Protein–RNA interactions for Protein: P59240

Nphp4, Nephrocystin-4, mousemouse

Predictions only

Length 1,425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nphp4P59240 Gm15149-201ENSMUST00000119370 360 ntBASIC9.31□□□□□ -0.92
Nphp4P59240 Gm14614-201ENSMUST00000119873 384 ntBASIC9.31□□□□□ -0.92
Nphp4P59240 Olr1-203ENSMUST00000182784 570 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Nphp4P59240 Gm43120-201ENSMUST00000196228 667 ntTSL 3 BASIC9.31□□□□□ -0.92
Nphp4P59240 Mark1-ps1-201ENSMUST00000198516 717 ntBASIC9.31□□□□□ -0.92
Nphp4P59240 Gm43762-201ENSMUST00000201521 295 ntBASIC9.31□□□□□ -0.92
Nphp4P59240 Gm18838-201ENSMUST00000204855 886 ntBASIC9.31□□□□□ -0.92
Nphp4P59240 Olfr930-201ENSMUST00000058789 1101 ntAPPRIS P1 BASIC9.31□□□□□ -0.92
Nphp4P59240 Olfr703-201ENSMUST00000098142 960 ntAPPRIS P1 BASIC9.31□□□□□ -0.92
Nphp4P59240 Abi1-202ENSMUST00000091394 3023 ntAPPRIS ALT1 TSL 5 BASIC9.3□□□□□ -0.92
Nphp4P59240 Gm5600-202ENSMUST00000211589 2331 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Nphp4P59240 Gm13769-202ENSMUST00000214797 2340 ntAPPRIS P1 TSL 3 BASIC9.3□□□□□ -0.92
Nphp4P59240 Gm32305-201ENSMUST00000221742 1899 ntTSL 5 BASIC9.3□□□□□ -0.92
Nphp4P59240 CT010514.1-201ENSMUST00000214088 2969 ntBASIC9.3□□□□□ -0.92
Nphp4P59240 Pcdh15-208ENSMUST00000125006 4863 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Nphp4P59240 Pcdh15-232ENSMUST00000177420 4878 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Nphp4P59240 Mbnl1-211ENSMUST00000192807 2906 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Nphp4P59240 Tbc1d8b-201ENSMUST00000096313 5094 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Nphp4P59240 Plec-207ENSMUST00000076442 15439 ntAPPRIS P4 TSL 1 (best) BASIC9.3□□□□□ -0.92
Nphp4P59240 Trps1-204ENSMUST00000183757 6202 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Nphp4P59240 Elmod2-201ENSMUST00000053902 4319 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Nphp4P59240 Gm42653-201ENSMUST00000200644 2839 ntBASIC9.3□□□□□ -0.92
Nphp4P59240 Nat8f4-201ENSMUST00000095757 3019 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Nphp4P59240 Plk4-202ENSMUST00000167556 2769 ntAPPRIS ALT2 TSL 5 BASIC9.3□□□□□ -0.92
Nphp4P59240 Ccdc7a-202ENSMUST00000108747 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Nphp4P59240 Cyp2j7-201ENSMUST00000162514 1515 ntAPPRIS P1 TSL 5 BASIC9.3□□□□□ -0.92
Nphp4P59240 D5Ertd577e-202ENSMUST00000202481 2469 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Nphp4P59240 Gm26079-201ENSMUST00000104066 133 ntBASIC9.3□□□□□ -0.92
Nphp4P59240 Atp6ap1l-201ENSMUST00000109541 1186 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Nphp4P59240 Gm2986-201ENSMUST00000121603 382 ntBASIC9.3□□□□□ -0.92
Nphp4P59240 Gm27507-201ENSMUST00000184199 93 ntBASIC9.3□□□□□ -0.92
Nphp4P59240 Gm29050-202ENSMUST00000190865 502 ntTSL 2 BASIC9.3□□□□□ -0.92
Nphp4P59240 4833404L02Rik-201ENSMUST00000206290 908 ntBASIC9.3□□□□□ -0.92
Nphp4P59240 Pifo-202ENSMUST00000066319 899 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Nphp4P59240 Tas2r134-201ENSMUST00000070028 898 ntAPPRIS P1 BASIC9.3□□□□□ -0.92
Nphp4P59240 Gm21731-201ENSMUST00000079524 489 ntBASIC9.3□□□□□ -0.92
Nphp4P59240 Zfp292-202ENSMUST00000098163 9941 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Nphp4P59240 Mars2-201ENSMUST00000061334 11294 ntAPPRIS P1 BASIC9.29□□□□□ -0.92
Nphp4P59240 Rapgef6-210ENSMUST00000207429 5164 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Nphp4P59240 Utp14b-ps1-201ENSMUST00000197716 2265 ntBASIC9.29□□□□□ -0.92
Nphp4P59240 Kng1-201ENSMUST00000023589 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Nphp4P59240 Ercc6-201ENSMUST00000066807 8423 ntAPPRIS P1 TSL 5 BASIC9.29□□□□□ -0.92
Nphp4P59240 Olfr180-203ENSMUST00000206168 1518 ntAPPRIS ALT2 TSL 5 BASIC9.29□□□□□ -0.92
Nphp4P59240 Entpd5-201ENSMUST00000021662 4931 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Nphp4P59240 Cd209b-201ENSMUST00000084086 2039 ntAPPRIS P4 TSL 1 (best) BASIC9.29□□□□□ -0.92
Nphp4P59240 Hnrnpa3-203ENSMUST00000111962 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Nphp4P59240 Gm28667-201ENSMUST00000189873 2171 ntBASIC9.29□□□□□ -0.92
Nphp4P59240 Trim43c-202ENSMUST00000186363 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Nphp4P59240 Ppp3cc-203ENSMUST00000228911 1836 ntAPPRIS ALT2 BASIC9.29□□□□□ -0.92
Nphp4P59240 Olfr770-204ENSMUST00000204712 1460 ntAPPRIS P1 TSL 5 BASIC9.29□□□□□ -0.92
Nphp4P59240 Sh3rf2-202ENSMUST00000074679 4444 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Nphp4P59240 Oxtr-202ENSMUST00000204027 3721 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Nphp4P59240 Gm37906-201ENSMUST00000192050 3035 ntBASIC9.29□□□□□ -0.92
Nphp4P59240 Nt5c1b-205ENSMUST00000217944 1975 ntAPPRIS ALT2 TSL 5 BASIC9.29□□□□□ -0.92
Nphp4P59240 Slc12a6-202ENSMUST00000053666 6060 ntAPPRIS ALT1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Nphp4P59240 D830026I12Rik-203ENSMUST00000151170 1607 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Nphp4P59240 Slc4a4-203ENSMUST00000130041 3335 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Nphp4P59240 Trbv23-201ENSMUST00000103279 344 ntAPPRIS ALT2 BASIC9.29□□□□□ -0.92
Nphp4P59240 Gm8648-201ENSMUST00000122457 221 ntBASIC9.29□□□□□ -0.92
Nphp4P59240 Gm14272-201ENSMUST00000133525 484 ntTSL 3 BASIC9.29□□□□□ -0.92
Nphp4P59240 Gm9064-201ENSMUST00000163579 566 ntBASIC9.29□□□□□ -0.92
Nphp4P59240 Gm17201-201ENSMUST00000167226 390 ntTSL 5 BASIC9.29□□□□□ -0.92
Nphp4P59240 Scgb2b33-201ENSMUST00000187413 334 ntBASIC9.29□□□□□ -0.92
Nphp4P59240 Gm37493-201ENSMUST00000193167 433 ntBASIC9.29□□□□□ -0.92
Nphp4P59240 Gm31925-202ENSMUST00000194266 537 ntTSL 5 BASIC9.29□□□□□ -0.92
Nphp4P59240 Igkv4-83-201ENSMUST00000196933 334 ntBASIC9.29□□□□□ -0.92
Nphp4P59240 Gm8667-201ENSMUST00000211112 449 ntBASIC9.29□□□□□ -0.92
Nphp4P59240 Gm18586-201ENSMUST00000217265 518 ntBASIC9.29□□□□□ -0.92
Nphp4P59240 AC154806.1-203ENSMUST00000227370 1032 ntBASIC9.29□□□□□ -0.92
Nphp4P59240 Prl3d3-201ENSMUST00000073601 856 ntAPPRIS P2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Nphp4P59240 Adam22-206ENSMUST00000115386 9056 ntAPPRIS ALT2 TSL 5 BASIC9.29□□□□□ -0.92
Nphp4P59240 Pira2-201ENSMUST00000108615 3462 ntAPPRIS P2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Nphp4P59240 Gm15922-201ENSMUST00000118068 3462 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Nphp4P59240 T2-201ENSMUST00000163578 1755 ntTSL 5 BASIC9.29□□□□□ -0.92
Nphp4P59240 Prkaa1-202ENSMUST00000228218 4618 ntBASIC9.29□□□□□ -0.92
Nphp4P59240 Rsad2-201ENSMUST00000020970 3782 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Nphp4P59240 Vmn1r22-201ENSMUST00000227342 3057 ntBASIC9.29□□□□□ -0.92
Nphp4P59240 Vmn1r22-204ENSMUST00000228257 3079 ntAPPRIS P1 BASIC9.29□□□□□ -0.92
Nphp4P59240 AC132465.2-201ENSMUST00000218673 2728 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Nphp4P59240 Gm15093-201ENSMUST00000179021 2022 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
Nphp4P59240 Obox4-ps28-201ENSMUST00000175654 1362 ntBASIC9.28□□□□□ -0.92
Nphp4P59240 Gm38277-201ENSMUST00000195172 1367 ntBASIC9.28□□□□□ -0.92
Nphp4P59240 Alkbh8-201ENSMUST00000053407 3603 ntAPPRIS P2 TSL 1 (best) BASIC9.28□□□□□ -0.92
Nphp4P59240 AC159195.2-201ENSMUST00000223670 3757 ntBASIC9.28□□□□□ -0.92
Nphp4P59240 Gm6811-201ENSMUST00000169389 1533 ntAPPRIS P1 BASIC9.28□□□□□ -0.92
Nphp4P59240 Sema5a-201ENSMUST00000067458 10809 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Nphp4P59240 Itch-201ENSMUST00000029126 5159 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Nphp4P59240 Gm15638-203ENSMUST00000154775 2945 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Nphp4P59240 AC159635.1-201ENSMUST00000220905 2102 ntBASIC9.28□□□□□ -0.92
Nphp4P59240 Mcmdc2-205ENSMUST00000171802 2553 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
Nphp4P59240 Zdhhc11-201ENSMUST00000091493 1460 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Nphp4P59240 Pcdh15-226ENSMUST00000151116 6287 ntAPPRIS ALT2 TSL 5 BASIC9.28□□□□□ -0.92
Nphp4P59240 Vmn1r176-204ENSMUST00000227129 2955 ntAPPRIS P1 BASIC9.28□□□□□ -0.92
Nphp4P59240 Vmn1r176-207ENSMUST00000228793 2959 ntAPPRIS P1 BASIC9.28□□□□□ -0.92
Nphp4P59240 Insl5-202ENSMUST00000106869 438 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
Nphp4P59240 Gm42674-201ENSMUST00000107330 446 ntAPPRIS P1 TSL 3 BASIC9.28□□□□□ -0.92
Nphp4P59240 Sirpb1c-205ENSMUST00000108354 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
Nphp4P59240 Mospd2-202ENSMUST00000112247 2479 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Nphp4P59240 Gm14507-201ENSMUST00000156169 347 ntTSL 2 BASIC9.28□□□□□ -0.92
Nphp4P59240 Tmbim6-203ENSMUST00000159531 939 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
Retrieved 100 of 76,532 protein–RNA pairs in 54.1 ms