSMUST00000212621 5878 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Trim43aQ3TL54 Pcbp2-203ENSMUST00000108838 2775 ntAPPRIS ALT1 TSL 2 BASIC7.29□□□□□ -1.24
Trim43aQ3TL54 Zfand4-201ENSMUST00000036503 3123 ntAPPRIS P5 TSL 5 BASIC7.29□□□□□ -1.24
Trim43aQ3TL54 Gm25614-201ENSMUST00000104013 133 ntBASIC7.29□□□□□ -1.24
Trim43aQ3TL54 Gm23527-201ENSMUST00000104570 130 ntBASIC7.29□□□□□ -1.24
Trim43aQ3TL54 Stmn1-203ENSMUST00000105868 967 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Trim43aQ3TL54 Cdc42se1-202ENSMUST00000107199 652 ntTSL 5 BASIC7.29□□□□□ -1.24
Trim43aQ3TL54 Cisd3-201ENSMUST00000107583 737 ntAPPRIS P2 TSL 1 (best) BASIC7.29□□□□□ -1.24
Trim43aQ3TL54 Slc35a5-202ENSMUST00000114600 679 ntTSL 3 BASIC7.29□□□□□ -1.24
Trim43aQ3TL54 Gm15712-201ENSMUST00000120369 1156 ntBASIC7.29□□□□□ -1.24
Trim43aQ3TL54 Gm12518-201ENSMUST00000122075 779 ntBASIC7.29□□□□□ -1.24
Trim43aQ3TL54 Gm14457-201ENSMUST00000148069 1161 ntBASIC7.29□□□□□ -1.24
Trim43aQ3TL54 Gm15787-207ENSMUST00000152014 885 ntTSL 2 BASIC7.29□□□□□ -1.24
Trim43aQ3TL54 Gm22915-201ENSMUST00000157615 136 ntBASIC7.29□□□□□ -1.24
Trim43aQ3TL54 Gm20738-201ENSMUST00000177666 1225 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Trim43aQ3TL54 Gm20823-201ENSMUST00000179949 1231 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Retrieved 100 of 76,532 protein–RNA pairs in 62.9 ms