Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Ap3b2-201ENSMUST00000082090 3804 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Sox1P53783 Rc3h1-202ENSMUST00000161609 11006 ntAPPRIS P2 TSL 1 (best) BASIC7.8□□□□□ -1.16
Sox1P53783 Acaca-201ENSMUST00000020843 9026 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Sox1P53783 Olfr97-203ENSMUST00000213328 2168 ntAPPRIS P1 TSL 5 BASIC7.8□□□□□ -1.16
Sox1P53783 CT009536.1-201ENSMUST00000223774 2151 ntBASIC7.8□□□□□ -1.16
Sox1P53783 Lilrb4a-203ENSMUST00000219696 1441 ntAPPRIS P5 TSL 1 (best) BASIC7.8□□□□□ -1.16
Sox1P53783 Grhl3-201ENSMUST00000105855 2789 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Sox1P53783 Gm26896-201ENSMUST00000180482 2526 ntTSL 5 BASIC7.8□□□□□ -1.16
Sox1P53783 Usp8-201ENSMUST00000028841 4145 ntAPPRIS P3 TSL 1 (best) BASIC7.8□□□□□ -1.16
Sox1P53783 Ubap2l-220ENSMUST00000199834 3494 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Sox1P53783 Tgs1-201ENSMUST00000052712 4327 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Sox1P53783 AC154634.1-201ENSMUST00000225225 2394 ntBASIC7.8□□□□□ -1.16
Sox1P53783 Olfr1414-201ENSMUST00000062353 6017 ntAPPRIS P1 TSL 2 BASIC7.8□□□□□ -1.16
Sox1P53783 Gm5601-201ENSMUST00000118909 972 ntBASIC7.8□□□□□ -1.16
Sox1P53783 Gm28053-201ENSMUST00000127537 350 ntAPPRIS P1 TSL 3 BASIC7.8□□□□□ -1.16
Sox1P53783 Gm13261-201ENSMUST00000137351 1020 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Sox1P53783 Gm24962-201ENSMUST00000157917 109 ntBASIC7.8□□□□□ -1.16
Sox1P53783 Dnajc5b-204ENSMUST00000165693 955 ntAPPRIS P1 TSL 3 BASIC7.8□□□□□ -1.16
Sox1P53783 Vmn1r-ps58-201ENSMUST00000174460 840 ntBASIC7.8□□□□□ -1.16
Sox1P53783 4831440E17Rik-201ENSMUST00000181942 1028 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Sox1P53783 Gm28237-201ENSMUST00000186563 641 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Sox1P53783 Gm29008-201ENSMUST00000189387 298 ntBASIC7.8□□□□□ -1.16
Sox1P53783 Gm37716-201ENSMUST00000193553 947 ntBASIC7.8□□□□□ -1.16
Sox1P53783 Snurf-201ENSMUST00000194059 216 ntAPPRIS P1 TSL 2 BASIC7.8□□□□□ -1.16
Sox1P53783 Selenok-ps7-201ENSMUST00000197069 283 ntBASIC7.8□□□□□ -1.16
Sox1P53783 Gm45008-201ENSMUST00000206420 493 ntBASIC7.8□□□□□ -1.16
Sox1P53783 Olfr1455-ps1-201ENSMUST00000208608 771 ntBASIC7.8□□□□□ -1.16
Sox1P53783 Gm45734-201ENSMUST00000211916 411 ntBASIC7.8□□□□□ -1.16
Sox1P53783 Gm5831-201ENSMUST00000216016 1209 ntBASIC7.8□□□□□ -1.16
Sox1P53783 Gm19217-201ENSMUST00000218238 328 ntBASIC7.8□□□□□ -1.16
Sox1P53783 AC138027.1-201ENSMUST00000218324 472 ntTSL 5 BASIC7.8□□□□□ -1.16
Sox1P53783 Gm7557-201ENSMUST00000221935 865 ntBASIC7.8□□□□□ -1.16
Sox1P53783 AC153152.2-201ENSMUST00000223165 959 ntBASIC7.8□□□□□ -1.16
Sox1P53783 Parp8-203ENSMUST00000223949 2965 ntAPPRIS P1 BASIC7.8□□□□□ -1.16
Sox1P53783 Cst8-201ENSMUST00000028931 768 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Sox1P53783 Wdr48-201ENSMUST00000036561 3845 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Sox1P53783 Olfr303-201ENSMUST00000053958 1040 ntAPPRIS P1 BASIC7.8□□□□□ -1.16
Sox1P53783 Olfr384-201ENSMUST00000072993 939 ntAPPRIS P1 BASIC7.8□□□□□ -1.16
Sox1P53783 Gm156-201ENSMUST00000095409 682 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Sox1P53783 Plscr2-201ENSMUST00000034932 1874 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Sox1P53783 Dync1i2-204ENSMUST00000112138 2466 ntAPPRIS P3 TSL 1 (best) BASIC7.8□□□□□ -1.16
Sox1P53783 Atxn7l1-213ENSMUST00000154742 3548 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Sox1P53783 Ugt1a6b-202ENSMUST00000113138 2303 ntAPPRIS P1 TSL 5 BASIC7.8□□□□□ -1.16
Sox1P53783 Wfdc5-201ENSMUST00000045127 2322 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Sox1P53783 Arsj-201ENSMUST00000093976 3859 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Sox1P53783 Dnajc6-201ENSMUST00000038207 5258 ntAPPRIS ALT2 TSL 1 (best) BASIC7.8□□□□□ -1.16
Sox1P53783 4930512H18Rik-201ENSMUST00000133752 1493 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Sox1P53783 Lcorl-201ENSMUST00000016026 4884 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Sox1P53783 Dnah9-201ENSMUST00000080665 13798 ntAPPRIS P1 TSL 5 BASIC7.8□□□□□ -1.16
Sox1P53783 Ace2-201ENSMUST00000073973 3422 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Sox1P53783 Sulf1-205ENSMUST00000186051 4563 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Sox1P53783 Atg7-202ENSMUST00000169310 3895 ntAPPRIS ALT2 TSL 1 (best) BASIC7.79□□□□□ -1.16
Sox1P53783 Tlr5-201ENSMUST00000110997 3199 ntAPPRIS P2 TSL 1 (best) BASIC7.79□□□□□ -1.16
Sox1P53783 Gm12295-201ENSMUST00000128453 3189 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Sox1P53783 Pik3cg-207ENSMUST00000220366 4660 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Sox1P53783 Tmem106b-201ENSMUST00000031556 6002 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Sox1P53783 Gm8428-201ENSMUST00000159919 1784 ntBASIC7.79□□□□□ -1.16
Sox1P53783 Cnksr3-202ENSMUST00000150282 2554 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Sox1P53783 Cd44-204ENSMUST00000111190 1412 ntAPPRIS ALT2 TSL 1 (best) BASIC7.79□□□□□ -1.16
Sox1P53783 Olfr1055-203ENSMUST00000213564 1444 ntAPPRIS P1 TSL 5 BASIC7.79□□□□□ -1.16
Sox1P53783 Tmprss11g-202ENSMUST00000140095 2314 ntAPPRIS ALT2 TSL 5 BASIC7.79□□□□□ -1.16
Sox1P53783 Spen-201ENSMUST00000078886 12082 ntAPPRIS ALT2 TSL 5 BASIC7.79□□□□□ -1.16
Sox1P53783 Fam60a-211ENSMUST00000204435 2785 ntAPPRIS P1 TSL 5 BASIC7.79□□□□□ -1.16
Sox1P53783 Grik1-202ENSMUST00000072256 3655 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Sox1P53783 Nin-211ENSMUST00000222237 9919 ntAPPRIS P4 TSL 5 BASIC7.79□□□□□ -1.16
Sox1P53783 Cenpi-202ENSMUST00000101251 3085 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Sox1P53783 Tyrp1-202ENSMUST00000102831 2623 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Sox1P53783 Sycp1-202ENSMUST00000196988 3189 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Sox1P53783 Gm10840-201ENSMUST00000100326 309 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
Sox1P53783 Gm25379-201ENSMUST00000104338 114 ntBASIC7.79□□□□□ -1.16
Sox1P53783 Mup6-201ENSMUST00000107517 926 ntAPPRIS P1 TSL 5 BASIC7.79□□□□□ -1.16
Sox1P53783 Mup6-202ENSMUST00000107520 540 ntAPPRIS P1 TSL 5 BASIC7.79□□□□□ -1.16
Sox1P53783 Gm7206-201ENSMUST00000117730 508 ntBASIC7.79□□□□□ -1.16
Sox1P53783 Gm13798-201ENSMUST00000118285 139 ntBASIC7.79□□□□□ -1.16
Sox1P53783 Gm13196-201ENSMUST00000118297 379 ntBASIC7.79□□□□□ -1.16
Sox1P53783 Gm15471-201ENSMUST00000145893 625 ntTSL 2 BASIC7.79□□□□□ -1.16
Sox1P53783 Gm44641-201ENSMUST00000152342 323 ntTSL 3 BASIC7.79□□□□□ -1.16
Sox1P53783 Gm25713-201ENSMUST00000158625 109 ntBASIC7.79□□□□□ -1.16
Sox1P53783 Mir1930-201ENSMUST00000158799 84 ntBASIC7.79□□□□□ -1.16
Sox1P53783 Gm22701-201ENSMUST00000175371 291 ntBASIC7.79□□□□□ -1.16
Sox1P53783 4930467D21Rik-202ENSMUST00000181724 570 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Sox1P53783 Gm28958-201ENSMUST00000185864 703 ntBASIC7.79□□□□□ -1.16
Sox1P53783 Gm9142-201ENSMUST00000187161 955 ntBASIC7.79□□□□□ -1.16
Sox1P53783 Trbv28-201ENSMUST00000192804 264 ntBASIC7.79□□□□□ -1.16
Sox1P53783 Gm42164-201ENSMUST00000198881 379 ntBASIC7.79□□□□□ -1.16
Sox1P53783 Olfr1542-ps1-201ENSMUST00000204175 752 ntBASIC7.79□□□□□ -1.16
Sox1P53783 A530053G22Rik-203ENSMUST00000204370 612 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Sox1P53783 Gm5317-201ENSMUST00000204445 847 ntBASIC7.79□□□□□ -1.16
Sox1P53783 Gm32281-202ENSMUST00000217220 691 ntTSL 3 BASIC7.79□□□□□ -1.16
Sox1P53783 Gm33037-201ENSMUST00000217927 642 ntTSL 3 BASIC7.79□□□□□ -1.16
Sox1P53783 Gm35035-201ENSMUST00000218838 628 ntTSL 3 BASIC7.79□□□□□ -1.16
Sox1P53783 AC154198.1-201ENSMUST00000222839 424 ntBASIC7.79□□□□□ -1.16
Sox1P53783 Gm9280-201ENSMUST00000223155 517 ntBASIC7.79□□□□□ -1.16
Sox1P53783 CT025579.4-201ENSMUST00000224598 627 ntBASIC7.79□□□□□ -1.16
Sox1P53783 AC154616.2-201ENSMUST00000227978 398 ntBASIC7.79□□□□□ -1.16
Sox1P53783 Olfr1461-201ENSMUST00000053772 939 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
Sox1P53783 Wdr83os-201ENSMUST00000079764 922 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Sox1P53783 Olfr814-201ENSMUST00000081367 933 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
Sox1P53783 Olfr1101-201ENSMUST00000099870 933 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
Sox1P53783 Gm43465-201ENSMUST00000200367 2802 ntBASIC7.79□□□□□ -1.16
Retrieved 100 of 76,532 protein–RNA pairs in 78.7 ms