Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Gm11838-201ENSMUST00000121999 231 ntBASIC7.58□□□□□ -1.2
Tpm1P58771 Gm15417-201ENSMUST00000126926 925 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Tpm1P58771 Gm15915-201ENSMUST00000147379 908 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Tpm1P58771 Gm15239-201ENSMUST00000150690 603 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Tpm1P58771 Gm23220-201ENSMUST00000158115 137 ntBASIC7.58□□□□□ -1.2
Tpm1P58771 Gm3326-201ENSMUST00000164656 1043 ntBASIC7.58□□□□□ -1.2
Tpm1P58771 Gm20655-201ENSMUST00000176132 473 ntTSL 3 BASIC7.58□□□□□ -1.2
Tpm1P58771 Gm29435-201ENSMUST00000191310 689 ntBASIC7.58□□□□□ -1.2
Tpm1P58771 Gm43590-201ENSMUST00000195987 387 ntBASIC7.58□□□□□ -1.2
Tpm1P58771 Csde1-206ENSMUST00000197488 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC7.58□□□□□ -1.2
Tpm1P58771 Gm43436-201ENSMUST00000199308 147 ntBASIC7.58□□□□□ -1.2
Tpm1P58771 Gm44971-201ENSMUST00000206192 337 ntBASIC7.58□□□□□ -1.2
Tpm1P58771 Gm31374-202ENSMUST00000214913 914 ntTSL 5 BASIC7.58□□□□□ -1.2
Tpm1P58771 AC133948.2-201ENSMUST00000217850 378 ntBASIC7.58□□□□□ -1.2
Tpm1P58771 CT009742.1-201ENSMUST00000222507 702 ntBASIC7.58□□□□□ -1.2
Tpm1P58771 AC124687.3-201ENSMUST00000222865 875 ntTSL 5 BASIC7.58□□□□□ -1.2
Tpm1P58771 Gm19154-201ENSMUST00000223330 940 ntBASIC7.58□□□□□ -1.2
Tpm1P58771 AC154687.1-201ENSMUST00000224875 677 ntBASIC7.58□□□□□ -1.2
Tpm1P58771 AC154838.3-201ENSMUST00000228876 965 ntBASIC7.58□□□□□ -1.2
Tpm1P58771 Myl12a-201ENSMUST00000024846 980 ntAPPRIS P1 TSL 2 BASIC7.58□□□□□ -1.2
Tpm1P58771 Gm28798-201ENSMUST00000186372 2161 ntTSL 5 BASIC7.58□□□□□ -1.2
Tpm1P58771 Cnot2-210ENSMUST00000168036 2693 ntTSL 5 BASIC7.58□□□□□ -1.2
Tpm1P58771 Trps1-207ENSMUST00000184885 3492 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Tpm1P58771 Gm11397-201ENSMUST00000050276 1862 ntAPPRIS P1 TSL 5 BASIC7.58□□□□□ -1.2
Tpm1P58771 Psd3-202ENSMUST00000059374 2876 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Tpm1P58771 Sulf1-202ENSMUST00000177608 5598 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Tpm1P58771 Skil-204ENSMUST00000118470 6578 ntAPPRIS ALT2 TSL 1 (best) BASIC7.57□□□□□ -1.2
Tpm1P58771 Adam4-201ENSMUST00000085319 2504 ntAPPRIS P1 BASIC7.57□□□□□ -1.2
Tpm1P58771 Gm11961-201ENSMUST00000135775 1319 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Tpm1P58771 Hrnr-201ENSMUST00000090856 10656 ntAPPRIS P2 TSL 5 BASIC7.57□□□□□ -1.2
Tpm1P58771 Vmn2r61-201ENSMUST00000166131 2598 ntAPPRIS P1 TSL 5 BASIC7.57□□□□□ -1.2
Tpm1P58771 Gm44956-201ENSMUST00000208277 2887 ntTSL 5 BASIC7.57□□□□□ -1.2
Tpm1P58771 Slc35a5-202ENSMUST00000114600 679 ntTSL 3 BASIC7.57□□□□□ -1.2
Tpm1P58771 Gm15739-201ENSMUST00000118049 872 ntBASIC7.57□□□□□ -1.2
Tpm1P58771 Gm14727-201ENSMUST00000118526 525 ntBASIC7.57□□□□□ -1.2
Tpm1P58771 Gm12944-201ENSMUST00000119262 463 ntBASIC7.57□□□□□ -1.2
Tpm1P58771 Gm14721-201ENSMUST00000121381 525 ntBASIC7.57□□□□□ -1.2
Tpm1P58771 Gm11203-201ENSMUST00000122169 741 ntBASIC7.57□□□□□ -1.2
Tpm1P58771 Gm24893-201ENSMUST00000122745 369 ntBASIC7.57□□□□□ -1.2
Tpm1P58771 Gm11739-201ENSMUST00000125269 723 ntTSL 3 BASIC7.57□□□□□ -1.2
Tpm1P58771 Zfp113-202ENSMUST00000132318 488 ntTSL 3 BASIC7.57□□□□□ -1.2
Tpm1P58771 Gm23497-201ENSMUST00000157738 130 ntBASIC7.57□□□□□ -1.2
Tpm1P58771 Gm28041-201ENSMUST00000166080 779 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Tpm1P58771 Spint4-201ENSMUST00000017454 751 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Tpm1P58771 Gm20797-201ENSMUST00000177894 383 ntBASIC7.57□□□□□ -1.2
Tpm1P58771 Mir378d-201ENSMUST00000184232 110 ntBASIC7.57□□□□□ -1.2
Tpm1P58771 Mir6357-201ENSMUST00000184246 104 ntBASIC7.57□□□□□ -1.2
Tpm1P58771 Ms4a5-202ENSMUST00000186937 816 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Tpm1P58771 Avpr1b-202ENSMUST00000190410 623 ntTSL 5 BASIC7.57□□□□□ -1.2
Tpm1P58771 Gm28492-201ENSMUST00000190899 1019 ntBASIC7.57□□□□□ -1.2
Tpm1P58771 Gm3841-201ENSMUST00000191399 451 ntBASIC7.57□□□□□ -1.2
Tpm1P58771 Gm8101-201ENSMUST00000192796 478 ntBASIC7.57□□□□□ -1.2
Tpm1P58771 U90926-202ENSMUST00000201332 524 ntAPPRIS P5 TSL 1 (best) BASIC7.57□□□□□ -1.2
Tpm1P58771 Gm44213-201ENSMUST00000204977 703 ntBASIC7.57□□□□□ -1.2
Tpm1P58771 Gm2767-201ENSMUST00000209582 473 ntBASIC7.57□□□□□ -1.2
Tpm1P58771 Gm5948-201ENSMUST00000219627 839 ntBASIC7.57□□□□□ -1.2
Tpm1P58771 Spata31-202ENSMUST00000221202 814 ntTSL 5 BASIC7.57□□□□□ -1.2
Tpm1P58771 Ube2dnl2-201ENSMUST00000062695 743 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Tpm1P58771 Ms4a5-201ENSMUST00000067673 1005 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Tpm1P58771 Gm18451-201ENSMUST00000196759 1719 ntBASIC7.57□□□□□ -1.2
Tpm1P58771 Top3b-203ENSMUST00000119787 2950 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Tpm1P58771 Foxp2-201ENSMUST00000031545 5647 ntAPPRIS P3 TSL 1 (best) BASIC7.57□□□□□ -1.2
Tpm1P58771 Gm38322-201ENSMUST00000194074 2300 ntBASIC7.57□□□□□ -1.2
Tpm1P58771 Gm20655-202ENSMUST00000181428 2946 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Tpm1P58771 Gm43421-201ENSMUST00000200044 2905 ntBASIC7.57□□□□□ -1.2
Tpm1P58771 Nxpe2-201ENSMUST00000034527 3366 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Tpm1P58771 Fam227b-202ENSMUST00000110448 1693 ntAPPRIS ALT2 TSL 5 BASIC7.57□□□□□ -1.2
Tpm1P58771 Sirpb1c-202ENSMUST00000108349 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC7.57□□□□□ -1.2
Tpm1P58771 Alkbh8-202ENSMUST00000165105 2256 ntAPPRIS P2 TSL 5 BASIC7.57□□□□□ -1.2
Tpm1P58771 Gm35028-201ENSMUST00000215400 2587 ntTSL 5 BASIC7.57□□□□□ -1.2
Tpm1P58771 Bbx-201ENSMUST00000066037 4523 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Tpm1P58771 Snrpb2-201ENSMUST00000008477 2061 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Tpm1P58771 Gm31049-201ENSMUST00000201516 1302 ntBASIC7.56□□□□□ -1.2
Tpm1P58771 AC165080.4-201ENSMUST00000213591 9507 ntTSL 5 BASIC7.56□□□□□ -1.2
Tpm1P58771 Gm10376-201ENSMUST00000100694 555 ntAPPRIS ALT2 TSL 5 BASIC7.56□□□□□ -1.2
Tpm1P58771 Gm11482-201ENSMUST00000147067 719 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Tpm1P58771 Gm24738-201ENSMUST00000158856 123 ntBASIC7.56□□□□□ -1.2
Tpm1P58771 Gm3159-201ENSMUST00000164038 997 ntAPPRIS ALT2 TSL 5 BASIC7.56□□□□□ -1.2
Tpm1P58771 Gm3127-201ENSMUST00000167839 997 ntAPPRIS ALT2 TSL 5 BASIC7.56□□□□□ -1.2
Tpm1P58771 Gm3208-201ENSMUST00000168281 427 ntBASIC7.56□□□□□ -1.2
Tpm1P58771 Pde1c-208ENSMUST00000170774 2132 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Tpm1P58771 Gm27373-201ENSMUST00000184017 184 ntBASIC7.56□□□□□ -1.2
Tpm1P58771 Gm27401-201ENSMUST00000184052 173 ntBASIC7.56□□□□□ -1.2
Tpm1P58771 AV026068-205ENSMUST00000186386 762 ntTSL 5 BASIC7.56□□□□□ -1.2
Tpm1P58771 Gm5244-202ENSMUST00000189517 743 ntBASIC7.56□□□□□ -1.2
Tpm1P58771 Gstp3-202ENSMUST00000189808 708 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Tpm1P58771 Hax1-204ENSMUST00000197725 648 ntAPPRIS ALT2 TSL 5 BASIC7.56□□□□□ -1.2
Tpm1P58771 Gm19217-201ENSMUST00000218238 328 ntBASIC7.56□□□□□ -1.2
Tpm1P58771 AC155941.3-201ENSMUST00000218476 308 ntBASIC7.56□□□□□ -1.2
Tpm1P58771 Gm18960-201ENSMUST00000222962 713 ntBASIC7.56□□□□□ -1.2
Tpm1P58771 AC125117.2-201ENSMUST00000228344 1140 ntBASIC7.56□□□□□ -1.2
Tpm1P58771 1700049L16Rik-201ENSMUST00000049520 543 ntBASIC7.56□□□□□ -1.2
Tpm1P58771 Olfr683-201ENSMUST00000061284 960 ntBASIC7.56□□□□□ -1.2
Tpm1P58771 Defa24-201ENSMUST00000080533 419 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Tpm1P58771 Gm6887-201ENSMUST00000080945 482 ntBASIC7.56□□□□□ -1.2
Tpm1P58771 Olfr473-201ENSMUST00000084761 933 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
Tpm1P58771 Add3-201ENSMUST00000025999 4334 ntAPPRIS P3 TSL 1 (best) BASIC7.56□□□□□ -1.2
Tpm1P58771 Gm42597-201ENSMUST00000196663 1544 ntBASIC7.56□□□□□ -1.2
Tpm1P58771 Zfp825-203ENSMUST00000221173 1549 ntAPPRIS ALT2 TSL 3 BASIC7.56□□□□□ -1.2
Tpm1P58771 AC162301.1-201ENSMUST00000228785 1542 ntBASIC7.56□□□□□ -1.2
Retrieved 100 of 76,532 protein–RNA pairs in 56 ms