Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Gm26784-201ENSMUST00000181666 410 ntBASIC5.97□□□□□ -1.45
Trim63Q38HM4 Zfp572-202ENSMUST00000184208 1078 ntBASIC5.97□□□□□ -1.45
Trim63Q38HM4 Gm28809-201ENSMUST00000187542 782 ntTSL 5 BASIC5.97□□□□□ -1.45
Trim63Q38HM4 Gm8883-202ENSMUST00000188258 545 ntTSL 3 BASIC5.97□□□□□ -1.45
Trim63Q38HM4 Mir124-2hg-205ENSMUST00000189467 173 ntTSL 5 BASIC5.97□□□□□ -1.45
Trim63Q38HM4 Gm37857-201ENSMUST00000191784 1199 ntBASIC5.97□□□□□ -1.45
Trim63Q38HM4 Gm36961-201ENSMUST00000191980 132 ntBASIC5.97□□□□□ -1.45
Trim63Q38HM4 9530003O04Rik-201ENSMUST00000192663 908 ntBASIC5.97□□□□□ -1.45
Trim63Q38HM4 Gm6074-201ENSMUST00000193340 451 ntBASIC5.97□□□□□ -1.45
Trim63Q38HM4 Gm9729-201ENSMUST00000196364 265 ntBASIC5.97□□□□□ -1.45
Trim63Q38HM4 D030025E07Rik-204ENSMUST00000198275 653 ntTSL 3 BASIC5.97□□□□□ -1.45
Trim63Q38HM4 Gm42593-201ENSMUST00000198469 377 ntBASIC5.97□□□□□ -1.45
Trim63Q38HM4 Iglc3-201ENSMUST00000200235 452 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
Trim63Q38HM4 Nsg1-205ENSMUST00000201415 883 ntTSL 5 BASIC5.97□□□□□ -1.45
Trim63Q38HM4 Gm2762-203ENSMUST00000201658 1234 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Trim63Q38HM4 Gm31532-201ENSMUST00000203555 767 ntBASIC5.97□□□□□ -1.45
Trim63Q38HM4 Gm44277-201ENSMUST00000205128 649 ntBASIC5.97□□□□□ -1.45
Trim63Q38HM4 Gm45216-201ENSMUST00000205547 600 ntTSL 3 BASIC5.97□□□□□ -1.45
Trim63Q38HM4 Gm45225-201ENSMUST00000206852 1139 ntBASIC5.97□□□□□ -1.45
Trim63Q38HM4 Gm32507-201ENSMUST00000209552 437 ntTSL 5 BASIC5.97□□□□□ -1.45
Trim63Q38HM4 4933407I05Rik-202ENSMUST00000213467 420 ntTSL 2 BASIC5.97□□□□□ -1.45
Trim63Q38HM4 AC151971.6-201ENSMUST00000216193 866 ntBASIC5.97□□□□□ -1.45
Trim63Q38HM4 CAAA01052029.1-201ENSMUST00000218410 271 ntBASIC5.97□□□□□ -1.45
Trim63Q38HM4 Gm7239-201ENSMUST00000220981 860 ntBASIC5.97□□□□□ -1.45
Trim63Q38HM4 AC139941.1-201ENSMUST00000221517 478 ntBASIC5.97□□□□□ -1.45
Trim63Q38HM4 Timm9-210ENSMUST00000221892 734 ntTSL 5 BASIC5.97□□□□□ -1.45
Trim63Q38HM4 Gm21056-202ENSMUST00000223122 423 ntBASIC5.97□□□□□ -1.45
Trim63Q38HM4 CT009728.1-201ENSMUST00000225228 1050 ntBASIC5.97□□□□□ -1.45
Trim63Q38HM4 AC116390.1-201ENSMUST00000227975 670 ntBASIC5.97□□□□□ -1.45
Trim63Q38HM4 Tff3-201ENSMUST00000024827 493 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Trim63Q38HM4 Apoc3-201ENSMUST00000034586 526 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Trim63Q38HM4 Gm15421-201ENSMUST00000051985 443 ntTSL 3 BASIC5.97□□□□□ -1.45
Trim63Q38HM4 Olfr683-201ENSMUST00000061284 960 ntBASIC5.97□□□□□ -1.45
Trim63Q38HM4 Olfr888-201ENSMUST00000075228 945 ntBASIC5.97□□□□□ -1.45
Trim63Q38HM4 Gm22053-201ENSMUST00000083394 200 ntBASIC5.97□□□□□ -1.45
Trim63Q38HM4 Gm10155-201ENSMUST00000084598 483 ntBASIC5.97□□□□□ -1.45
Trim63Q38HM4 Klk1b21-201ENSMUST00000085455 871 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Trim63Q38HM4 Zfp850-201ENSMUST00000099111 941 ntBASIC5.97□□□□□ -1.45
Trim63Q38HM4 Pcdh15-214ENSMUST00000129404 6857 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
Trim63Q38HM4 Cntn4-202ENSMUST00000089208 5179 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
Trim63Q38HM4 Gm42756-201ENSMUST00000196601 2614 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Trim63Q38HM4 Ctage5-202ENSMUST00000069430 2869 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Trim63Q38HM4 Ppargc1a-203ENSMUST00000132734 6464 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Trim63Q38HM4 Olfr537-ps1-201ENSMUST00000209871 2792 ntAPPRIS P1 TSL 3 BASIC5.97□□□□□ -1.45
Trim63Q38HM4 Olfr542-ps1-202ENSMUST00000218525 4039 ntTSL 5 BASIC5.97□□□□□ -1.45
Trim63Q38HM4 AC163660.4-201ENSMUST00000224983 2171 ntBASIC5.97□□□□□ -1.45
Trim63Q38HM4 Ikzf3-201ENSMUST00000103141 3658 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
Trim63Q38HM4 Mgam-206ENSMUST00000202779 3821 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Trim63Q38HM4 Gm37762-201ENSMUST00000194515 3561 ntBASIC5.97□□□□□ -1.45
Trim63Q38HM4 Vmn1r203-202ENSMUST00000227520 8227 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
Trim63Q38HM4 Olfr212-203ENSMUST00000220134 2349 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
Trim63Q38HM4 Etv1-202ENSMUST00000159334 3981 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Trim63Q38HM4 5033425B01Rik-201ENSMUST00000213948 1303 ntBASIC5.97□□□□□ -1.45
Trim63Q38HM4 4930544L04Rik-202ENSMUST00000211181 3204 ntBASIC5.97□□□□□ -1.45
Trim63Q38HM4 Ttc12-201ENSMUST00000055096 3628 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Trim63Q38HM4 Il7r-201ENSMUST00000003981 3540 ntAPPRIS P2 TSL 1 (best) BASIC5.96□□□□□ -1.45
Trim63Q38HM4 CT009480.3-201ENSMUST00000224051 3032 ntBASIC5.96□□□□□ -1.45
Trim63Q38HM4 Gm42513-201ENSMUST00000197831 2119 ntBASIC5.96□□□□□ -1.45
Trim63Q38HM4 Ppp2r3a-201ENSMUST00000066773 4461 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
Trim63Q38HM4 Olfr57-202ENSMUST00000203906 1647 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.45
Trim63Q38HM4 4932416K20Rik-201ENSMUST00000093229 3554 ntBASIC5.96□□□□□ -1.45
Trim63Q38HM4 AC163354.1-204ENSMUST00000222226 2033 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
Trim63Q38HM4 Usp47-202ENSMUST00000210309 5816 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.45
Trim63Q38HM4 Gm20749-201ENSMUST00000186319 3492 ntBASIC5.96□□□□□ -1.45
Trim63Q38HM4 Gm9226-201ENSMUST00000188352 3489 ntBASIC5.96□□□□□ -1.45
Trim63Q38HM4 Zfp871-201ENSMUST00000057501 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
Trim63Q38HM4 Spx-204ENSMUST00000211094 1510 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.46
Trim63Q38HM4 Adgrf5-206ENSMUST00000226087 4954 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
Trim63Q38HM4 Siae-202ENSMUST00000213126 2306 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.46
Trim63Q38HM4 CT573019.1-201ENSMUST00000227762 1689 ntBASIC5.96□□□□□ -1.46
Trim63Q38HM4 Gm13192-201ENSMUST00000101199 208 ntBASIC5.96□□□□□ -1.46
Trim63Q38HM4 Gm23132-201ENSMUST00000104254 132 ntBASIC5.96□□□□□ -1.46
Trim63Q38HM4 S100a16-204ENSMUST00000107333 608 ntAPPRIS P1 TSL 3 BASIC5.96□□□□□ -1.46
Trim63Q38HM4 Ica1-202ENSMUST00000115518 1256 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Trim63Q38HM4 Gm15033-201ENSMUST00000118188 673 ntBASIC5.96□□□□□ -1.46
Trim63Q38HM4 Gm11781-201ENSMUST00000118328 472 ntBASIC5.96□□□□□ -1.46
Trim63Q38HM4 Gm10443-201ENSMUST00000119024 210 ntBASIC5.96□□□□□ -1.46
Trim63Q38HM4 Gm9085-201ENSMUST00000119994 1072 ntBASIC5.96□□□□□ -1.46
Trim63Q38HM4 Fthl17-ps1-201ENSMUST00000120058 516 ntBASIC5.96□□□□□ -1.46
Trim63Q38HM4 Gm14725-201ENSMUST00000120324 828 ntBASIC5.96□□□□□ -1.46
Trim63Q38HM4 Gm11350-201ENSMUST00000121436 870 ntBASIC5.96□□□□□ -1.46
Trim63Q38HM4 Snhg7os-201ENSMUST00000126798 546 ntTSL 5 BASIC5.96□□□□□ -1.46
Trim63Q38HM4 Gm15991-201ENSMUST00000127631 942 ntTSL 5 BASIC5.96□□□□□ -1.46
Trim63Q38HM4 Gm14170-201ENSMUST00000133751 331 ntTSL 3 BASIC5.96□□□□□ -1.46
Trim63Q38HM4 Gm13267-202ENSMUST00000150099 281 ntTSL 2 BASIC5.96□□□□□ -1.46
Trim63Q38HM4 Gm24735-201ENSMUST00000158859 118 ntBASIC5.96□□□□□ -1.46
Trim63Q38HM4 Clec2i-205ENSMUST00000162666 1091 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
Trim63Q38HM4 Vmn1r123-201ENSMUST00000166948 924 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
Trim63Q38HM4 Ulbp1-201ENSMUST00000169796 1093 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
Trim63Q38HM4 Vmn1r160-201ENSMUST00000171745 924 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
Trim63Q38HM4 Gm5335-201ENSMUST00000182995 1000 ntBASIC5.96□□□□□ -1.46
Trim63Q38HM4 Gm27941-201ENSMUST00000183418 142 ntBASIC5.96□□□□□ -1.46
Trim63Q38HM4 Gsdmcl2-202ENSMUST00000185391 796 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Trim63Q38HM4 Gm29525-201ENSMUST00000189844 699 ntBASIC5.96□□□□□ -1.46
Trim63Q38HM4 Gm10925-201ENSMUST00000189941 678 ntBASIC5.96□□□□□ -1.46
Trim63Q38HM4 1700019D03Rik-205ENSMUST00000190726 702 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
Trim63Q38HM4 Gm29523-201ENSMUST00000191415 699 ntBASIC5.96□□□□□ -1.46
Trim63Q38HM4 Ndufc1-204ENSMUST00000193279 315 ntAPPRIS P1 TSL 3 BASIC5.96□□□□□ -1.46
Trim63Q38HM4 Gm37349-201ENSMUST00000194205 624 ntBASIC5.96□□□□□ -1.46
Trim63Q38HM4 Ighv1-70-201ENSMUST00000196509 351 ntBASIC5.96□□□□□ -1.46
Retrieved 100 of 76,532 protein–RNA pairs in 79.5 ms