Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Gm18699-201ENSMUST00000190713 243 ntBASIC8.04□□□□□ -1.12
Hmgb1P63158 Gm37825-201ENSMUST00000193141 904 ntTSL 5 BASIC8.04□□□□□ -1.12
Hmgb1P63158 Gm44196-202ENSMUST00000204186 812 ntTSL 3 BASIC8.04□□□□□ -1.12
Hmgb1P63158 Klk1b12-ps-201ENSMUST00000206650 751 ntBASIC8.04□□□□□ -1.12
Hmgb1P63158 Gm4587-201ENSMUST00000209135 637 ntBASIC8.04□□□□□ -1.12
Hmgb1P63158 1700047O18Rik-201ENSMUST00000209738 743 ntBASIC8.04□□□□□ -1.12
Hmgb1P63158 AC163041.1-201ENSMUST00000221984 133 ntBASIC8.04□□□□□ -1.12
Hmgb1P63158 Smim15-203ENSMUST00000224361 830 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
Hmgb1P63158 Morn5-201ENSMUST00000028256 714 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Hmgb1P63158 Ppbp-201ENSMUST00000031319 1083 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Hmgb1P63158 Cwc15-201ENSMUST00000004200 1111 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Hmgb1P63158 Gm26442-201ENSMUST00000082588 153 ntBASIC8.04□□□□□ -1.12
Hmgb1P63158 H2al1j-201ENSMUST00000091180 330 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
Hmgb1P63158 Avpr1b-201ENSMUST00000027690 4023 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Hmgb1P63158 Rnase4-202ENSMUST00000169895 1460 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Hmgb1P63158 4930550L24Rik-202ENSMUST00000118305 1684 ntAPPRIS P1 TSL 3 BASIC8.04□□□□□ -1.12
Hmgb1P63158 Gm36388-201ENSMUST00000191663 1675 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Hmgb1P63158 Gm28178-201ENSMUST00000188544 2943 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Hmgb1P63158 Dcun1d1-212ENSMUST00000198389 3020 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Hmgb1P63158 Usp17ld-201ENSMUST00000073394 1987 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Hmgb1P63158 Olfr266-202ENSMUST00000213616 2195 ntAPPRIS P1 TSL 5 BASIC8.04□□□□□ -1.12
Hmgb1P63158 Gm29502-201ENSMUST00000185979 3739 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Hmgb1P63158 Ppfibp2-202ENSMUST00000098134 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC8.04□□□□□ -1.12
Hmgb1P63158 Gm37060-201ENSMUST00000194997 2397 ntBASIC8.04□□□□□ -1.12
Hmgb1P63158 Dpp10-202ENSMUST00000112606 15297 ntAPPRIS P2 TSL 1 (best) BASIC8.03□□□□□ -1.12
Hmgb1P63158 Sorbs2-220ENSMUST00000139869 4275 ntAPPRIS ALT2 TSL 1 (best) BASIC8.03□□□□□ -1.12
Hmgb1P63158 Ksr2-202ENSMUST00000180430 13125 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
Hmgb1P63158 Vmn1r181-208ENSMUST00000228842 4491 ntAPPRIS P1 BASIC8.03□□□□□ -1.12
Hmgb1P63158 Dcdc5-202ENSMUST00000122388 4957 ntBASIC8.03□□□□□ -1.12
Hmgb1P63158 Pls3-204ENSMUST00000114059 3149 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Hmgb1P63158 Gm44021-201ENSMUST00000203055 3516 ntBASIC8.03□□□□□ -1.12
Hmgb1P63158 AC162181.1-201ENSMUST00000221643 3728 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Hmgb1P63158 Olfr525-202ENSMUST00000214594 5137 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
Hmgb1P63158 Usp8-202ENSMUST00000110416 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC8.03□□□□□ -1.12
Hmgb1P63158 Tmprss11a-201ENSMUST00000101073 2657 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Hmgb1P63158 Nrg1-203ENSMUST00000207470 5415 ntAPPRIS ALT2 TSL 1 (best) BASIC8.03□□□□□ -1.12
Hmgb1P63158 Gm37147-201ENSMUST00000193756 1498 ntTSL 5 BASIC8.03□□□□□ -1.12
Hmgb1P63158 Gm498-207ENSMUST00000207630 1483 ntTSL 5 BASIC8.03□□□□□ -1.12
Hmgb1P63158 Gm12638-201ENSMUST00000119531 298 ntBASIC8.03□□□□□ -1.12
Hmgb1P63158 Gm14212-201ENSMUST00000122023 826 ntBASIC8.03□□□□□ -1.12
Hmgb1P63158 n-R5s201-201ENSMUST00000122622 116 ntBASIC8.03□□□□□ -1.12
Hmgb1P63158 Gm15511-201ENSMUST00000152570 557 ntTSL 5 BASIC8.03□□□□□ -1.12
Hmgb1P63158 Gm15392-201ENSMUST00000152863 778 ntTSL 3 BASIC8.03□□□□□ -1.12
Hmgb1P63158 Gm7418-201ENSMUST00000162120 801 ntBASIC8.03□□□□□ -1.12
Hmgb1P63158 Gm19840-201ENSMUST00000169624 882 ntBASIC8.03□□□□□ -1.12
Hmgb1P63158 Gm8893-201ENSMUST00000172146 1242 ntBASIC8.03□□□□□ -1.12
Hmgb1P63158 Gm20461-201ENSMUST00000174600 305 ntTSL 3 BASIC8.03□□□□□ -1.12
Hmgb1P63158 Gm26197-201ENSMUST00000175033 115 ntBASIC8.03□□□□□ -1.12
Hmgb1P63158 Gm4956-202ENSMUST00000178869 672 ntBASIC8.03□□□□□ -1.12
Hmgb1P63158 4930599A14Rik-201ENSMUST00000186724 387 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Hmgb1P63158 Gm28556-201ENSMUST00000187489 673 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Hmgb1P63158 4933404I11Rik-201ENSMUST00000190294 1202 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Hmgb1P63158 Gm38164-201ENSMUST00000192810 330 ntBASIC8.03□□□□□ -1.12
Hmgb1P63158 Trav7-1-201ENSMUST00000198019 337 ntAPPRIS P1 BASIC8.03□□□□□ -1.12
Hmgb1P63158 9230114K14Rik-204ENSMUST00000199805 695 ntTSL 3 BASIC8.03□□□□□ -1.12
Hmgb1P63158 Gm9038-201ENSMUST00000203400 604 ntBASIC8.03□□□□□ -1.12
Hmgb1P63158 Olfr206-202ENSMUST00000207927 1122 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
Hmgb1P63158 Gm44869-201ENSMUST00000208836 357 ntBASIC8.03□□□□□ -1.12
Hmgb1P63158 Rtp4-204ENSMUST00000211349 842 ntTSL 3 BASIC8.03□□□□□ -1.12
Hmgb1P63158 CT030709.2-201ENSMUST00000215521 399 ntTSL 5 BASIC8.03□□□□□ -1.12
Hmgb1P63158 AC124778.1-201ENSMUST00000216013 162 ntBASIC8.03□□□□□ -1.12
Hmgb1P63158 CT009738.1-201ENSMUST00000219031 809 ntBASIC8.03□□□□□ -1.12
Hmgb1P63158 9530050K03Rik-201ENSMUST00000221663 1299 ntBASIC8.03□□□□□ -1.12
Hmgb1P63158 CT010472.1-201ENSMUST00000224000 704 ntBASIC8.03□□□□□ -1.12
Hmgb1P63158 4933413J09Rik-201ENSMUST00000022427 899 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Hmgb1P63158 AC102139.1-201ENSMUST00000227000 251 ntBASIC8.03□□□□□ -1.12
Hmgb1P63158 AC121997.2-202ENSMUST00000227158 939 ntBASIC8.03□□□□□ -1.12
Hmgb1P63158 Clec4n-201ENSMUST00000024118 1229 ntAPPRIS P3 TSL 1 (best) BASIC8.03□□□□□ -1.12
Hmgb1P63158 Gm5316-201ENSMUST00000050391 270 ntBASIC8.03□□□□□ -1.12
Hmgb1P63158 Gm9801-201ENSMUST00000054860 408 ntBASIC8.03□□□□□ -1.12
Hmgb1P63158 Olfr23-201ENSMUST00000092917 978 ntAPPRIS P1 BASIC8.03□□□□□ -1.12
Hmgb1P63158 Zbtb14-202ENSMUST00000112674 3743 ntAPPRIS P1 TSL 3 BASIC8.03□□□□□ -1.12
Hmgb1P63158 Ncald-204ENSMUST00000120746 3407 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Hmgb1P63158 Birc6-204ENSMUST00000182133 14604 ntAPPRIS ALT2 TSL 5 BASIC8.03□□□□□ -1.12
Hmgb1P63158 Birc6-215ENSMUST00000182597 14649 ntAPPRIS ALT2 TSL 1 (best) BASIC8.03□□□□□ -1.12
Hmgb1P63158 Birc6-220ENSMUST00000182944 14610 ntAPPRIS ALT2 TSL 5 BASIC8.03□□□□□ -1.12
Hmgb1P63158 Olfr1183-202ENSMUST00000213115 8258 ntTSL 5 BASIC8.03□□□□□ -1.12
Hmgb1P63158 Diaph2-202ENSMUST00000113320 8196 ntAPPRIS ALT2 TSL 5 BASIC8.03□□□□□ -1.12
Hmgb1P63158 Slc6a20a-203ENSMUST00000171647 3894 ntTSL 5 BASIC8.03□□□□□ -1.12
Hmgb1P63158 Gm15097-201ENSMUST00000101180 2029 ntAPPRIS P2 TSL 5 BASIC8.03□□□□□ -1.12
Hmgb1P63158 Gm15127-201ENSMUST00000101186 2026 ntAPPRIS P2 TSL 5 BASIC8.03□□□□□ -1.12
Hmgb1P63158 Gm15091-201ENSMUST00000112740 2026 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
Hmgb1P63158 Gm15107-201ENSMUST00000112796 2028 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
Hmgb1P63158 Gm15080-201ENSMUST00000112804 2029 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Hmgb1P63158 Gm15109-201ENSMUST00000133085 2026 ntBASIC8.03□□□□□ -1.12
Hmgb1P63158 Ott-201ENSMUST00000177554 2028 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Hmgb1P63158 Ott-202ENSMUST00000177606 2028 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
Hmgb1P63158 Gm15085-201ENSMUST00000178169 2028 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Hmgb1P63158 Ott-203ENSMUST00000179348 2028 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
Hmgb1P63158 Pgbd1-202ENSMUST00000122872 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC8.03□□□□□ -1.12
Hmgb1P63158 Gm43168-201ENSMUST00000201039 1612 ntBASIC8.03□□□□□ -1.12
Hmgb1P63158 Nr2c1-203ENSMUST00000105290 3732 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Hmgb1P63158 Gm26807-201ENSMUST00000181132 4363 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Hmgb1P63158 C230057A21Rik-201ENSMUST00000194944 3331 ntBASIC8.03□□□□□ -1.12
Hmgb1P63158 Clec7a-204ENSMUST00000195589 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC8.03□□□□□ -1.12
Hmgb1P63158 AC132465.1-201ENSMUST00000219938 1307 ntBASIC8.03□□□□□ -1.12
Hmgb1P63158 Gm21781-201ENSMUST00000178920 4838 ntBASIC8.03□□□□□ -1.12
Hmgb1P63158 Gm29194-201ENSMUST00000189250 2167 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Hmgb1P63158 Vmn2r84-201ENSMUST00000094502 3034 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
Hmgb1P63158 AC122426.2-201ENSMUST00000216522 2947 ntBASIC8.02□□□□□ -1.12
Retrieved 100 of 76,532 protein–RNA pairs in 61.9 ms