Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Gm37548-201ENSMUST00000194519 3814 ntBASIC4.55□□□□□ -1.68
PrkdcP97313 Topaz1-201ENSMUST00000178679 5030 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
PrkdcP97313 Rbm6-ps1-201ENSMUST00000186192 2870 ntBASIC4.55□□□□□ -1.68
PrkdcP97313 AC162181.1-201ENSMUST00000221643 3728 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
PrkdcP97313 Sycp1-201ENSMUST00000029448 3437 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
PrkdcP97313 Gm15011-201ENSMUST00000117724 1480 ntBASIC4.54□□□□□ -1.68
PrkdcP97313 AC120153.1-201ENSMUST00000226502 1311 ntBASIC4.54□□□□□ -1.68
PrkdcP97313 Frk-201ENSMUST00000019913 4696 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
PrkdcP97313 Gm4951-201ENSMUST00000031549 2645 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
PrkdcP97313 Gm43970-201ENSMUST00000204346 3605 ntBASIC4.54□□□□□ -1.68
PrkdcP97313 Serpinb6b-202ENSMUST00000110293 2193 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
PrkdcP97313 Gm8728-201ENSMUST00000207367 2178 ntBASIC4.54□□□□□ -1.68
PrkdcP97313 Gm8486-201ENSMUST00000207508 2171 ntBASIC4.54□□□□□ -1.68
PrkdcP97313 Gm8685-201ENSMUST00000207567 2183 ntBASIC4.54□□□□□ -1.68
PrkdcP97313 Gm16443-201ENSMUST00000207909 2184 ntBASIC4.54□□□□□ -1.68
PrkdcP97313 Slc17a3-204ENSMUST00000166467 4336 ntAPPRIS P3 TSL 5 BASIC4.54□□□□□ -1.68
PrkdcP97313 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
PrkdcP97313 Mup3-202ENSMUST00000107472 916 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
PrkdcP97313 Gm15709-201ENSMUST00000118354 213 ntBASIC4.54□□□□□ -1.68
PrkdcP97313 Gm13245-201ENSMUST00000119646 260 ntBASIC4.54□□□□□ -1.68
PrkdcP97313 Trav3n-2-201ENSMUST00000197693 334 ntBASIC4.54□□□□□ -1.68
PrkdcP97313 Gm43055-201ENSMUST00000198859 879 ntTSL 3 BASIC4.54□□□□□ -1.68
PrkdcP97313 Trav3d-2-201ENSMUST00000199874 334 ntBASIC4.54□□□□□ -1.68
PrkdcP97313 Gm46192-201ENSMUST00000217894 326 ntBASIC4.54□□□□□ -1.68
PrkdcP97313 AC124709.3-201ENSMUST00000227294 171 ntBASIC4.54□□□□□ -1.68
PrkdcP97313 Ppp4r4-202ENSMUST00000187155 2675 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
PrkdcP97313 Gm9752-201ENSMUST00000048965 2659 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
PrkdcP97313 Zfp275-202ENSMUST00000114499 6284 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
PrkdcP97313 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
PrkdcP97313 Vmn2r98-201ENSMUST00000170424 2574 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
PrkdcP97313 Nup93-202ENSMUST00000109547 2847 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
PrkdcP97313 Zfp780b-203ENSMUST00000205874 1907 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
PrkdcP97313 Gm22426-201ENSMUST00000103811 96 ntBASIC4.54□□□□□ -1.68
PrkdcP97313 Olfr407-ps1-201ENSMUST00000117794 866 ntBASIC4.54□□□□□ -1.68
PrkdcP97313 Gm24236-201ENSMUST00000157794 134 ntBASIC4.54□□□□□ -1.68
PrkdcP97313 Gm21392-201ENSMUST00000182950 972 ntBASIC4.54□□□□□ -1.68
PrkdcP97313 Zfp572-202ENSMUST00000184208 1078 ntBASIC4.54□□□□□ -1.68
PrkdcP97313 Gm28377-201ENSMUST00000189695 720 ntBASIC4.54□□□□□ -1.68
PrkdcP97313 Gm4587-201ENSMUST00000209135 637 ntBASIC4.54□□□□□ -1.68
PrkdcP97313 CT030124.1-201ENSMUST00000217130 235 ntBASIC4.54□□□□□ -1.68
PrkdcP97313 AC131745.2-201ENSMUST00000225736 565 ntBASIC4.54□□□□□ -1.68
PrkdcP97313 Gm20302-201ENSMUST00000080671 275 ntBASIC4.54□□□□□ -1.68
PrkdcP97313 Rpl29-ps2-201ENSMUST00000086508 478 ntBASIC4.54□□□□□ -1.68
PrkdcP97313 Olfr994-201ENSMUST00000099925 945 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
PrkdcP97313 Zbed4-ps3-201ENSMUST00000187149 3244 ntBASIC4.54□□□□□ -1.68
PrkdcP97313 Gm7361-201ENSMUST00000074148 2995 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
PrkdcP97313 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
PrkdcP97313 Tmc3-203ENSMUST00000164944 3306 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
PrkdcP97313 Atp6v1a-202ENSMUST00000114666 4234 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
PrkdcP97313 Srrm4os-201ENSMUST00000126959 3360 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
PrkdcP97313 Fmr1-204ENSMUST00000114655 4199 ntAPPRIS P5 TSL 5 BASIC4.54□□□□□ -1.68
PrkdcP97313 Gm42609-201ENSMUST00000196362 3306 ntTSL 2 BASIC4.54□□□□□ -1.68
PrkdcP97313 Gm10555-201ENSMUST00000193178 1791 ntBASIC4.54□□□□□ -1.68
PrkdcP97313 Btk-202ENSMUST00000113213 2121 ntTSL 5 BASIC4.54□□□□□ -1.68
PrkdcP97313 Gm25758-201ENSMUST00000103987 129 ntBASIC4.54□□□□□ -1.68
PrkdcP97313 Gm25795-201ENSMUST00000104421 132 ntBASIC4.54□□□□□ -1.68
PrkdcP97313 Gm5725-201ENSMUST00000105195 924 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
PrkdcP97313 Gm23343-201ENSMUST00000158964 143 ntBASIC4.54□□□□□ -1.68
PrkdcP97313 Vmn1r129-201ENSMUST00000165961 924 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
PrkdcP97313 Gm8720-201ENSMUST00000168392 924 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
PrkdcP97313 Gm26570-201ENSMUST00000180672 342 ntBASIC4.54□□□□□ -1.68
PrkdcP97313 Ms4a12-201ENSMUST00000186228 792 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
PrkdcP97313 Gm19035-202ENSMUST00000194575 959 ntBASIC4.54□□□□□ -1.68
PrkdcP97313 Gm42502-201ENSMUST00000198550 1089 ntBASIC4.54□□□□□ -1.68
PrkdcP97313 AC165245.1-201ENSMUST00000214181 636 ntTSL 3 BASIC4.54□□□□□ -1.68
PrkdcP97313 Gm9321-201ENSMUST00000221179 778 ntBASIC4.54□□□□□ -1.68
PrkdcP97313 Gm36262-201ENSMUST00000223274 499 ntBASIC4.54□□□□□ -1.68
PrkdcP97313 AC156016.2-201ENSMUST00000228200 525 ntBASIC4.54□□□□□ -1.68
PrkdcP97313 Olfr486-201ENSMUST00000072035 945 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
PrkdcP97313 Olfr487-201ENSMUST00000081996 945 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
PrkdcP97313 Fam183b-202ENSMUST00000094156 567 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
PrkdcP97313 Psd4-201ENSMUST00000056641 4748 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
PrkdcP97313 Rrp7a-201ENSMUST00000018184 4363 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
PrkdcP97313 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC4.54□□□□□ -1.68
PrkdcP97313 C1s1-203ENSMUST00000160505 2946 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
PrkdcP97313 Olfr733-204ENSMUST00000216195 3669 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
PrkdcP97313 Cd300a-202ENSMUST00000106582 4645 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
PrkdcP97313 Rd3l-202ENSMUST00000185354 1541 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
PrkdcP97313 Gm28839-201ENSMUST00000189579 2171 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
PrkdcP97313 Armc4-201ENSMUST00000081275 3477 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
PrkdcP97313 Unc13d-201ENSMUST00000075036 3967 ntAPPRIS P2 TSL 5 BASIC4.53□□□□□ -1.68
PrkdcP97313 6720475M21Rik-201ENSMUST00000201755 2753 ntBASIC4.53□□□□□ -1.68
PrkdcP97313 Gm43534-201ENSMUST00000197685 2853 ntBASIC4.53□□□□□ -1.68
PrkdcP97313 Gm13887-201ENSMUST00000119009 344 ntBASIC4.53□□□□□ -1.68
PrkdcP97313 Dnajc19-ps-201ENSMUST00000120890 351 ntBASIC4.53□□□□□ -1.68
PrkdcP97313 Crem-216ENSMUST00000136961 807 ntTSL 5 BASIC4.53□□□□□ -1.68
PrkdcP97313 Gm22596-201ENSMUST00000157601 316 ntBASIC4.53□□□□□ -1.68
PrkdcP97313 Gm23050-201ENSMUST00000158775 165 ntBASIC4.53□□□□□ -1.68
PrkdcP97313 Gm26057-201ENSMUST00000178099 165 ntBASIC4.53□□□□□ -1.68
PrkdcP97313 Gm29082-201ENSMUST00000185207 448 ntTSL 5 BASIC4.53□□□□□ -1.68
PrkdcP97313 Gm29060-201ENSMUST00000185339 457 ntTSL 5 BASIC4.53□□□□□ -1.68
PrkdcP97313 Gm28887-201ENSMUST00000186065 294 ntTSL 5 BASIC4.53□□□□□ -1.68
PrkdcP97313 Gm28664-201ENSMUST00000186118 457 ntTSL 5 BASIC4.53□□□□□ -1.68
PrkdcP97313 Gm29209-201ENSMUST00000188176 457 ntTSL 5 BASIC4.53□□□□□ -1.68
PrkdcP97313 Gm29090-201ENSMUST00000188526 457 ntTSL 5 BASIC4.53□□□□□ -1.68
PrkdcP97313 Gm37322-201ENSMUST00000193409 337 ntBASIC4.53□□□□□ -1.68
PrkdcP97313 1700065J11Rik-201ENSMUST00000201560 424 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
PrkdcP97313 Gm45750-201ENSMUST00000211966 354 ntBASIC4.53□□□□□ -1.68
PrkdcP97313 Gm8863-201ENSMUST00000216630 926 ntBASIC4.53□□□□□ -1.68
PrkdcP97313 Gm46369-201ENSMUST00000221577 401 ntBASIC4.53□□□□□ -1.68
Retrieved 100 of 76,532 protein–RNA pairs in 77.1 ms